Characterisation of pks15/1 in clinical isolates of Mycobacterium tuberculosis from Mexico

Detalhes bibliográficos
Autor(a) principal: Zenteno-Cuevas,Roberto
Data de Publicação: 2013
Outros Autores: Silva-Hernandez,Francisco X, Mendoza-Damian,Fabiola, Ramirez-Hernandez,Maria Dolores, Vazquez-Medina,Karen, Widrobo-Garcia,Lorena, Cuellar-Sanchez,Aremy, Muniz-Salazar,Raquel, Enciso-Moreno,Leonor, Perez-Navarro,Lucia Monserrat, Enciso-Moreno,Jose Antonio
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Memórias do Instituto Oswaldo Cruz
Texto Completo: http://www.scielo.br/scielo.php?script=sci_arttext&pid=S0074-02762013000600718
Resumo: Tuberculosis (TB) is an infectocontagious respiratory disease caused by members of the Mycobacterium tuberculosis complex. A 7 base pair (bp) deletion in the locus polyketide synthase (pks)15/1 is described as polymorphic among members of the M. tuberculosis complex, enabling the identification of Euro-American, Indo-Oceanic and Asian lineages. The aim of this study was to characterise this locus in TB isolates from Mexico. One hundred twenty clinical isolates were recovered from the states of Veracruz and Estado de Mexico. We determined the nucleotide sequence of a ± 400 bp fragment of the locus pks15/1, while genotypic characterisation was performed by spoligotyping. One hundred and fifty isolates contained the 7 bp deletion, while five had the wild type locus. Lineages X (22%), LAM (18%) and T (17%) were the most frequent; only three (2%) of the isolates were identified as Beijing and two (1%) EAI-Manila. The wild type pks15/1 locus was observed in all Asian lineage isolates tested. Our results confirm the utility of locus pks15/1 as a molecular marker for identifying Asian lineages of the M. tuberculosis complex. This marker could be of great value in the epidemiological surveillance of TB, especially in countries like Mexico, where the prevalence of such lineages is unknown.
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spelling Characterisation of pks15/1 in clinical isolates of Mycobacterium tuberculosis from MexicotuberculosisW-Beijingpks15/1MexicoTuberculosis (TB) is an infectocontagious respiratory disease caused by members of the Mycobacterium tuberculosis complex. A 7 base pair (bp) deletion in the locus polyketide synthase (pks)15/1 is described as polymorphic among members of the M. tuberculosis complex, enabling the identification of Euro-American, Indo-Oceanic and Asian lineages. The aim of this study was to characterise this locus in TB isolates from Mexico. One hundred twenty clinical isolates were recovered from the states of Veracruz and Estado de Mexico. We determined the nucleotide sequence of a ± 400 bp fragment of the locus pks15/1, while genotypic characterisation was performed by spoligotyping. One hundred and fifty isolates contained the 7 bp deletion, while five had the wild type locus. Lineages X (22%), LAM (18%) and T (17%) were the most frequent; only three (2%) of the isolates were identified as Beijing and two (1%) EAI-Manila. The wild type pks15/1 locus was observed in all Asian lineage isolates tested. Our results confirm the utility of locus pks15/1 as a molecular marker for identifying Asian lineages of the M. tuberculosis complex. This marker could be of great value in the epidemiological surveillance of TB, especially in countries like Mexico, where the prevalence of such lineages is unknown.Instituto Oswaldo Cruz, Ministério da Saúde2013-09-01info:eu-repo/semantics/articleinfo:eu-repo/semantics/publishedVersiontext/htmlhttp://www.scielo.br/scielo.php?script=sci_arttext&pid=S0074-02762013000600718Memórias do Instituto Oswaldo Cruz v.108 n.6 2013reponame:Memórias do Instituto Oswaldo Cruzinstname:Fundação Oswaldo Cruzinstacron:FIOCRUZ10.1590/0074-0276108062013007info:eu-repo/semantics/openAccessZenteno-Cuevas,RobertoSilva-Hernandez,Francisco XMendoza-Damian,FabiolaRamirez-Hernandez,Maria DoloresVazquez-Medina,KarenWidrobo-Garcia,LorenaCuellar-Sanchez,AremyMuniz-Salazar,RaquelEnciso-Moreno,LeonorPerez-Navarro,Lucia MonserratEnciso-Moreno,Jose Antonioeng2020-04-25T17:51:34Zhttp://www.scielo.br/oai/scielo-oai.php0074-02761678-8060opendoar:null2020-04-26 02:19:09.831Memórias do Instituto Oswaldo Cruz - Fundação Oswaldo Cruztrue
dc.title.none.fl_str_mv Characterisation of pks15/1 in clinical isolates of Mycobacterium tuberculosis from Mexico
title Characterisation of pks15/1 in clinical isolates of Mycobacterium tuberculosis from Mexico
spellingShingle Characterisation of pks15/1 in clinical isolates of Mycobacterium tuberculosis from Mexico
Zenteno-Cuevas,Roberto
tuberculosis
W-Beijing
pks15/1
Mexico
title_short Characterisation of pks15/1 in clinical isolates of Mycobacterium tuberculosis from Mexico
title_full Characterisation of pks15/1 in clinical isolates of Mycobacterium tuberculosis from Mexico
title_fullStr Characterisation of pks15/1 in clinical isolates of Mycobacterium tuberculosis from Mexico
