Prevalence and genetic diversity of astroviruses in children with and without diarrhea in São Luís, Maranhão, Brazil
Autor(a) principal: | |
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Data de Publicação: | 2005 |
Outros Autores: | , , , , , , , , |
Tipo de documento: | Artigo |
Idioma: | eng |
Título da fonte: | Repositório Digital do Instituto Evandro Chagas (Patuá) |
Texto Completo: | https://patua.iec.gov.br/handle/iec/3251 |
Resumo: | Human astroviruses (HAstV) have been increasingly identified as important etiological agents of acute gastroenteritis in children up to five years old. The aim of this study was to determine the prevalence and genotype diversity of HAstV in children with symptomatic and asymptomatic infections in São Luís, Maranhão, Brazil. From June 1997 to July 1999 a total of 183 fecal samples 84 from symptomatic and 99 from asymtomatic children were tested by enzyme immunoassay for HAstV. Prevalence rates were found to be 11 and 3% for symptomatic and asymptomatic children, respectively. Reverse transcription-polymerase chain reaction (RT-PCR) was carried out in 56 specimens (26 symptomatic and 20 asymptomatic) including the 12 samples that were positive by enzyme immunoassay (EIA). The overall positivity yelded by booth methods was 8% (15/184); of these, 11% (9/84) for symptomatic and 5% (5/99) for those without symptoms or signs. Sequence analysis of amplicons revealed that HAstV-1 genotype was the most prevalent, accounting for 60% of isolates. Genotypes 2, 3, 4, and 5 were also detected, as one single isolate (10%) for each type. Variations in the sequences were observed when Brazilian isolates were compared to prototype strains identified in the United Kingdom. No seasonal pattern of occurence was observed during these two years of study, and peak detection rate was observed in children aged between 3 and 6 months in the symptomatic group, and between 18 and 24 months in the controls |
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Gabbay, Yvone BenchimolLuz, Cláudia Regina N. E. daCosta, Ivete VPepino, Elielma L. CavalcanteSousa, Maisa SOliveira, Krynnssya KleinleinWanzeller, Ana Lucia MonteiroMascarenhas, Joana D'Arc PereiraLeite, José Paulo GLinhares, Alexandre da Costa2018-07-17T18:04:22Z2018-07-17T18:04:22Z2005GABBAY, Yvone Benchimol et al. Prevalence and genetic diversity of astroviruses in children with and without diarrhea in São Luís, Maranhão, Brazil. Memórias do Instituto Oswaldo Cruz, v. 100, n. 7, p. 709-714, Nov. 2005.0074-0276https://patua.iec.gov.br/handle/iec/3251Human astroviruses (HAstV) have been increasingly identified as important etiological agents of acute gastroenteritis in children up to five years old. The aim of this study was to determine the prevalence and genotype diversity of HAstV in children with symptomatic and asymptomatic infections in São Luís, Maranhão, Brazil. From June 1997 to July 1999 a total of 183 fecal samples 84 from symptomatic and 99 from asymtomatic children were tested by enzyme immunoassay for HAstV. Prevalence rates were found to be 11 and 3% for symptomatic and asymptomatic children, respectively. Reverse transcription-polymerase chain reaction (RT-PCR) was carried out in 56 specimens (26 symptomatic and 20 asymptomatic) including the 12 samples that were positive by enzyme immunoassay (EIA). The overall positivity yelded by booth methods was 8% (15/184); of these, 11% (9/84) for symptomatic and 5% (5/99) for those without symptoms or signs. Sequence analysis of amplicons revealed that HAstV-1 genotype was the most prevalent, accounting for 60% of isolates. Genotypes 2, 3, 4, and 5 were also detected, as one single isolate (10%) for each type. Variations in the sequences were observed when Brazilian isolates were compared to prototype strains identified in the United Kingdom. No seasonal pattern of occurence was observed during these two years of study, and peak detection rate was observed in children aged between 3 and 6 months in the symptomatic group, and between 18 and 24 months in the controlsIEC/SVS, IOC-Fiocruz, Funtec-PA, Pibic/CNPqMinistério da Saúde. Secretaria de Vigilância em Saúde. Instituto Evandro Chagas. Ananindeua, PA, Brasil.Hospital Universitário Materno Infantil. São Luís, MA, Brasil.Ministério da Saúde. Secretaria de Vigilância em Saúde. Instituto Evandro Chagas. Ananindeua, PA, Brasil.Ministério da Saúde. Secretaria de Vigilância em Saúde. Instituto Evandro Chagas. Ananindeua, PA, Brasil.Ministério