DNA copy number profiles of gastric cancer precursor lesions

Detalhes bibliográficos
Autor(a) principal: Buffart, Tineke
Data de Publicação: 2007
Outros Autores: Carvalho, Beatriz, Mons, Thomas, Reis, R. M., Moutinho, Cátia, Silva, Paula, Grieken, Nicole C. T. van, Vieth, Michael, Stolte, Manfred, Velde, Cornelis J. H. van de, Schrock, Evelin, Matthaei, Anja, Ylstra, Bauke, Carneiro, Fátima, Meijer, Gerrit A.
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
Texto Completo: http://hdl.handle.net/1822/9159
Resumo: Chromosomal instability (CIN) is the most prevalent type of genomic instability in gastric tumours, but its role in malignant transformation of the gastric mucosa is still obscure. In the present study, we set out to study whether two morphologically distinct categories of gastric cancer precursor lesions, i.e. intestinal-type and pyloric gland adenomas, would carry different patterns of DNA copy number changes, possibly reflecting distinct genetic pathways of gastric carcinogenesis in these two adenoma types. Results: Using a 5K BAC array CGH platform, we showed that the most common aberrations shared by the 11 intestinal-type and 10 yloric gland adenomas were gains of chromosomes 9 (29%), 11q (29%) and 20 (33%), and losses of chromosomes 13q (48%), 6(48%), 5(43%) and 10 (33%). The most frequent aberrations in intestinal-type gastric adenoma were gains on 11q, 9q and 8, and losses on chromosomes 5q, 6, 10 and 13, whereas in pyloric gland gastric adenomas these were gains on chromosome 20 and losses on 5q and 6. However, no significant differences were observed between the two adenoma types. Conclusion: The results suggest that gains on chromosomes 8, 9q, 11q and 20, and losses on chromosomes 5q, 6, 10 and 13, likely represent early events in gastric carcinogenesis. The phenotypical entities, intestinal-type and pyloric gland adenomas, however, do not differ significantly (P = 0.8) at the level of DNA copy number changes.
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spelling DNA copy number profiles of gastric cancer precursor lesionsScience & TechnologyChromosomal instability (CIN) is the most prevalent type of genomic instability in gastric tumours, but its role in malignant transformation of the gastric mucosa is still obscure. In the present study, we set out to study whether two morphologically distinct categories of gastric cancer precursor lesions, i.e. intestinal-type and pyloric gland adenomas, would carry different patterns of DNA copy number changes, possibly reflecting distinct genetic pathways of gastric carcinogenesis in these two adenoma types. Results: Using a 5K BAC array CGH platform, we showed that the most common aberrations shared by the 11 intestinal-type and 10 yloric gland adenomas were gains of chromosomes 9 (29%), 11q (29%) and 20 (33%), and losses of chromosomes 13q (48%), 6(48%), 5(43%) and 10 (33%). The most frequent aberrations in intestinal-type gastric adenoma were gains on 11q, 9q and 8, and losses on chromosomes 5q, 6, 10 and 13, whereas in pyloric gland gastric adenomas these were gains on chromosome 20 and losses on 5q and 6. However, no significant differences were observed between the two adenoma types. Conclusion: The results suggest that gains on chromosomes 8, 9q, 11q and 20, and losses on chromosomes 5q, 6, 10 and 13, likely represent early events in gastric carcinogenesis. The phenotypical entities, intestinal-type and pyloric gland adenomas, however, do not differ significantly (P = 0.8) at the level of DNA copy number changes.Fundação para a Ciência e a Tecnologia (FCT)grant POCTI/CBO/41179/2001Dutch Cancer Society, grant-KWF 2004–3051BioMed Central (BMC)Universidade do MinhoBuffart, TinekeCarvalho, BeatrizMons, ThomasReis, R. M.Moutinho, CátiaSilva, PaulaGrieken, Nicole C. T. vanVieth, MichaelStolte, ManfredVelde, Cornelis J. H. van deSchrock, EvelinMatthaei, AnjaYlstra, BaukeCarneiro, FátimaMeijer, Gerrit A.2007-10-012007-10-01T00:00:00Zinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articleapplication/pdfhttp://hdl.handle.net/1822/9159eng"BMC Genomics". ISSN 1471-2164. 8 (Oct. 2007) 1-10.1471-216410.1186/1471-2164-8-34517908304http://www.biomedcentral.cominfo:eu-repo/semantics/openAccessreponame:Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)instname:Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãoinstacron:RCAAP2023-07-21T12:31:04Zoai:repositorium.sdum.uminho.pt:1822/9159Portal AgregadorONGhttps://www.rcaap.pt/oai/openaireopendoar:71602024-03-19T19:26:18.887608Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) - Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãofalse
dc.title.none.fl_str_mv DNA copy number profiles of gastric cancer precursor lesions
title DNA copy number profiles of gastric cancer precursor lesions
spellingShingle DNA copy number profiles of gastric cancer precursor lesions
Buffart, Tineke
Science & Technology
title_short DNA copy number profiles of gastric cancer precursor lesions
title_full DNA copy number profiles of gastric cancer precursor lesions
title_fullStr DNA copy number profiles of gastric cancer precursor lesions
title_full_unstemmed DNA copy number profiles of gastric cancer precursor lesions
title_sort DNA copy number profiles of gastric cancer precursor lesions
author Buffart, Tineke
author_facet Buffart, Tineke
Carvalho, Beatriz
Mons, Thomas
Reis, R. M.
