Kalirin: a novel genetic risk factor for ischemic stroke

Detalhes bibliográficos
Autor(a) principal: Krug, T
Data de Publicação: 2010
Outros Autores: Manso, H, Gouveia, L, Sobral, J, Xavier, JM, Albergaria, I, Gaspar, G, Correia, M, Viana-Baptista, M, Simões, RN, Pinto, AN, Taipa, R, Ferreira, C, Fontes, JR, Silva, MR, Gabriel, JP, Matos, I, Lopes, G, Ferro, JM, Vicente, AM, Oliveira, SA
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
Texto Completo: http://hdl.handle.net/10400.23/558
Resumo: Cerebrovascular and cardiovascular diseases are the leading causes of death and disability worldwide. They are complex disorders resulting from the interplay of genetic and environmental factors, and may share several susceptibility genes. Several recent studies have implicated variants of the Kalirin (KALRN) gene with susceptibility to cardiovascular and metabolic phenotypes, but no studies have yet been performed in stroke patients. KALRN is involved, among others, in the inhibition of inducible nitric oxide synthase, in the regulation of ischemic signal transduction, and in neuronal morphogenesis, plasticity, and stability. The goal of the present study was to determine whether SNPs in the KALRN region on 3q13, which includes the Ropporin gene (ROPN1), predispose to ischemic stroke (IS) in a cohort of Portuguese patients and controls. We genotyped 34 tagging SNPs in the KALRN and ROPN1 chromosomal region on 565 IS patients and 517 unrelated controls, and performed genotype imputation for 405 markers on chromosome 3. We tested the single-marker association of these SNPs with IS. One SNP (rs4499545) in the ROPN1-KALRN intergenic region and two SNPs in KALRN (rs17286604 and rs11712619) showed significant (P < 0.05) allelic and genotypic (unadjusted and adjusted for hypertension, diabetes, and ever smoking) association with IS risk. Thirty-two imputed SNPs also showed an association at P < 0.05, and actual genotyping of three of these polymorphisms (rs7620580, rs6438833, and rs11712039) validated their association. Furthermore, rs11712039 was associated with IS (0.001 < P < 0.01) in a recent well-powered genomewide association study (Ikram et al. 2009). These studies suggest that variants in the KALRN gene region constitute risk factors for stroke and that KALRN may represent a common risk factor for vascular diseases.
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spelling Kalirin: a novel genetic risk factor for ischemic strokeIsquemia CerebralFactores de Troca do Nucleotídeo GuaninaProteínas de MembranaPolimorfismo de Nucleotídeo ÚnicoProteínas Serina-Treonina QuinasesAcidente Vascular CerebralCerebrovascular and cardiovascular diseases are the leading causes of death and disability worldwide. They are complex disorders resulting from the interplay of genetic and environmental factors, and may share several susceptibility genes. Several recent studies have implicated variants of the Kalirin (KALRN) gene with susceptibility to cardiovascular and metabolic phenotypes, but no studies have yet been performed in stroke patients. KALRN is involved, among others, in the inhibition of inducible nitric oxide synthase, in the regulation of ischemic signal transduction, and in neuronal morphogenesis, plasticity, and stability. The goal of the present study was to determine whether SNPs in the KALRN region on 3q13, which includes the Ropporin gene (ROPN1), predispose to ischemic stroke (IS) in a cohort of Portuguese patients and controls. We genotyped 34 tagging SNPs in the KALRN and ROPN1 chromosomal region on 565 IS patients and 517 unrelated controls, and performed genotype imputation for 405 markers on chromosome 3. We tested the single-marker association of these SNPs with IS. One SNP (rs4499545) in the ROPN1-KALRN intergenic region and two SNPs in KALRN (rs17286604 and rs11712619) showed significant (P < 0.05) allelic and genotypic (unadjusted and adjusted for hypertension, diabetes, and ever smoking) association with IS risk. Thirty-two imputed SNPs also showed an association at P < 0.05, and actual genotyping of three of these polymorphisms (rs7620580, rs6438833, and rs11712039) validated their association. Furthermore, rs11712039 was associated with IS (0.001 < P < 0.01) in a recent well-powered genomewide association study (Ikram et al. 2009). These studies suggest that variants in the KALRN gene region constitute risk factors for stroke and that KALRN may represent a common risk factor for vascular diseases.SpringerRepositório Científico do Hospital de BragaKrug, TManso, HGouveia, LSobral, JXavier, JMAlbergaria, IGaspar, GCorreia, MViana-Baptista, MSimões, RNPinto, ANTaipa, RFerreira, CFontes, JRSilva, MRGabriel, JPMatos, ILopes, GFerro, JMVicente, AMOliveira, SA2013-12-13T11:43:17Z2010-01-01T00:00:00Z2010-01-01T00:00:00Zinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articleapplication/pdfhttp://hdl.handle.net/10400.23/558engHum Genet. 2010;127(5):513-23.info:eu-repo/semantics/openAccessreponame:Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)instname:Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãoinstacron:RCAAP2022-09-21T09:02:15Zoai:repositorio.hospitaldebraga.pt:10400.23/558Portal AgregadorONGhttps://www.rcaap.pt/oai/openaireopendoar:71602024-03-19T15:55:12.552645Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) - Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãofalse
