Molecular characterization of pre-extensive drug resistant Mycobacterium tuberculosis in northeast Brazil

Detalhes bibliográficos
Autor(a) principal: Campelo, Thales Alves
Data de Publicação: 2020
Outros Autores: Lima, Luana Nepomuceno Gondim Costa, Lima, Karla Valéria Batista, Silva, Caroliny Soares, Conceição, Marília Lima da, Barreto, José Antonio Pereira, Mota, Aquiles Paulino Peres, Sancho, Soraya de Oliveira, Frota, Cristiane Cunha
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Digital do Instituto Evandro Chagas (Patuá)
Texto Completo: https://patua.iec.gov.br/handle/iec/4071
Resumo: In Fortaleza, the capital of Ceara State, Brazil, the detection rate of tuberculosis (TB) in 2018 was 65.5/100,000 inhabitants with a cure rate of 59.1%, which is higher than the country average. This study investigated the risk factors associated with drug-resistant tuberculosis (DR-TB) and identified the drug-resistance phenotype and resistance-conferring mutations. The geographic distribution of DR-TB in Fortaleza, Brazil, was also determined. From March 2017 to February 2018, 41 DR-TB isolates and 69 drug-susceptible pulmonary TB isolates were obtained from patients seen at a referral hospital in Fortaleza, Brazil. Samples were subjected to phenotypic and genetic analysis of resistance; the spatial distribution of the participants was also analyzed. Primary resistance was high (50.9%) among participants. The following risk factors for DR were identified: being female ( p = 0.03), having diabetes ( p < 0.01), history of previous TB disease ( p < 0.01), and the number of intra-domiciliary contacts ( p < 0.01). Analysis by multiplex allele-specific polymerase chain reaction detected mutations in the genes katG (65.8%) , rpoB (43.9%), inhA promoter (14.6%), and gyrA (9.8%). Sequencing identified mutations in the the genes katG (75.6%), inhA promoter (19.5%), rpoB (85.4%), and gyrA (100%). There was no mutation in the rrs gene. Spatial analysis showed DR-TB isolates distributed in areas of low socioeconomic status in the city of Fortaleza. Our results emphasized the importance of detecting resistance to TB drugs. The resistance found in the gene gyrA is of concern due to the high number of pre-extensive DR-TB cases in Fortaleza.
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spelling Campelo, Thales AlvesLima, Luana Nepomuceno Gondim CostaLima, Karla Valéria BatistaSilva, Caroliny SoaresConceição, Marília Lima daBarreto, José Antonio PereiraMota, Aquiles Paulino PeresSancho, Soraya de OliveiraFrota, Cristiane Cunha2020-03-30T17:02:34Z2020-03-30T17:02:34Z2020CAMPELO, Thales Alves et al. Molecular characterization of pre-extensive drug resistant Mycobacterium tuberculosis in northeast Brazil. Revista do Instituto de Medicina Tropical, v. 62, p. 1-10, Feb. 2020.1678-9946https://patua.iec.gov.br/handle/iec/407110.1590/s1678-9946202062004In Fortaleza, the capital of Ceara State, Brazil, the detection rate of tuberculosis (TB) in 2018 was 65.5/100,000 inhabitants with a cure rate of 59.1%, which is higher than the country average. This study investigated the risk factors associated with drug-resistant tuberculosis (DR-TB) and identified the drug-resistance phenotype and resistance-conferring mutations. The geographic distribution of DR-TB in Fortaleza, Brazil, was also determined. From March 2017 to February 2018, 41 DR-TB isolates and 69 drug-susceptible pulmonary TB isolates were obtained from patients seen at a referral hospital in Fortaleza, Brazil. Samples were subjected to phenotypic and genetic analysis of resistance; the spatial distribution of the participants was also analyzed. Primary resistance was high (50.9%) among participants. The following risk factors for DR were identified: being female ( p = 0.03), having diabetes ( p < 0.01), history of previous TB disease ( p < 0.01), and the number of intra-domiciliary contacts ( p < 0.01). Analysis by multiplex allele-specific polymerase chain reaction detected mutations in the genes katG (65.8%) , rpoB (43.9%), inhA promoter (14.6%), and gyrA (9.8%). Sequencing identified mutations in the the genes katG (75.6%), inhA promoter (19.5%), rpoB (85.4%), and gyrA (100%). There was