Conventional and molecular typing of Salmonella typhi strains from Brazil

Detalhes bibliográficos
Autor(a) principal: QUINTAES, Bianca R.
Data de Publicação: 2002
Outros Autores: LEAL, Nilma C., REIS, Eliane M. F., FONSECA, Érica L., HOFER, Ernesto
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Revista do Instituto de Medicina Tropical de São Paulo
Texto Completo: https://www.revistas.usp.br/rimtsp/article/view/30652
Resumo: Phenotypic and genotypic characteristics of Salmonella Typhi were studied in 30 strains, isolated in different years, from some areas in Brazil. Conventional typing methods were performed by biochemical tests, Vi phage-typing scheme, and antimicrobial susceptibility test. Molecular typing methods were performed by analysis of plasmid DNA and by random amplified polymorphic DNA (RAPD-PCR). For the latter, an optimization step was performed to ensure the reproducibility of the process in genetic characterization of S. Typhi. The predominance of 76.7% of biotype I (xylose +, arabinose -) was noticed in all studied areas. Three phage types were recognized, with prominence for the phage types A (73.3%) and I+IV (23.3%). All the strains were susceptible to the drugs used. However, 36.7% of the strains contained plasmids, with predominance of the 105 Kb plasmid. RAPD was capable of grouping the strains in 8 genotypic patterns using primer 784, in 6, using primer 787 and in 7, using primer 797. Conventional phenotypic typing methods, as well as the DNA plasmid analysis, presented nonsignificant discriminatory power; however, RAPD-PCR analysis showed discriminatory power, reproducibility, easy interpretation and performance, being considered as a promising alternative typing method for S. Typhi.
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spelling Conventional and molecular typing of Salmonella typhi strains from Brazil Métodos convencionais e moleculares para tipagem de Salmonella Typhi isoladas no Brasil TypingSalmonella TyphiVi Phage-typingRandom Amplified Polymorphic DNA-Polymerase Chain ReactionBrazil Phenotypic and genotypic characteristics of Salmonella Typhi were studied in 30 strains, isolated in different years, from some areas in Brazil. Conventional typing methods were performed by biochemical tests, Vi phage-typing scheme, and antimicrobial susceptibility test. Molecular typing methods were performed by analysis of plasmid DNA and by random amplified polymorphic DNA (RAPD-PCR). For the latter, an optimization step was performed to ensure the reproducibility of the process in genetic characterization of S. Typhi. The predominance of 76.7% of biotype I (xylose +, arabinose -) was noticed in all studied areas. Three phage types were recognized, with prominence for the phage types A (73.3%) and I+IV (23.3%). All the strains were susceptible to the drugs used. However, 36.7% of the strains contained plasmids, with predominance of the 105 Kb plasmid. RAPD was capable of grouping the strains in 8 genotypic patterns using primer 784, in 6, using primer 787 and in 7, using primer 797. Conventional phenotypic typing methods, as well as the DNA plasmid analysis, presented nonsignificant discriminatory power; however, RAPD-PCR analysis showed discriminatory power, reproducibility, easy interpretation and performance, being considered as a promising alternative typing method for S. Typhi. Características fenotípicas e genotípicas de Salmonella Typhi foram estudadas em 30 amostras originárias de certas regiões do Brasil e isoladas em diferentes anos. Os métodos convencionais foram realizados através da tipagem bioquímica, da fagotipagem Vi e do teste de suscetibilidade aos antimicrobianos. Os métodos moleculares foram realizados através das análises do DNA plasmidial e do DNA polimórfico amplificado aleatoriamente (RAPD-PCR). Para este último, uma etapa de otimização foi promovida para garantir a reprodutibilidade do processo na caracterização genotípica das cepas. Foi observada a predominância de 76,7% do biotipo I (xilose +, arabinose -) em todas as regiões consideradas. Três fagotipos foram reconhecidos, com destaque para os fagotipos A (73,3%) e I+IV (23,3%). Todas as amostras demonstraram sensibilidade às drogas testadas. No entanto, 36,7 % das amostras evidenciaram plasmídios, predominando o de 105Kb. RAPD-PCR agrupou as amostras em 8 perfis genotípicos com o iniciador 784, em 6 perfis com o iniciador 787 e em 7, com o iniciador 797. Os métodos convencionais, bem como a análise do DNA plasmidial, não mostraram poder discriminatório significativo; entretanto, a análise por RAPD-PCR mostrou poder discriminatório, reprodutibilidade, fácil interpretação e execução, sendo considerada uma alternativa promissora na tipagem de S. Typhi. Universidade de São Paulo. Instituto de Medicina Tropical de São Paulo2002-12-01info:eu-repo/semantics/articleinfo:eu-repo/semantics/publishedVersionapplication/pdfhttps://www.revistas.usp.br/rimtsp/article/view/30652Revista do Instituto de Medicina Tropical de São Paulo; Vol. 44 No. 6 (2002); 315-319 Revista do Instituto de Medicina Tropical de São Paulo; Vol. 44 Núm. 6 (2002); 315-319 Revista do Instituto de Medicina Tropical de São Paulo; v. 44 n. 6 (2002); 315-319 1678-99460036-4665reponame:Revista do Instituto de Medicina Tropical de São Pauloinstname:Instituto de Medicina Tropical (IMT)instacron:IMTenghttps://www.revistas.usp.br/rimtsp/article/view/30652/32536Copyright (c) 2018 Revista do Instituto de Medicina Tropical de São Pauloinfo:eu-repo/semantics/openAccessQUINTAES, Bianca R.LEAL, Nilma C.REIS, Eliane M. F.FONSECA, Érica L.HOFER, Ernesto2012-07-07T17:53:36Zoai:revistas.usp.br:article/30652Revistahttp://www.revistas.usp.br/rimtsp/indexPUBhttps://www.revistas.usp.br/rimtsp/oai||revimtsp@usp.br1678-99460036-4665opendoar:2022-12-13T16:51:25.513864Revista do Instituto de Medicina Tropical de São Paulo - Instituto de Medicina Tropical (IMT)true
dc.title.none.fl_str_mv Conventional and molecular typing of Salmonella typhi strains from Brazil
Métodos convencionais e moleculares para tipagem de Salmonella Typhi isoladas no Brasil
title Conventional and molecular typing of Salmonella typhi strains from Brazil
spellingShingle Conventional and molecular typing of Salmonella typhi strains from Brazil
QUINTAES, Bianca R.
