Cyanobacterial nitrogenases: phylogenetic diversity, regulation and functional predictions

Detalhes bibliográficos
Autor(a) principal: Esteves-Ferreira, Alberto A.
Data de Publicação: 2016
Outros Autores: Cavalcanti, João Henrique Frota, Vaz, Marcelo Gomes Marçal Vieira, Alvarenga, Luna V., Nunes-Nesi, Adriano, Araújo, Wagner L.
Tipo de documento: Artigo
Idioma: eng
Título da fonte: LOCUS Repositório Institucional da UFV
Texto Completo: http://dx.doi.org/10.1590/1678-4685-gmb-2016-0050
http://www.locus.ufv.br/handle/123456789/12227
Resumo: Cyanobacteria is a remarkable group of prokaryotic photosynthetic microorganisms, with several genera capable of fixing atmospheric nitrogen (N2) and presenting a wide range of morphologies. Although the nitrogenase complex is not present in all cyanobacterial taxa, it is spread across several cyanobacterial strains. The nitrogenase complex has also a high theoretical potential for biofuel production, since H2 is a by-product produced during N2 fixation. In this review we discuss the significance of a relatively wide variety of cell morphologies and metabolic strategies that allow spatial and temporal separation of N2 fixation from photosynthesis in cyanobacteria. Phylogenetic reconstructions based on 16S rRNA and nifD gene sequences shed light on the evolutionary history of the two genes. Our results demonstrated that (i) sequences of genes involved in nitrogen fixation (nifD) from several morphologically distinct strains of cyanobacteria are grouped in similarity with their morphology classification and phylogeny, and (ii) nifD genes from heterocytous strains share a common ancestor. By using this data we also discuss the evolutionary importance of processes such as horizontal gene transfer and genetic duplication for nitrogenase evolution and diversification. Finally, we discuss the importance of H2 synthesis in cyanobacteria, as well as strategies and challenges to improve cyanobacterial H2 production.
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spelling Esteves-Ferreira, Alberto A.Cavalcanti, João Henrique FrotaVaz, Marcelo Gomes Marçal VieiraAlvarenga, Luna V.Nunes-Nesi, AdrianoAraújo, Wagner L.2017-10-20T10:18:55Z2017-10-20T10:18:55Z2016-12-2116784685http://dx.doi.org/10.1590/1678-4685-gmb-2016-0050http://www.locus.ufv.br/handle/123456789/12227Cyanobacteria is a remarkable group of prokaryotic photosynthetic microorganisms, with several genera capable of fixing atmospheric nitrogen (N2) and presenting a wide range of morphologies. Although the nitrogenase complex is not present in all cyanobacterial taxa, it is spread across several cyanobacterial strains. The nitrogenase complex has also a high theoretical potential for biofuel production, since H2 is a by-product produced during N2 fixation. In this review we discuss the significance of a relatively wide variety of cell morphologies and metabolic strategies that allow spatial and temporal separation of N2 fixation from photosynthesis in cyanobacteria. Phylogenetic reconstructions based on 16S rRNA and nifD gene sequences shed light on the evolutionary history of the two genes. Our results demonstrated that (i) sequences of genes involved in nitrogen fixation (nifD) from several morphologically distinct strains of cyanobacteria are grouped in similarity with their morphology classification and phylogeny, and (ii) nifD genes from heterocytous strains share a common ancestor. By using this data we also discuss the evolutionary importance of processes such as horizontal gene transfer and genetic duplication for nitrogenase evolution and diversification. Finally, we discuss the importance of H2 synthesis in cyanobacteria, as well as strategies and challenges to improve cyanobacterial H2 production.engGenetics and Molecular Biologyvol.40 n.1, 261-275, Mar 2017CyanobacteriaEvolutionHydrogenNitrogen fixationMolecular phylogenyCyanobacterial nitrogenases: phylogenetic diversity, regulation and functional predictionsinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articleapplication/pdfinfo:eu-repo/semantics/openAccessreponame:LOCUS Repositório Institucional da UFVinstname:Universidade Federal de Viçosa (UFV)instacron:UFVORIGINAL1415-4757-gmb-1678-4685-GMB-2016-0050.pdf1415-4757-gmb-1678-4685-GMB-2016-0050.pdfTexto completoapplication/pdf5035828https://locus.ufv.br//bitstream/123456789/12227/1/1415-4757-gmb-1678-4685-GMB-2016-0050.pdf69a2f9101a5ef6176dff97a68be9cf91MD51LICENSElicense.txtlicense.txttext/plain; charset=utf-81748https://locus.ufv.br//bitstream/123456789/12227/2/license.txt8a4605be74aa9ea9d79846c1fba20a33MD52THUMBNAIL1415-4757-gmb-1678-4685-GMB-2016-0050.pdf.jpg1415-4757-gmb-1678-4685-GMB-2016-0050.pdf.jpgIM Thumbnailimage/jpeg6047https://locus.ufv.br//bitstream/123456789/12227/3/1415-4757-gmb-1678-4685-GMB-2016-0050.pdf.jpgcefde30b13a7cf02e7e9db4df4596685MD53123456789/122272017-10-20 22:00:40.737oai:locus.ufv.br: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Repositório InstitucionalPUBhttps://www.locus.ufv.br/oai/requestfabiojreis@ufv.bropendoar:21452017-10-21T01:00:40LOCUS Repositório Institucional da UFV - Universidade Federal de Viçosa (UFV)false
dc.title.en.fl_str_mv Cyanobacterial nitrogenases: phylogenetic diversity, regulation and functional predictions
title Cyanobacterial nitrogenases: phylogenetic diversity, regulation and functional predictions
spellingShingle Cyanobacterial nitrogenases: phylogenetic diversity, regulation and functional predictions
Esteves-Ferreira, Alberto A.