no mutation in the rrs gene. Spatial analysis showed DR-TB isolates distributed in areas of low socioeconomic status in the city of Fortaleza. Our results emphasized the importance of detecting resistance to TB drugs. The resistance found in the gene gyrA is of concern due to the high number of pre-extensive DR-TB cases in Fortaleza.This work was supported by Fundação Cearense de Apoio ao Desenvolvimento Científico e Tecnológico - FUNCAP (grant Nº 178638234); and the Coordenação de Aperfeiçoamento de Pessoal de Nível Superior - Brasil (CAPES) - Finance Code 001.Universidade Federal do Ceará. Faculdade de Medicina. Departamento de Patologia e Medicina Legal. Fortaleza, CE, Brazil.Ministério da Saúde. Secretaria de Vigilância em Saúde. Instituto Evandro Chagas. Ananindeua, PA, Brasil / Universidade do Estado do Pará. Programa de Pós-Graduação em Biologia Parasitária na Amazônia. Belém, PA, Brazil.Universidade Federal do Ceará. Faculdade de Medicina. Departamento de Patologia e Medicina Legal. Fortaleza, CE, Brazil.Universidade do Estado do Pará. Programa de Pós-Graduação em Biologia Parasitária na Amazônia. Belém, PA, Brazil.Secretaria de Saúde do Município de Fortaleza. Fortaleza, CE, Brazil.Universidade Federal do Ceará. Faculdade de Medicina. Departamento de Patologia e Medicina Legal. Fortaleza, CE, Brazil.Universidade Federal do Ceará. Faculdade de Medicina. Departamento de Patologia e Medicina Legal. Fortaleza, CE, Brazil.Universidade Federal do Ceará. Faculdade de Medicina. Departamento de Patologia e Medicina Legal. Fortaleza, CE, Brazil.Ministério da Saúde. Secretaria de Vigilância em Saúde. Instituto Evandro Chagas. Ananindeua, PA, Brasil / Universidade do Estado do Pará. Programa de Pós-Graduação em Biologia Parasitária na Amazônia. Belém, PA, Brazil.engUniversidade de São PauloMolecular characterization of pre-extensive drug resistant Mycobacterium tuberculosis in northeast Brazilinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articleTuberculose / diagnósticoTuberculose / tratamento farmacológicoFatores de RiscoTuberculose Resistente a Múltiplos MedicamentosResistência Microbiana a Medicamentos / imunologiaMycobacterium tuberculosis / isolamento & purificaçãoFortaleza (CE)info:eu-repo/semantics/openAccessreponame:Repositório Digital do Instituto Evandro Chagas (Patuá)instname:Instituto Evandro Chagas (IEC)instacron:IECORIGINALMolecular characterization of pre-extensive drug resistant Mycobacterium tuberculosis in northeast Brazil.pdfMolecular characterization of pre-extensive drug resistant Mycobacterium tuberculosis in northeast Brazil.pdfapplication/pdf578436https://patua.iec.gov.br/bitstreams/d5d27439-1cb3-4a1a-ac9a-538e32fd92f4/downloadcef6da061e09a7624fb8b3949f8beb18MD51LICENSElicense.txtlicense.txttext/plain; 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dc.title.pt_BR.fl_str_mv Molecular characterization of pre-extensive drug resistant Mycobacterium tuberculosis in northeast Brazil
title Molecular characterization of pre-extensive drug resistant Mycobacterium tuberculosis in northeast Brazil
spellingShingle Molecular characterization of pre-extensive drug resistant Mycobacterium tuberculosis in northeast Brazil
Campelo, Thales Alves
Tuberculose / diagnóstico
Tuberculose / tratamento farmacológico
Fatores de Risco
Tuberculose Resistente a Múltiplos Medicamentos
Resistência Microbiana a Medicamentos / imunologia
Mycobacterium tuberculosis / isolamento & purificação
Fortaleza (CE)
title_short Molecular characterization of pre-extensive drug resistant Mycobacterium tuberculosis in northeast Brazil
title_full Molecular characterization of pre-extensive drug resistant Mycobacterium tuberculosis in northeast Brazil
title_fullStr Molecular characterization of pre-extensive drug resistant Mycobacterium tuberculosis in northeast Brazil
title_full_unstemmed Molecular characterization of pre-extensive drug resistant Mycobacterium tuberculosis in northeast Brazil
title_sort Molecular characterization of pre-extensive drug resistant Mycobacterium tuberculosis in northeast Brazil
author Campelo, Thales Alves
author_facet Campelo, Thales Alves
Lima, Luana Nepomuceno Gondim Costa
Lima, Karla Valéria Batista
