Comparison of efficiency of distance measurement methodologies in mango (Mangifera indica) progenies based on physicochemical descriptors.

Detalhes bibliográficos
Autor(a) principal: ALVES, E. O. S.
Data de Publicação: 2012
Outros Autores: SILVA, C. B. M. C., SOUZA, A. M., SANTOS, C. A. F., LIMA NETO, F. P., CORRÊA, R. X.
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice)
Texto Completo: http://www.alice.cnptia.embrapa.br/alice/handle/doc/919302
Resumo: We investigated seven distance measures in a set of observations of physicochemical variables of mango (Mangifera indica) submitted to multivariate analyses (distance, projection and grouping). To estimate the distance measurements, five mango progeny (total of 25 genotypes) were analyzed, using six fruit hysicochemical descriptors (fruit weight, equatorial diameter, longitudinal diameter, total soluble solids in °Brix, total titratable acidity, and pH). The distance measurements were compared by the Spearman correlation test, projection in two-dimensional space and grouping efficiency. The Spearman correlation coefficients between the seven distance measurements were, except for the Mahalanobis’ generalized distance (0.41 ? rs ? 0.63), high and significant (rs ? 0.91; P < 0.001). Regardless of the origin of the distance matrix, the unweighted pair group method with arithmetic mean grouping method proved to be the most adequate. The various distance measurements and grouping methods gave different values for distortion (-116.5 ? D ? 74.5), cophenetic correlation (0.26 ? rc ? 0.76) and stress (-1.9 ? S ? 58.9). Choice of distance measurement and analysis methods influence the characterization of genetic variability, and this should be taken into account for studies of mango.
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spelling Comparison of efficiency of distance measurement methodologies in mango (Mangifera indica) progenies based on physicochemical descriptors.Análise de agrupamentoEstatística multivariadaDivergência genéticaMelhoramento genéticoMultivariate statisticsGrouping analysisMangoMangaMangifera IndicaWe investigated seven distance measures in a set of observations of physicochemical variables of mango (Mangifera indica) submitted to multivariate analyses (distance, projection and grouping). To estimate the distance measurements, five mango progeny (total of 25 genotypes) were analyzed, using six fruit hysicochemical descriptors (fruit weight, equatorial diameter, longitudinal diameter, total soluble solids in °Brix, total titratable acidity, and pH). The distance measurements were compared by the Spearman correlation test, projection in two-dimensional space and grouping efficiency. The Spearman correlation coefficients between the seven distance measurements were, except for the Mahalanobis’ generalized distance (0.41 ? rs ? 0.63), high and significant (rs ? 0.91; P < 0.001). Regardless of the origin of the distance matrix, the unweighted pair group method with arithmetic mean grouping method proved to be the most adequate. The various distance measurements and grouping methods gave different values for distortion (-116.5 ? D ? 74.5), cophenetic correlation (0.26 ? rc ? 0.76) and stress (-1.9 ? S ? 58.9). Choice of distance measurement and analysis methods influence the characterization of genetic variability, and this should be taken into account for studies of mango.E. O. S. ALVES, Universidade Estadual de Santa Cruz, Ilhéus, BA.; C. B. M. CERQUEIRA SILVA, Universidade Estadual do Sudoeste da Bahia, Itapetinga, BA.; A. M. SOUZA, Universidade Estadual do Sudoeste da Bahia, Itapetinga, BA.; CARLOS ANTONIO FERNANDES SANTOS, CPATSA; FRANCISCO PINHEIRO LIMA NETO, CPATSA; R. X. CORRÊA, Universidade Estadual de Santa Cruz, Ilhéus, BA.ALVES, E. O. S.SILVA, C. B. M. C.SOUZA, A. M.SANTOS, C. A. F.LIMA NETO, F. P.CORRÊA, R. X.2012-04-10T01:01:40Z2012-04-10T01:01:40Z2012-03-1920122018-01-26T11:11:11Zinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articleGenetics and Molecular Research, v. 11, n. 1, p. 591-596, 2012.http://www.alice.cnptia.embrapa.br/alice/handle/doc/919302enginfo:eu-repo/semantics/openAccessreponame:Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice)instname:Empresa Brasileira de Pesquisa Agropecuária (Embrapa)instacron:EMBRAPA2017-08-15T23:43:03Zoai:www.alice.cnptia.embrapa.br:doc/919302Repositório InstitucionalPUBhttps://www.alice.cnptia.embrapa.br/oai/requestopendoar:21542017-08-15T23:43:03falseRepositório InstitucionalPUBhttps://www.alice.cnptia.embrapa.br/oai/requestcg-riaa@embrapa.bropendoar:21542017-08-15T23:43:03Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice) - Empresa Brasileira de Pesquisa Agropecuária (Embrapa)false
dc.title.none.fl_str_mv Comparison of efficiency of distance measurement methodologies in mango (Mangifera indica) progenies based on physicochemical descriptors.
title Comparison of efficiency of distance measurement methodologies in mango (Mangifera indica) progenies based on physicochemical descriptors.
spellingShingle Comparison of efficiency of distance measurement methodologies in mango (Mangifera indica) progenies based on physicochemical descriptors.