Moutinho, Cátia
Silva, Paula
Grieken, Nicole C. T. van
Vieth, Michael
Stolte, Manfred
Velde, Cornelis J. H. van de
Schrock, Evelin
Matthaei, Anja
Ylstra, Bauke
Carneiro, Fátima
Meijer, Gerrit A.
author_role author
author2 Carvalho, Beatriz
Mons, Thomas
Reis, R. M.
Moutinho, Cátia
Silva, Paula
Grieken, Nicole C. T. van
Vieth, Michael
Stolte, Manfred
Velde, Cornelis J. H. van de
Schrock, Evelin
Matthaei, Anja
Ylstra, Bauke
Carneiro, Fátima
Meijer, Gerrit A.
author2_role author
author
author
author
author
author
author
author
author
author
author
author
author
author
dc.contributor.none.fl_str_mv Universidade do Minho
dc.contributor.author.fl_str_mv Buffart, Tineke
Carvalho, Beatriz
Mons, Thomas
Reis, R. M.
Moutinho, Cátia
Silva, Paula
Grieken, Nicole C. T. van
Vieth, Michael
Stolte, Manfred
Velde, Cornelis J. H. van de
Schrock, Evelin
Matthaei, Anja
Ylstra, Bauke
Carneiro, Fátima
Meijer, Gerrit A.
dc.subject.por.fl_str_mv Science & Technology
topic Science & Technology
description Chromosomal instability (CIN) is the most prevalent type of genomic instability in gastric tumours, but its role in malignant transformation of the gastric mucosa is still obscure. In the present study, we set out to study whether two morphologically distinct categories of gastric cancer precursor lesions, i.e. intestinal-type and pyloric gland adenomas, would carry different patterns of DNA copy number changes, possibly reflecting distinct genetic pathways of gastric carcinogenesis in these two adenoma types. Results: Using a 5K BAC array CGH platform, we showed that the most common aberrations shared by the 11 intestinal-type and 10 yloric gland adenomas were gains of chromosomes 9 (29%), 11q (29%) and 20 (33%), and losses of chromosomes 13q (48%), 6(48%), 5(43%) and 10 (33%). The most frequent aberrations in intestinal-type gastric adenoma were gains on 11q, 9q and 8, and losses on chromosomes 5q, 6, 10 and 13, whereas in pyloric gland gastric adenomas these were gains on chromosome 20 and losses on 5q and 6. However, no significant differences were observed between the two adenoma types. Conclusion: The results suggest that gains on chromosomes 8, 9q, 11q and 20, and losses on chromosomes 5q, 6, 10 and 13, likely represent early events in gastric carcinogenesis. The phenotypical entities, intestinal-type and pyloric gland adenomas, however, do not differ significantly (P = 0.8) at the level of DNA copy number changes.
publishDate 2007
dc.date.none.fl_str_mv 2007-10-01
2007-10-01T00:00:00Z
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv http://hdl.handle.net/1822/9159
url http://hdl.handle.net/1822/9159
dc.language.iso.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv "BMC Genomics". ISSN 1471-2164. 8 (Oct. 2007) 1-10.
1471-2164
10.1186/1471-2164-8-345
17908304
http://www.biomedcentral.com
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
eu_rights_str_mv openAccess
dc.format.none.fl_str_mv application/pdf
dc.publisher.none.fl_str_mv BioMed Central (BMC)
publisher.none.fl_str_mv BioMed Central (BMC)
dc.source.none.fl_str_mv reponame:Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
instname:Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informação
instacron:RCAAP
instname_str Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informação
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reponame_str Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
collection Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
repository.name.fl_str_mv Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) - Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informação
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