Silva, Caroliny Soares
Conceição, Marília Lima da
Barreto, José Antonio Pereira
Mota, Aquiles Paulino Peres
Sancho, Soraya de Oliveira
Frota, Cristiane Cunha
author_role author
author2 Lima, Luana Nepomuceno Gondim Costa
Lima, Karla Valéria Batista
Silva, Caroliny Soares
Conceição, Marília Lima da
Barreto, José Antonio Pereira
Mota, Aquiles Paulino Peres
Sancho, Soraya de Oliveira
Frota, Cristiane Cunha
author2_role author
author
author
author
author
author
author
author
dc.contributor.author.fl_str_mv Campelo, Thales Alves
Lima, Luana Nepomuceno Gondim Costa
Lima, Karla Valéria Batista
Silva, Caroliny Soares
Conceição, Marília Lima da
Barreto, José Antonio Pereira
Mota, Aquiles Paulino Peres
Sancho, Soraya de Oliveira
Frota, Cristiane Cunha
dc.subject.decsPrimary.pt_BR.fl_str_mv Tuberculose / diagnóstico
Tuberculose / tratamento farmacológico
Fatores de Risco
topic Tuberculose / diagnóstico
Tuberculose / tratamento farmacológico
Fatores de Risco
Tuberculose Resistente a Múltiplos Medicamentos
Resistência Microbiana a Medicamentos / imunologia
Mycobacterium tuberculosis / isolamento & purificação
Fortaleza (CE)
dc.subject.decsPrimary.pt-BR.fl_str_mv Tuberculose Resistente a Múltiplos Medicamentos
Resistência Microbiana a Medicamentos / imunologia
Mycobacterium tuberculosis / isolamento & purificação
Fortaleza (CE)
description In Fortaleza, the capital of Ceara State, Brazil, the detection rate of tuberculosis (TB) in 2018 was 65.5/100,000 inhabitants with a cure rate of 59.1%, which is higher than the country average. This study investigated the risk factors associated with drug-resistant tuberculosis (DR-TB) and identified the drug-resistance phenotype and resistance-conferring mutations. The geographic distribution of DR-TB in Fortaleza, Brazil, was also determined. From March 2017 to February 2018, 41 DR-TB isolates and 69 drug-susceptible pulmonary TB isolates were obtained from patients seen at a referral hospital in Fortaleza, Brazil. Samples were subjected to phenotypic and genetic analysis of resistance; the spatial distribution of the participants was also analyzed. Primary resistance was high (50.9%) among participants. The following risk factors for DR were identified: being female ( p = 0.03), having diabetes ( p < 0.01), history of previous TB disease ( p < 0.01), and the number of intra-domiciliary contacts ( p < 0.01). Analysis by multiplex allele-specific polymerase chain reaction detected mutations in the genes katG (65.8%) , rpoB (43.9%), inhA promoter (14.6%), and gyrA (9.8%). Sequencing identified mutations in the the genes katG (75.6%), inhA promoter (19.5%), rpoB (85.4%), and gyrA (100%). There was no mutation in the rrs gene. Spatial analysis showed DR-TB isolates distributed in areas of low socioeconomic status in the city of Fortaleza. Our results emphasized the importance of detecting resistance to TB drugs. The resistance found in the gene gyrA is of concern due to the high number of pre-extensive DR-TB cases in Fortaleza.
publishDate 2020
dc.date.accessioned.fl_str_mv 2020-03-30T17:02:34Z
dc.date.available.fl_str_mv 2020-03-30T17:02:34Z
dc.date.issued.fl_str_mv 2020
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
format article
status_str publishedVersion
dc.identifier.citation.fl_str_mv CAMPELO, Thales Alves et al. Molecular characterization of pre-extensive drug resistant Mycobacterium tuberculosis in northeast Brazil. Revista do Instituto de Medicina Tropical, v. 62, p. 1-10, Feb. 2020.
dc.identifier.uri.fl_str_mv https://patua.iec.gov.br/handle/iec/4071
dc.identifier.issn.-.fl_str_mv 1678-9946
dc.identifier.doi.-.fl_str_mv 10.1590/s1678-9946202062004
identifier_str_mv CAMPELO, Thales Alves et al. Molecular characterization of pre-extensive drug resistant Mycobacterium tuberculosis in northeast Brazil. Revista do Instituto de Medicina Tropical, v. 62, p. 1-10, Feb. 2020.
1678-9946
10.1590/s1678-9946202062004
url https://patua.iec.gov.br/handle/iec/4071
dc.language.iso.fl_str_mv eng
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dc.publisher.none.fl_str_mv Universidade de São Paulo
publisher.none.fl_str_mv Universidade de São Paulo
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