Typing
Salmonella Typhi
Vi Phage-typing
Random Amplified Polymorphic DNA-Polymerase Chain Reaction
Brazil
title_short Conventional and molecular typing of Salmonella typhi strains from Brazil
title_full Conventional and molecular typing of Salmonella typhi strains from Brazil
title_fullStr Conventional and molecular typing of Salmonella typhi strains from Brazil
title_full_unstemmed Conventional and molecular typing of Salmonella typhi strains from Brazil
title_sort Conventional and molecular typing of Salmonella typhi strains from Brazil
author QUINTAES, Bianca R.
author_facet QUINTAES, Bianca R.
LEAL, Nilma C.
REIS, Eliane M. F.
FONSECA, Érica L.
HOFER, Ernesto
author_role author
author2 LEAL, Nilma C.
REIS, Eliane M. F.
FONSECA, Érica L.
HOFER, Ernesto
author2_role author
author
author
author
dc.contributor.author.fl_str_mv QUINTAES, Bianca R.
LEAL, Nilma C.
REIS, Eliane M. F.
FONSECA, Érica L.
HOFER, Ernesto
dc.subject.por.fl_str_mv Typing
Salmonella Typhi
Vi Phage-typing
Random Amplified Polymorphic DNA-Polymerase Chain Reaction
Brazil
topic Typing
Salmonella Typhi
Vi Phage-typing
Random Amplified Polymorphic DNA-Polymerase Chain Reaction
Brazil
description Phenotypic and genotypic characteristics of Salmonella Typhi were studied in 30 strains, isolated in different years, from some areas in Brazil. Conventional typing methods were performed by biochemical tests, Vi phage-typing scheme, and antimicrobial susceptibility test. Molecular typing methods were performed by analysis of plasmid DNA and by random amplified polymorphic DNA (RAPD-PCR). For the latter, an optimization step was performed to ensure the reproducibility of the process in genetic characterization of S. Typhi. The predominance of 76.7% of biotype I (xylose +, arabinose -) was noticed in all studied areas. Three phage types were recognized, with prominence for the phage types A (73.3%) and I+IV (23.3%). All the strains were susceptible to the drugs used. However, 36.7% of the strains contained plasmids, with predominance of the 105 Kb plasmid. RAPD was capable of grouping the strains in 8 genotypic patterns using primer 784, in 6, using primer 787 and in 7, using primer 797. Conventional phenotypic typing methods, as well as the DNA plasmid analysis, presented nonsignificant discriminatory power; however, RAPD-PCR analysis showed discriminatory power, reproducibility, easy interpretation and performance, being considered as a promising alternative typing method for S. Typhi.
publishDate 2002
dc.date.none.fl_str_mv 2002-12-01
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
info:eu-repo/semantics/publishedVersion
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv https://www.revistas.usp.br/rimtsp/article/view/30652
url https://www.revistas.usp.br/rimtsp/article/view/30652
dc.language.iso.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv https://www.revistas.usp.br/rimtsp/article/view/30652/32536
dc.rights.driver.fl_str_mv Copyright (c) 2018 Revista do Instituto de Medicina Tropical de São Paulo
info:eu-repo/semantics/openAccess
rights_invalid_str_mv Copyright (c) 2018 Revista do Instituto de Medicina Tropical de São Paulo
eu_rights_str_mv openAccess
dc.format.none.fl_str_mv application/pdf
dc.publisher.none.fl_str_mv Universidade de São Paulo. Instituto de Medicina Tropical de São Paulo
publisher.none.fl_str_mv Universidade de São Paulo. Instituto de Medicina Tropical de São Paulo
dc.source.none.fl_str_mv Revista do Instituto de Medicina Tropical de São Paulo; Vol. 44 No. 6 (2002); 315-319
Revista do Instituto de Medicina Tropical de São Paulo; Vol. 44 Núm. 6 (2002); 315-319
Revista do Instituto de Medicina Tropical de São Paulo; v. 44 n. 6 (2002); 315-319
1678-9946
0036-4665
reponame:Revista do Instituto de Medicina Tropical de São Paulo
instname:Instituto de Medicina Tropical (IMT)
instacron:IMT
instname_str Instituto de Medicina Tropical (IMT)
instacron_str IMT
institution IMT
reponame_str Revista do Instituto de Medicina Tropical de São Paulo
collection Revista do Instituto de Medicina Tropical de São Paulo
repository.name.fl_str_mv Revista do Instituto de Medicina Tropical de São Paulo - Instituto de Medicina Tropical (IMT)
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