Cyanobacteria
Evolution
Hydrogen
Nitrogen fixation
Molecular phylogeny
title_short Cyanobacterial nitrogenases: phylogenetic diversity, regulation and functional predictions
title_full Cyanobacterial nitrogenases: phylogenetic diversity, regulation and functional predictions
title_fullStr Cyanobacterial nitrogenases: phylogenetic diversity, regulation and functional predictions
title_full_unstemmed Cyanobacterial nitrogenases: phylogenetic diversity, regulation and functional predictions
title_sort Cyanobacterial nitrogenases: phylogenetic diversity, regulation and functional predictions
author Esteves-Ferreira, Alberto A.
author_facet Esteves-Ferreira, Alberto A.
Cavalcanti, João Henrique Frota
Vaz, Marcelo Gomes Marçal Vieira
Alvarenga, Luna V.
Nunes-Nesi, Adriano
Araújo, Wagner L.
author_role author
author2 Cavalcanti, João Henrique Frota
Vaz, Marcelo Gomes Marçal Vieira
Alvarenga, Luna V.
Nunes-Nesi, Adriano
Araújo, Wagner L.
author2_role author
author
author
author
author
dc.contributor.author.fl_str_mv Esteves-Ferreira, Alberto A.
Cavalcanti, João Henrique Frota
Vaz, Marcelo Gomes Marçal Vieira
Alvarenga, Luna V.
Nunes-Nesi, Adriano
Araújo, Wagner L.
dc.subject.pt-BR.fl_str_mv Cyanobacteria
Evolution
Hydrogen
Nitrogen fixation
Molecular phylogeny
topic Cyanobacteria
Evolution
Hydrogen
Nitrogen fixation
Molecular phylogeny
description Cyanobacteria is a remarkable group of prokaryotic photosynthetic microorganisms, with several genera capable of fixing atmospheric nitrogen (N2) and presenting a wide range of morphologies. Although the nitrogenase complex is not present in all cyanobacterial taxa, it is spread across several cyanobacterial strains. The nitrogenase complex has also a high theoretical potential for biofuel production, since H2 is a by-product produced during N2 fixation. In this review we discuss the significance of a relatively wide variety of cell morphologies and metabolic strategies that allow spatial and temporal separation of N2 fixation from photosynthesis in cyanobacteria. Phylogenetic reconstructions based on 16S rRNA and nifD gene sequences shed light on the evolutionary history of the two genes. Our results demonstrated that (i) sequences of genes involved in nitrogen fixation (nifD) from several morphologically distinct strains of cyanobacteria are grouped in similarity with their morphology classification and phylogeny, and (ii) nifD genes from heterocytous strains share a common ancestor. By using this data we also discuss the evolutionary importance of processes such as horizontal gene transfer and genetic duplication for nitrogenase evolution and diversification. Finally, we discuss the importance of H2 synthesis in cyanobacteria, as well as strategies and challenges to improve cyanobacterial H2 production.
publishDate 2016
dc.date.issued.fl_str_mv 2016-12-21
dc.date.accessioned.fl_str_mv 2017-10-20T10:18:55Z
dc.date.available.fl_str_mv 2017-10-20T10:18:55Z
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
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dc.identifier.uri.fl_str_mv http://dx.doi.org/10.1590/1678-4685-gmb-2016-0050
http://www.locus.ufv.br/handle/123456789/12227
dc.identifier.issn.none.fl_str_mv 16784685
identifier_str_mv 16784685
url http://dx.doi.org/10.1590/1678-4685-gmb-2016-0050
http://www.locus.ufv.br/handle/123456789/12227
dc.language.iso.fl_str_mv eng
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dc.relation.ispartofseries.pt-BR.fl_str_mv vol.40 n.1, 261-275, Mar 2017
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dc.publisher.none.fl_str_mv Genetics and Molecular Biology
publisher.none.fl_str_mv Genetics and Molecular Biology
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