ALVES, E. O. S.
Análise de agrupamento
Estatística multivariada
Divergência genética
Melhoramento genético
Multivariate statistics
Grouping analysis
Mango
Manga
Mangifera Indica
title_short Comparison of efficiency of distance measurement methodologies in mango (Mangifera indica) progenies based on physicochemical descriptors.
title_full Comparison of efficiency of distance measurement methodologies in mango (Mangifera indica) progenies based on physicochemical descriptors.
title_fullStr Comparison of efficiency of distance measurement methodologies in mango (Mangifera indica) progenies based on physicochemical descriptors.
title_full_unstemmed Comparison of efficiency of distance measurement methodologies in mango (Mangifera indica) progenies based on physicochemical descriptors.
title_sort Comparison of efficiency of distance measurement methodologies in mango (Mangifera indica) progenies based on physicochemical descriptors.
author ALVES, E. O. S.
author_facet ALVES, E. O. S.
SILVA, C. B. M. C.
SOUZA, A. M.
SANTOS, C. A. F.
LIMA NETO, F. P.
CORRÊA, R. X.
author_role author
author2 SILVA, C. B. M. C.
SOUZA, A. M.
SANTOS, C. A. F.
LIMA NETO, F. P.
CORRÊA, R. X.
author2_role author
author
author
author
author
dc.contributor.none.fl_str_mv E. O. S. ALVES, Universidade Estadual de Santa Cruz, Ilhéus, BA.; C. B. M. CERQUEIRA SILVA, Universidade Estadual do Sudoeste da Bahia, Itapetinga, BA.; A. M. SOUZA, Universidade Estadual do Sudoeste da Bahia, Itapetinga, BA.; CARLOS ANTONIO FERNANDES SANTOS, CPATSA; FRANCISCO PINHEIRO LIMA NETO, CPATSA; R. X. CORRÊA, Universidade Estadual de Santa Cruz, Ilhéus, BA.
dc.contributor.author.fl_str_mv ALVES, E. O. S.
SILVA, C. B. M. C.
SOUZA, A. M.
SANTOS, C. A. F.
LIMA NETO, F. P.
CORRÊA, R. X.
dc.subject.por.fl_str_mv Análise de agrupamento
Estatística multivariada
Divergência genética
Melhoramento genético
Multivariate statistics
Grouping analysis
Mango
Manga
Mangifera Indica
topic Análise de agrupamento
Estatística multivariada
Divergência genética
Melhoramento genético
Multivariate statistics
Grouping analysis
Mango
Manga
Mangifera Indica
description We investigated seven distance measures in a set of observations of physicochemical variables of mango (Mangifera indica) submitted to multivariate analyses (distance, projection and grouping). To estimate the distance measurements, five mango progeny (total of 25 genotypes) were analyzed, using six fruit hysicochemical descriptors (fruit weight, equatorial diameter, longitudinal diameter, total soluble solids in °Brix, total titratable acidity, and pH). The distance measurements were compared by the Spearman correlation test, projection in two-dimensional space and grouping efficiency. The Spearman correlation coefficients between the seven distance measurements were, except for the Mahalanobis’ generalized distance (0.41 ? rs ? 0.63), high and significant (rs ? 0.91; P < 0.001). Regardless of the origin of the distance matrix, the unweighted pair group method with arithmetic mean grouping method proved to be the most adequate. The various distance measurements and grouping methods gave different values for distortion (-116.5 ? D ? 74.5), cophenetic correlation (0.26 ? rc ? 0.76) and stress (-1.9 ? S ? 58.9). Choice of distance measurement and analysis methods influence the characterization of genetic variability, and this should be taken into account for studies of mango.
publishDate 2012
dc.date.none.fl_str_mv 2012-04-10T01:01:40Z
2012-04-10T01:01:40Z
2012-03-19
2012
2018-01-26T11:11:11Z
dc.type.driver.fl_str_mv info:eu-repo/semantics/publishedVersion
info:eu-repo/semantics/article
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv Genetics and Molecular Research, v. 11, n. 1, p. 591-596, 2012.
http://www.alice.cnptia.embrapa.br/alice/handle/doc/919302
identifier_str_mv Genetics and Molecular Research, v. 11, n. 1, p. 591-596, 2012.
url http://www.alice.cnptia.embrapa.br/alice/handle/doc/919302
dc.language.iso.fl_str_mv eng
language eng
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
eu_rights_str_mv openAccess
dc.source.none.fl_str_mv reponame:Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice)
instname:Empresa Brasileira de Pesquisa Agropecuária (Embrapa)
instacron:EMBRAPA
instname_str Empresa Brasileira de Pesquisa Agropecuária (Embrapa)
instacron_str EMBRAPA
institution EMBRAPA
reponame_str Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice)
collection Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice)
repository.name.fl_str_mv Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice) - Empresa Brasileira de Pesquisa Agropecuária (Embrapa)
repository.mail.fl_str_mv cg-riaa@embrapa.br
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