da Saúde. Secretaria de Vigilância em Saúde. Instituto Evandro Chagas. Ananindeua, PA, Brasil.Ministério da Saúde. Secretaria de Vigilância em Saúde. Instituto Evandro Chagas. Ananindeua, PA, Brasil.Ministério da Saúde. Secretaria de Vigilância em Saúde. Instituto Evandro Chagas. Ananindeua, PA, Brasil.Ministério da Saúde. Secretaria de Vigilância em Saúde. Instituto Evandro Chagas. Ananindeua, PA, Brasil.Fundação Oswaldo Cruz. Instituto Oswaldo Cruz. Laboratório de Virologia Comparada. Rio de Janeiro, RJ, Brasil.Ministério da Saúde. Secretaria de Vigilância em Saúde. Instituto Evandro Chagas. Ananindeua, PA, Brasil.engInstituto Oswaldo CruzPrevalence and genetic diversity of astroviruses in children with and without diarrhea in São Luís, Maranhão, Brazilinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articleMamastrovirus / patogenicidadeMamastrovirus / classificaçãoInfecções por Astroviridae / diagnósticoInfecções por Astroviridae / epidemiologiaInfecções por Astroviridae / etiologiaGastroenterite / diagnósticoDiarreia InfantilSão Luís (MA)info:eu-repo/semantics/openAccessreponame:Repositório Digital do Instituto Evandro Chagas (Patuá)instname:Instituto Evandro Chagas (IEC)instacron:IECORIGINALPrevalence and genetic diversity of astroviruses in children with and without diarrhea in São Luís, Maranhão, Brazil.pdfPrevalence and genetic diversity of astroviruses in children with and without diarrhea in São Luís, Maranhão, Brazil.pdfapplication/pdf1405297https://patua.iec.gov.br/bitstreams/6a599190-2cd1-4ebd-984c-e71248e067a2/downloadef0b8c6772a011921d4c26da0476563aMD51LICENSElicense.txtlicense.txttext/plain; charset=utf-871https://patua.iec.gov.br/bitstreams/d2622e81-91dc-4c6c-9f68-250b2f325cba/download52f1732ea66fbd1123abe39f5373b797MD52TEXTPrevalence and genetic diversity of astroviruses in children with and without diarrhea in São Luís, Maranhão, Brazil.pdf.txtPrevalence and genetic diversity of astroviruses in children with and without diarrhea in São Luís, Maranhão, Brazil.pdf.txtExtracted texttext/plain29001https://patua.iec.gov.br/bitstreams/5d5862db-4467-4b8a-b6b8-781e000a3954/download880d705d9ae14fac5cd583739f456c31MD55THUMBNAILPrevalence and genetic diversity of astroviruses in children with and without diarrhea in São Luís, Maranhão, Brazil.pdf.jpgPrevalence and genetic diversity of astroviruses in children with and without diarrhea in São Luís, Maranhão, Brazil.pdf.jpgGenerated Thumbnailimage/jpeg6405https://patua.iec.gov.br/bitstreams/83f84755-e646-4caf-ba77-0b7b6c54bdec/download8aa15d4b00b9968acd359d27de0805a4MD56iec/32512022-10-20 23:17:04.357oai:patua.iec.gov.br:iec/3251https://patua.iec.gov.brRepositório InstitucionalPUBhttps://patua.iec.gov.br/oai/requestclariceneta@iec.gov.br || Biblioteca@iec.gov.bropendoar:2022-10-20T23:17:04Repositório Digital do Instituto Evandro Chagas (Patuá) - Instituto Evandro Chagas (IEC)falseVG9kb3Mgb3MgZG9jdW1lbnRvcyBkZXNzYSBjb2xlw6fDo28gc2VndWVtIGEgTGljZW7Dp2EgQ3JlYXRpdmUgY29tbW9ucy4= |
dc.title.pt_BR.fl_str_mv |
Prevalence and genetic diversity of astroviruses in children with and without diarrhea in São Luís, Maranhão, Brazil |
title |
Prevalence and genetic diversity of astroviruses in children with and without diarrhea in São Luís, Maranhão, Brazil |
spellingShingle |
Prevalence and genetic diversity of astroviruses in children with and without diarrhea in São Luís, Maranhão, Brazil Gabbay, Yvone Benchimol Mamastrovirus / patogenicidade Mamastrovirus / classificação Infecções por Astroviridae / diagnóstico Infecções por Astroviridae / epidemiologia Infecções por Astroviridae / etiologia Gastroenterite / diagnóstico Diarreia Infantil São Luís (MA) |
title_short |
Prevalence and genetic diversity of astroviruses in children with and without diarrhea in São Luís, Maranhão, Brazil |
title_full |
Prevalence and genetic diversity of astroviruses in children with and without diarrhea in São Luís, Maranhão, Brazil |
title_fullStr |
Prevalence and genetic diversity of astroviruses in children with and without diarrhea in São Luís, Maranhão, Brazil |
title_full_unstemmed |
Prevalence and genetic diversity of astroviruses in children with and without diarrhea in São Luís, Maranhão, Brazil |
title_sort |
Prevalence and genetic diversity of astroviruses in children with and without diarrhea in São Luís, Maranhão, Brazil |
author |
Gabbay, Yvone Benchimol |
author_facet |
