Co-Infections from Zika and Chikungunya Virus in Bahia, Brazil Identified by Metagenomic Next-Generation Sequencing
Autor(a) principal: | |
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Data de Publicação: | 2016 |
Outros Autores: | , , , , , |
Tipo de documento: | Artigo |
Idioma: | eng |
Título da fonte: | Repositório Institucional da FIOCRUZ (ARCA) |
Texto Completo: | https://www.arca.fiocruz.br/handle/icict/15155 |
Resumo: | Universidade Federal da Bahia. Instituto de Ciências da Saúde. Laboratório de Virologia. Salvador, BA, Brasil. |
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Sardi, SilviaSomasekar, SnehaNaccache, Samia N.Bandeira, Antonio Carlos de AlbuquerqueTauro, Laura BeatrizCampos, Gubio SoaresChiu, Charles Y.2016-07-29T18:06:30Z2016-07-29T18:06:30Z2016SARDI, S. et al. Co-Infections from Zika and Chikungunya Virus in Bahia, Brazil Identified by Metagenomic Next-Generation Sequencing. Journal of Clinical Microbiology, p. 1-19, Jul. 2016.0095-1137https://www.arca.fiocruz.br/handle/icict/1515510.1128/JCM.00877-16engAmerican Society for MicrobiologyCo-Infections from Zika and Chikungunya Virus in Bahia, Brazil Identified by Metagenomic Next-Generation Sequencinginfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articleUniversidade Federal da Bahia. Instituto de Ciências da Saúde. Laboratório de Virologia. Salvador, BA, Brasil.University of California. Department of Laboratory Medicine. San Francisco, CA / UCSF. Abbott Viral Diagnostics and Discovery Center. San Francisco, CA, USA.University of California. Department of Laboratory Medicine. San Francisco, CA / UCSF. Abbott Viral Diagnostics and Discovery Center. San Francisco, CA, USA.Hospital Aliança. Salvador, BA, Brasil.Fundação Oswaldo Cruz. Centro de Pesquisas Gonçalo Moniz. Salvador, BA, Brasil.Universidade Federal da Bahia. Instituto de Ciências da Saúde. Laboratório de Virologia. Salvador, BA, Brasil.University of California. Department of Laboratory Medicine. San Francisco, CA, USA / UCSF. Abbott Viral Diagnostics and Discovery Center. San Francisco, CA, USA / University of California. Department of Medicine. Division of Infectious Diseases. San Francisco, CA, USA.Metagenomic next-generation sequencing (mNGS) of 15 patients with documented ZIKV infection in Bahia, Brazil from April 2015 to January 2016 identified co-infections with chikungunya virus (CHIKV) in 2 of 15 ZIKV PCR-positive cases (13.3%). While generally non-specific, the clinical presentation corresponding to these two CHIKV/ZIKV co-infections reflected infection by the virus present at higher titer. Aside from CHIKV and ZIKV, co-infections from other viral pathogens were not detected. The mNGS approach is promsiing for differential diagnosis of acute febrile illness and identification of co-infections, although targeted arbovirus screening may be sufficient in the current ZIKV outbreak setting.Chikungunya virusZika VirusVirus InfectionsArbovirusesPCRCoinfectionHumansDiagnosis, DifferentialBrazilNãoNão Publicadoinfo:eu-repo/semantics/openAccessreponame:Repositório Institucional da FIOCRUZ (ARCA)instname:Fundação Oswaldo Cruz (FIOCRUZ)instacron:FIOCRUZLICENSElicense.txtlicense.txttext/plain; charset=utf-82991https://www.arca.fiocruz.br/bitstream/icict/15155/1/license.txt5a560609d32a3863062d77ff32785d58MD51ORIGINALSardi S Co-Infections from Zika and Chikungunya Virus in Bahia, Brazil Identified by Metagenomic Next-Generation Sequencing.pdfSardi S Co-Infections from Zika and Chikungunya Virus in Bahia, Brazil Identified by Metagenomic Next-Generation Sequencing.pdfapplication/pdf1574367https://www.arca.fiocruz.br/bitstream/icict/15155/2/Sardi%20S%20Co-Infections%20from%20Zika%20and%20Chikungunya%20Virus%20in%20Bahia%2c%20Brazil%20Identified%20by%20Metagenomic%20Next-Generation%20Sequencing.pdf97b5a8257d6064c83c481a99031e93c5MD52TEXTSardi S Co-Infections from Zika and Chikungunya Virus in Bahia, Brazil Identified by Metagenomic Next-Generation Sequencing.pdf.txtSardi S Co-Infections from Zika and Chikungunya Virus in Bahia, Brazil Identified by Metagenomic Next-Generation Sequencing.pdf.txtExtracted texttext/plain35376https://www.arca.fiocruz.br/bitstream/icict/15155/3/Sardi%20S%20Co-Infections%20from%20Zika%20and%20Chikungunya%20Virus%20in%20Bahia%2c%20Brazil%20Identified%20by%20Metagenomic%20Next-Generation%20Sequencing.pdf.txta5a5e76fdd5387225427dca1f6c8a39aMD53icict/151552018-12-27 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dc.title.pt_BR.fl_str_mv |
