The Botryosphaeriaceae: genera and species known from culture
Autor(a) principal: | |
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Data de Publicação: | 2013 |
Outros Autores: | , , , , , |
Tipo de documento: | Artigo |
Idioma: | eng |
Título da fonte: | Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) |
Texto Completo: | http://hdl.handle.net/10773/24570 |
Resumo: | In this paper we give an account of the genera and species in the Botryosphaeriaceae. We consider morphological characters alone as inadequate to define genera or identify species, given the confusion it has repeatedly introduced in the past, their variation during development, and inevitable overlap as representation grows. Thus it seems likely that all of the older taxa linked to the Botryosphaeriaceae, and for which cultures or DNA sequence data are not available, cannot be linked to the species in this family that are known from culture. Such older taxa will have to be disregarded for future use unless they are epitypified. We therefore focus this paper on the 17 genera that can now be recognised phylogenetically, which concentrates on the species that are presently known from culture. Included is a historical overview of the family, the morphological features that define the genera and species and detailed descriptions of the 17 genera and 110 species. Keys to the genera and species are also provided. Phylogenetic relationships of the genera are given in a multi-locus tree based on combined SSU, ITS, LSU, EF1-α and β-tubulin sequences. The morphological descriptions are supplemented by phylogenetic trees (ITS alone or ITS + EF1-α) for the species in each genus. |
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The Botryosphaeriaceae: genera and species known from cultureBotryosphaerialesCanker pathogensDiplodiaFusicoccumLasiodiplodiaMulti-Locus sequence analysisSphaeropsisSystematicsIn this paper we give an account of the genera and species in the Botryosphaeriaceae. We consider morphological characters alone as inadequate to define genera or identify species, given the confusion it has repeatedly introduced in the past, their variation during development, and inevitable overlap as representation grows. Thus it seems likely that all of the older taxa linked to the Botryosphaeriaceae, and for which cultures or DNA sequence data are not available, cannot be linked to the species in this family that are known from culture. Such older taxa will have to be disregarded for future use unless they are epitypified. We therefore focus this paper on the 17 genera that can now be recognised phylogenetically, which concentrates on the species that are presently known from culture. Included is a historical overview of the family, the morphological features that define the genera and species and detailed descriptions of the 17 genera and 110 species. Keys to the genera and species are also provided. Phylogenetic relationships of the genera are given in a multi-locus tree based on combined SSU, ITS, LSU, EF1-α and β-tubulin sequences. The morphological descriptions are supplemented by phylogenetic trees (ITS alone or ITS + EF1-α) for the species in each genus.Elsevier2018-11-06T11:50:49Z2013-01-01T00:00:00Z2013info:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articleapplication/pdfhttp://hdl.handle.net/10773/24570eng0166-061610.3114/sim0021Phillips, A. J. L.Alves, A.Abdollahzadeh, J.Slippers, B.Wingfield, M. J.Groenewald, J. Z.Crous, P. W.info:eu-repo/semantics/openAccessreponame:Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)instname:Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãoinstacron:RCAAP2024-02-22T11:46:19Zoai:ria.ua.pt:10773/24570Portal AgregadorONGhttps://www.rcaap.pt/oai/openaireopendoar:71602024-03-20T02:57:29.514045Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) - Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãofalse |
dc.title.none.fl_str_mv |
The Botryosphaeriaceae: genera and species known from culture |
title |
The Botryosphaeriaceae: genera and species known from culture |
spellingShingle |
The Botryosphaeriaceae: genera and species known from culture Phillips, A. J. L. Botryosphaeriales Canker pathogens Diplodia Fusicoccum Lasiodiplodia Multi-Locus sequence analysis Sphaeropsis Systematics |
title_short |
The Botryosphaeriaceae: genera and species known from culture |
title_full |
The Botryosphaeriaceae: genera and species known from culture |
title_fullStr |
The Botryosphaeriaceae: genera and species known from culture |
title_full_unstemmed |
The Botryosphaeriaceae: genera and species known from culture |
title_sort |
The Botryosphaeriaceae: genera and species known from culture |
author |
Phillips, A. J. L. |
author_facet |
Phillips, A. J. L. Alves, A. Abdollahzadeh, J. Slippers, B. Wingfield, M. J. Groenewald, J. Z. Crous, P. W. |
author_role |
author |
author2 |
Alves, A. Abdollahzadeh, J. Slippers, B. Wingfield, M. J. Groenewald, J. Z. Crous, P. W. |
author2_role |
author author author author author author |
dc.contributor.author.fl_str_mv |
Phillips, A. J. L. Alves, A. Abdollahzadeh, J. Slippers, B. Wingfield, M. J. Groenewald, J. Z. Crous, P. W. |
dc.subject.por.fl_str_mv |
Botryosphaeriales Canker pathogens Diplodia Fusicoccum Lasiodiplodia Multi-Locus sequence analysis Sphaeropsis Systematics |
topic |
Botryosphaeriales Canker pathogens Diplodia Fusicoccum Lasiodiplodia Multi-Locus sequence analysis Sphaeropsis Systematics |
description |
In this paper we give an account of the genera and species in the Botryosphaeriaceae. We consider morphological characters alone as inadequate to define genera or identify species, given the confusion it has repeatedly introduced in the past, their variation during development, and inevitable overlap as representation grows. Thus it seems likely that all of the older taxa linked to the Botryosphaeriaceae, and for which cultures or DNA sequence data are not available, cannot be linked to the species in this family that are known from culture. Such older taxa will have to be disregarded for future use unless they are epitypified. We therefore focus this paper on the 17 genera that can now be recognised phylogenetically, which concentrates on the species that are presently known from culture. Included is a historical overview of the family, the morphological features that define the genera and species and detailed descriptions of the 17 genera and 110 species. Keys to the genera and species are also provided. Phylogenetic relationships of the genera are given in a multi-locus tree based on combined SSU, ITS, LSU, EF1-α and β-tubulin sequences. The morphological descriptions are supplemented by phylogenetic trees (ITS alone or ITS + EF1-α) for the species in each genus. |
publishDate |
2013 |
dc.date.none.fl_str_mv |
2013-01-01T00:00:00Z 2013 2018-11-06T11:50:49Z |
dc.type.status.fl_str_mv |
info:eu-repo/semantics/publishedVersion |
dc.type.driver.fl_str_mv |
info:eu-repo/semantics/article |
format |
article |
status_str |
publishedVersion |
dc.identifier.uri.fl_str_mv |
http://hdl.handle.net/10773/24570 |
url |
http://hdl.handle.net/10773/24570 |
dc.language.iso.fl_str_mv |
eng |
language |
eng |
dc.relation.none.fl_str_mv |
0166-0616 10.3114/sim0021 |
dc.rights.driver.fl_str_mv |
info:eu-repo/semantics/openAccess |
eu_rights_str_mv |
openAccess |
dc.format.none.fl_str_mv |
application/pdf |
dc.publisher.none.fl_str_mv |
Elsevier |
publisher.none.fl_str_mv |
Elsevier |
dc.source.none.fl_str_mv |
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Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informação |
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RCAAP |
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RCAAP |
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Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) |
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Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) |
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Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) - Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informação |
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1799137629410689024 |