title_full_unstemmed Characterisation of pks15/1 in clinical isolates of Mycobacterium tuberculosis from Mexico
title_sort Characterisation of pks15/1 in clinical isolates of Mycobacterium tuberculosis from Mexico
author Zenteno-Cuevas,Roberto
author_facet Zenteno-Cuevas,Roberto
Silva-Hernandez,Francisco X
Mendoza-Damian,Fabiola
Ramirez-Hernandez,Maria Dolores
Vazquez-Medina,Karen
Widrobo-Garcia,Lorena
Cuellar-Sanchez,Aremy
Muniz-Salazar,Raquel
Enciso-Moreno,Leonor
Perez-Navarro,Lucia Monserrat
Enciso-Moreno,Jose Antonio
author_role author
author2 Silva-Hernandez,Francisco X
Mendoza-Damian,Fabiola
Ramirez-Hernandez,Maria Dolores
Vazquez-Medina,Karen
Widrobo-Garcia,Lorena
Cuellar-Sanchez,Aremy
Muniz-Salazar,Raquel
Enciso-Moreno,Leonor
Perez-Navarro,Lucia Monserrat
Enciso-Moreno,Jose Antonio
author2_role author
author
author
author
author
author
author
author
author
author
dc.contributor.author.fl_str_mv Zenteno-Cuevas,Roberto
Silva-Hernandez,Francisco X
Mendoza-Damian,Fabiola
Ramirez-Hernandez,Maria Dolores
Vazquez-Medina,Karen
Widrobo-Garcia,Lorena
Cuellar-Sanchez,Aremy
Muniz-Salazar,Raquel
Enciso-Moreno,Leonor
Perez-Navarro,Lucia Monserrat
Enciso-Moreno,Jose Antonio
dc.subject.por.fl_str_mv tuberculosis
W-Beijing
pks15/1
Mexico
topic tuberculosis
W-Beijing
pks15/1
Mexico
dc.description.none.fl_txt_mv Tuberculosis (TB) is an infectocontagious respiratory disease caused by members of the Mycobacterium tuberculosis complex. A 7 base pair (bp) deletion in the locus polyketide synthase (pks)15/1 is described as polymorphic among members of the M. tuberculosis complex, enabling the identification of Euro-American, Indo-Oceanic and Asian lineages. The aim of this study was to characterise this locus in TB isolates from Mexico. One hundred twenty clinical isolates were recovered from the states of Veracruz and Estado de Mexico. We determined the nucleotide sequence of a ± 400 bp fragment of the locus pks15/1, while genotypic characterisation was performed by spoligotyping. One hundred and fifty isolates contained the 7 bp deletion, while five had the wild type locus. Lineages X (22%), LAM (18%) and T (17%) were the most frequent; only three (2%) of the isolates were identified as Beijing and two (1%) EAI-Manila. The wild type pks15/1 locus was observed in all Asian lineage isolates tested. Our results confirm the utility of locus pks15/1 as a molecular marker for identifying Asian lineages of the M. tuberculosis complex. This marker could be of great value in the epidemiological surveillance of TB, especially in countries like Mexico, where the prevalence of such lineages is unknown.
description Tuberculosis (TB) is an infectocontagious respiratory disease caused by members of the Mycobacterium tuberculosis complex. A 7 base pair (bp) deletion in the locus polyketide synthase (pks)15/1 is described as polymorphic among members of the M. tuberculosis complex, enabling the identification of Euro-American, Indo-Oceanic and Asian lineages. The aim of this study was to characterise this locus in TB isolates from Mexico. One hundred twenty clinical isolates were recovered from the states of Veracruz and Estado de Mexico. We determined the nucleotide sequence of a ± 400 bp fragment of the locus pks15/1, while genotypic characterisation was performed by spoligotyping. One hundred and fifty isolates contained the 7 bp deletion, while five had the wild type locus. Lineages X (22%), LAM (18%) and T (17%) were the most frequent; only three (2%) of the isolates were identified as Beijing and two (1%) EAI-Manila. The wild type pks15/1 locus was observed in all Asian lineage isolates tested. Our results confirm the utility of locus pks15/1 as a molecular marker for identifying Asian lineages of the M. tuberculosis complex. This marker could be of great value in the epidemiological surveillance of TB, especially in countries like Mexico, where the prevalence of such lineages is unknown.
publishDate 2013
dc.date.none.fl_str_mv 2013-09-01
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv http://www.scielo.br/scielo.php?script=sci_arttext&pid=S0074-02762013000600718
url http://www.scielo.br/scielo.php?script=sci_arttext&pid=S0074-02762013000600718
dc.language.iso.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv 10.1590/0074-0276108062013007
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
eu_rights_str_mv openAccess
dc.format.none.fl_str_mv text/html
dc.publisher.none.fl_str_mv Instituto Oswaldo Cruz, Ministério da Saúde
publisher.none.fl_str_mv Instituto Oswaldo Cruz, Ministério da Saúde
dc.source.none.fl_str_mv Memórias do Instituto Oswaldo Cruz v.108 n.6 2013
reponame:Memórias do Instituto Oswaldo Cruz
instname:Fundação Oswaldo Cruz
instacron:FIOCRUZ
reponame_str Memórias do Instituto Oswaldo Cruz
collection Memórias do Instituto Oswaldo Cruz
instname_str Fundação Oswaldo Cruz
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repository.name.fl_str_mv Memórias do Instituto Oswaldo Cruz - Fundação Oswaldo Cruz
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