Gabbay, Yvone Benchimol Luz, Cláudia Regina N. E. da Costa, Ivete V Pepino, Elielma L. Cavalcante Sousa, Maisa S Oliveira, Krynnssya Kleinlein Wanzeller, Ana Lucia Monteiro Mascarenhas, Joana D'Arc Pereira Leite, José Paulo G Linhares, Alexandre da Costa |
author_role |
author |
author2 |
Luz, Cláudia Regina N. E. da Costa, Ivete V Pepino, Elielma L. Cavalcante Sousa, Maisa S Oliveira, Krynnssya Kleinlein Wanzeller, Ana Lucia Monteiro Mascarenhas, Joana D'Arc Pereira Leite, José Paulo G Linhares, Alexandre da Costa |
author2_role |
author author author author author author author author author |
dc.contributor.author.fl_str_mv |
Gabbay, Yvone Benchimol Luz, Cláudia Regina N. E. da Costa, Ivete V Pepino, Elielma L. Cavalcante Sousa, Maisa S Oliveira, Krynnssya Kleinlein Wanzeller, Ana Lucia Monteiro Mascarenhas, Joana D'Arc Pereira Leite, José Paulo G Linhares, Alexandre da Costa |
dc.subject.decsPrimary.pt_BR.fl_str_mv |
Mamastrovirus / patogenicidade Mamastrovirus / classificação Infecções por Astroviridae / diagnóstico Infecções por Astroviridae / epidemiologia Infecções por Astroviridae / etiologia Gastroenterite / diagnóstico Diarreia Infantil São Luís (MA) |
topic |
Mamastrovirus / patogenicidade Mamastrovirus / classificação Infecções por Astroviridae / diagnóstico Infecções por Astroviridae / epidemiologia Infecções por Astroviridae / etiologia Gastroenterite / diagnóstico Diarreia Infantil São Luís (MA) |
description |
Human astroviruses (HAstV) have been increasingly identified as important etiological agents of acute gastroenteritis in children up to five years old. The aim of this study was to determine the prevalence and genotype diversity of HAstV in children with symptomatic and asymptomatic infections in São Luís, Maranhão, Brazil. From June 1997 to July 1999 a total of 183 fecal samples 84 from symptomatic and 99 from asymtomatic children were tested by enzyme immunoassay for HAstV. Prevalence rates were found to be 11 and 3% for symptomatic and asymptomatic children, respectively. Reverse transcription-polymerase chain reaction (RT-PCR) was carried out in 56 specimens (26 symptomatic and 20 asymptomatic) including the 12 samples that were positive by enzyme immunoassay (EIA). The overall positivity yelded by booth methods was 8% (15/184); of these, 11% (9/84) for symptomatic and 5% (5/99) for those without symptoms or signs. Sequence analysis of amplicons revealed that HAstV-1 genotype was the most prevalent, accounting for 60% of isolates. Genotypes 2, 3, 4, and 5 were also detected, as one single isolate (10%) for each type. Variations in the sequences were observed when Brazilian isolates were compared to prototype strains identified in the United Kingdom. No seasonal pattern of occurence was observed during these two years of study, and peak detection rate was observed in children aged between 3 and 6 months in the symptomatic group, and between 18 and 24 months in the controls |
publishDate |
2005 |
dc.date.issued.fl_str_mv |
2005 |
dc.date.accessioned.fl_str_mv |
2018-07-17T18:04:22Z |
dc.date.available.fl_str_mv |
2018-07-17T18:04:22Z |
dc.type.status.fl_str_mv |
info:eu-repo/semantics/publishedVersion |
dc.type.driver.fl_str_mv |
info:eu-repo/semantics/article |
format |
article |
status_str |
publishedVersion |
dc.identifier.citation.fl_str_mv |
GABBAY, Yvone Benchimol et al. Prevalence and genetic diversity of astroviruses in children with and without diarrhea in São Luís, Maranhão, Brazil. Memórias do Instituto Oswaldo Cruz, v. 100, n. 7, p. 709-714, Nov. 2005. |
dc.identifier.uri.fl_str_mv |
https://patua.iec.gov.br/handle/iec/3251 |
dc.identifier.issn.-.fl_str_mv |
0074-0276 |
identifier_str_mv |
GABBAY, Yvone Benchimol et al. Prevalence and genetic diversity of astroviruses in children with and without diarrhea in São Luís, Maranhão, Brazil. Memórias do Instituto Oswaldo Cruz, v. 100, n. 7, p. 709-714, Nov. 2005. 0074-0276 |
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https://patua.iec.gov.br/handle/iec/3251 |
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eng |
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eng |
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info:eu-repo/semantics/openAccess |
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openAccess |
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Instituto Oswaldo Cruz |
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Instituto Oswaldo Cruz |
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IEC |
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