Co-Infections from Zika and Chikungunya Virus in Bahia, Brazil Identified by Metagenomic Next-Generation Sequencing |
title |
Co-Infections from Zika and Chikungunya Virus in Bahia, Brazil Identified by Metagenomic Next-Generation Sequencing |
spellingShingle |
Co-Infections from Zika and Chikungunya Virus in Bahia, Brazil Identified by Metagenomic Next-Generation Sequencing Sardi, Silvia Chikungunya virus Zika Virus Virus Infections Arboviruses PCR Coinfection Humans Diagnosis, Differential Brazil |
title_short |
Co-Infections from Zika and Chikungunya Virus in Bahia, Brazil Identified by Metagenomic Next-Generation Sequencing |
title_full |
Co-Infections from Zika and Chikungunya Virus in Bahia, Brazil Identified by Metagenomic Next-Generation Sequencing |
title_fullStr |
Co-Infections from Zika and Chikungunya Virus in Bahia, Brazil Identified by Metagenomic Next-Generation Sequencing |
title_full_unstemmed |
Co-Infections from Zika and Chikungunya Virus in Bahia, Brazil Identified by Metagenomic Next-Generation Sequencing |
title_sort |
Co-Infections from Zika and Chikungunya Virus in Bahia, Brazil Identified by Metagenomic Next-Generation Sequencing |
author |
Sardi, Silvia |
author_facet |
Sardi, Silvia Somasekar, Sneha Naccache, Samia N. Bandeira, Antonio Carlos de Albuquerque Tauro, Laura Beatriz Campos, Gubio Soares Chiu, Charles Y. |
author_role |
author |
author2 |
Somasekar, Sneha Naccache, Samia N. Bandeira, Antonio Carlos de Albuquerque Tauro, Laura Beatriz Campos, Gubio Soares Chiu, Charles Y. |
author2_role |
author author author author author author |
dc.contributor.author.fl_str_mv |
Sardi, Silvia Somasekar, Sneha Naccache, Samia N. Bandeira, Antonio Carlos de Albuquerque Tauro, Laura Beatriz Campos, Gubio Soares Chiu, Charles Y. |
dc.subject.en.pt_BR.fl_str_mv |
Chikungunya virus Zika Virus Virus Infections Arboviruses PCR Coinfection Humans Diagnosis, Differential Brazil |
topic |
Chikungunya virus Zika Virus Virus Infections Arboviruses PCR Coinfection Humans Diagnosis, Differential Brazil |
description |
Universidade Federal da Bahia. Instituto de Ciências da Saúde. Laboratório de Virologia. Salvador, BA, Brasil. |
publishDate |
2016 |
dc.date.accessioned.fl_str_mv |
2016-07-29T18:06:30Z |
dc.date.available.fl_str_mv |
2016-07-29T18:06:30Z |
dc.date.issued.fl_str_mv |
2016 |
dc.type.status.fl_str_mv |
info:eu-repo/semantics/publishedVersion |
dc.type.driver.fl_str_mv |
info:eu-repo/semantics/article |
format |
article |
status_str |
publishedVersion |
dc.identifier.citation.fl_str_mv |
SARDI, S. et al. Co-Infections from Zika and Chikungunya Virus in Bahia, Brazil Identified by Metagenomic Next-Generation Sequencing. Journal of Clinical Microbiology, p. 1-19, Jul. 2016. |
dc.identifier.uri.fl_str_mv |
https://www.arca.fiocruz.br/handle/icict/15155 |
dc.identifier.issn.pt_BR.fl_str_mv |
0095-1137 |
dc.identifier.doi.none.fl_str_mv |
10.1128/JCM.00877-16 |
identifier_str_mv |
SARDI, S. et al. Co-Infections from Zika and Chikungunya Virus in Bahia, Brazil Identified by Metagenomic Next-Generation Sequencing. Journal of Clinical Microbiology, p. 1-19, Jul. 2016. 0095-1137 10.1128/JCM.00877-16 |
url |
https://www.arca.fiocruz.br/handle/icict/15155 |
dc.language.iso.fl_str_mv |
eng |
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eng |
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info:eu-repo/semantics/openAccess |
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openAccess |
dc.publisher.none.fl_str_mv |
American Society for Microbiology |
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American Society for Microbiology |
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reponame:Repositório Institucional da FIOCRUZ (ARCA) instname:Fundação Oswaldo Cruz (FIOCRUZ) instacron:FIOCRUZ |
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