dc.title.none.fl_str_mv Kalirin: a novel genetic risk factor for ischemic stroke
title Kalirin: a novel genetic risk factor for ischemic stroke
spellingShingle Kalirin: a novel genetic risk factor for ischemic stroke
Krug, T
Isquemia Cerebral
Factores de Troca do Nucleotídeo Guanina
Proteínas de Membrana
Polimorfismo de Nucleotídeo Único
Proteínas Serina-Treonina Quinases
Acidente Vascular Cerebral
title_short Kalirin: a novel genetic risk factor for ischemic stroke
title_full Kalirin: a novel genetic risk factor for ischemic stroke
title_fullStr Kalirin: a novel genetic risk factor for ischemic stroke
title_full_unstemmed Kalirin: a novel genetic risk factor for ischemic stroke
title_sort Kalirin: a novel genetic risk factor for ischemic stroke
author Krug, T
author_facet Krug, T
Manso, H
Gouveia, L
Sobral, J
Xavier, JM
Albergaria, I
Gaspar, G
Correia, M
Viana-Baptista, M
Simões, RN
Pinto, AN
Taipa, R
Ferreira, C
Fontes, JR
Silva, MR
Gabriel, JP
Matos, I
Lopes, G
Ferro, JM
Vicente, AM
Oliveira, SA
author_role author
author2 Manso, H
Gouveia, L
Sobral, J
Xavier, JM
Albergaria, I
Gaspar, G
Correia, M
Viana-Baptista, M
Simões, RN
Pinto, AN
Taipa, R
Ferreira, C
Fontes, JR
Silva, MR
Gabriel, JP
Matos, I
Lopes, G
Ferro, JM
Vicente, AM
Oliveira, SA
author2_role author
author
author
author
author
author
author
author
author
author
author
author
author
author
author
author
author
author
author
author
dc.contributor.none.fl_str_mv Repositório Científico do Hospital de Braga
dc.contributor.author.fl_str_mv Krug, T
Manso, H
Gouveia, L
Sobral, J
Xavier, JM
Albergaria, I
Gaspar, G
Correia, M
Viana-Baptista, M
Simões, RN
Pinto, AN
Taipa, R
Ferreira, C
Fontes, JR
Silva, MR
Gabriel, JP
Matos, I
Lopes, G
Ferro, JM
Vicente, AM
Oliveira, SA
dc.subject.por.fl_str_mv Isquemia Cerebral
Factores de Troca do Nucleotídeo Guanina
Proteínas de Membrana
Polimorfismo de Nucleotídeo Único
Proteínas Serina-Treonina Quinases
Acidente Vascular Cerebral
topic Isquemia Cerebral
Factores de Troca do Nucleotídeo Guanina
Proteínas de Membrana
Polimorfismo de Nucleotídeo Único
Proteínas Serina-Treonina Quinases
Acidente Vascular Cerebral
description Cerebrovascular and cardiovascular diseases are the leading causes of death and disability worldwide. They are complex disorders resulting from the interplay of genetic and environmental factors, and may share several susceptibility genes. Several recent studies have implicated variants of the Kalirin (KALRN) gene with susceptibility to cardiovascular and metabolic phenotypes, but no studies have yet been performed in stroke patients. KALRN is involved, among others, in the inhibition of inducible nitric oxide synthase, in the regulation of ischemic signal transduction, and in neuronal morphogenesis, plasticity, and stability. The goal of the present study was to determine whether SNPs in the KALRN region on 3q13, which includes the Ropporin gene (ROPN1), predispose to ischemic stroke (IS) in a cohort of Portuguese patients and controls. We genotyped 34 tagging SNPs in the KALRN and ROPN1 chromosomal region on 565 IS patients and 517 unrelated controls, and performed genotype imputation for 405 markers on chromosome 3. We tested the single-marker association of these SNPs with IS. One SNP (rs4499545) in the ROPN1-KALRN intergenic region and two SNPs in KALRN (rs17286604 and rs11712619) showed significant (P < 0.05) allelic and genotypic (unadjusted and adjusted for hypertension, diabetes, and ever smoking) association with IS risk. Thirty-two imputed SNPs also showed an association at P < 0.05, and actual genotyping of three of these polymorphisms (rs7620580, rs6438833, and rs11712039) validated their association. Furthermore, rs11712039 was associated with IS (0.001 < P < 0.01) in a recent well-powered genomewide association study (Ikram et al. 2009). These studies suggest that variants in the KALRN gene region constitute risk factors for stroke and that KALRN may represent a common risk factor for vascular diseases.
publishDate 2010
dc.date.none.fl_str_mv 2010-01-01T00:00:00Z
2010-01-01T00:00:00Z
2013-12-13T11:43:17Z
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv http://hdl.handle.net/10400.23/558
url http://hdl.handle.net/10400.23/558
dc.language.iso.fl_str_mv eng
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dc.relation.none.fl_str_mv Hum Genet. 2010;127(5):513-23.
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