A Transcriptome Atlas of Physcomitrella patens Provides Insights into the Evolution and Development of Land Plants

Detalhes bibliográficos
Autor(a) principal: Ortiz-Ramírez, Carlos
Data de Publicação: 2016
Outros Autores: Hernandez-Coronado, Marcela, Thamm, Anna, Catarino, Bruno, Wang, Mingyi, Dolan, Liam, Feijó, José A., Becker, Jörg D.
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
Texto Completo: http://hdl.handle.net/10400.7/713
Resumo: Post-print version of the article.
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spelling A Transcriptome Atlas of Physcomitrella patens Provides Insights into the Evolution and Development of Land PlantsBryopsidaEvolution, MolecularGene Expression Regulation, PlantPlant ProteinsTranscriptomePost-print version of the article.Identifying the genetic mechanisms that underpin the evolution of new organ and tissue systems is an aim of evolutionary developmental biology. Comparative functional genetic studies between angiosperms and bryophytes can define those genetic changes that were responsible for developmental innovations. Here, we report the generation of a transcriptome atlas covering most phases in the life cycle of the model bryophyte Physcomitrella patens, including detailed sporophyte developmental progression. We identified a comprehensive set of sporophyte-specific transcription factors, and found that many of these genes have homologs in angiosperms that function in developmental processes such as flowering and shoot branching. Deletion of the PpTCP5 transcription factor results in development of supernumerary sporangia attached to a single seta, suggesting that it negatively regulates branching in the moss sporophyte. Given that TCP genes repress branching in angiosperms, we suggest that this activity is ancient. Finally, comparison of P. patens and Arabidopsis thaliana transcriptomes led us to the identification of a conserved core of transcription factors expressed in tip-growing cells. We identified modifications in the expression patterns of these genes that could account for developmental differences between P. patens tip-growing cells and A. thaliana pollen tubes and root hairs.ERA-NET: (2nd call ERA-NET for Coordinating Plant Sciences); Fundação para a Ciência e a Tecnologia.ElsevierARCAOrtiz-Ramírez, CarlosHernandez-Coronado, MarcelaThamm, AnnaCatarino, BrunoWang, MingyiDolan, LiamFeijó, José A.Becker, Jörg D.2017-02-01T01:30:08Z2016-02-012016-02-01T00:00:00Zinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articleapplication/pdfapplication/vnd.openxmlformats-officedocument.spreadsheetml.sheetapplication/vnd.openxmlformats-officedocument.spreadsheetml.sheetapplication/vnd.openxmlformats-officedocument.spreadsheetml.sheetapplication/vnd.openxmlformats-officedocument.spreadsheetml.sheetapplication/vnd.openxmlformats-officedocument.spreadsheetml.sheetapplication/vnd.openxmlformats-officedocument.spreadsheetml.sheetapplication/pdfhttp://hdl.handle.net/10400.7/713engCarlos Ortiz-Ramírez, Marcela Hernandez-Coronado, Anna Thamm, Bruno Catarino, Mingyi Wang, Liam Dolan, José A. Feijó, Jörg D. Becker, A Transcriptome Atlas of Physcomitrella patens Provides Insights into the Evolution and Development of Land Plants, Molecular Plant, Volume 9, Issue 2, 1 February 2016, Pages 205-220, ISSN 1674-2052, http://dx.doi.org/10.1016/j.molp.2015.12.002. (http://www.sciencedirect.com/science/article/pii/S1674205215004554)10.1016/j.molp.2015.12.002info:eu-repo/semantics/embargoedAccessreponame:Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)instname:Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãoinstacron:RCAAP2022-11-29T14:35:06Zoai:arca.igc.gulbenkian.pt:10400.7/713Portal AgregadorONGhttps://www.rcaap.pt/oai/openaireopendoar:71602024-03-19T16:11:56.751343Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) - Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãofalse
dc.title.none.fl_str_mv A Transcriptome Atlas of Physcomitrella patens Provides Insights into the Evolution and Development of Land Plants
title A Transcriptome Atlas of Physcomitrella patens Provides Insights into the Evolution and Development of Land Plants
spellingShingle A Transcriptome Atlas of Physcomitrella patens Provides Insights into the Evolution and Development of Land Plants
Ortiz-Ramírez, Carlos
Bryopsida
Evolution, Molecular
Gene Expression Regulation, Plant
Plant Proteins
Transcriptome
title_short A Transcriptome Atlas of Physcomitrella patens Provides Insights into the Evolution and Development of Land Plants
title_full A Transcriptome Atlas of Physcomitrella patens Provides Insights into the Evolution and Development of Land Plants
title_fullStr A Transcriptome Atlas of Physcomitrella patens Provides Insights into the Evolution and Development of Land Plants
title_full_unstemmed A Transcriptome Atlas of Physcomitrella patens Provides Insights into the Evolution and Development of Land Plants
title_sort A Transcriptome Atlas of Physcomitrella patens Provides Insights into the Evolution and Development of Land Plants
author Ortiz-Ramírez, Carlos
author_facet Ortiz-Ramírez, Carlos
Hernandez-Coronado, Marcela
Thamm, Anna
Catarino, Bruno
Wang, Mingyi
Dolan, Liam
Feijó, José A.
Becker, Jörg D.
author_role author
author2 Hernandez-Coronado, Marcela
Thamm, Anna
Catarino, Bruno
Wang, Mingyi
Dolan, Liam
Feijó, José A.
Becker, Jörg D.
author2_role author
author
author
author
author
author
author
dc.contributor.none.fl_str_mv ARCA
dc.contributor.author.fl_str_mv Ortiz-Ramírez, Carlos
Hernandez-Coronado, Marcela
Thamm, Anna
Catarino, Bruno
Wang, Mingyi
Dolan, Liam
Feijó, José A.
Becker, Jörg D.
dc.subject.por.fl_str_mv Bryopsida
Evolution, Molecular
Gene Expression Regulation, Plant
Plant Proteins
Transcriptome
topic Bryopsida
Evolution, Molecular
Gene Expression Regulation, Plant
Plant Proteins
Transcriptome
description Post-print version of the article.
publishDate 2016
dc.date.none.fl_str_mv 2016-02-01
2016-02-01T00:00:00Z
2017-02-01T01:30:08Z
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv http://hdl.handle.net/10400.7/713
url http://hdl.handle.net/10400.7/713
dc.language.iso.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv Carlos Ortiz-Ramírez, Marcela Hernandez-Coronado, Anna Thamm, Bruno Catarino, Mingyi Wang, Liam Dolan, José A. Feijó, Jörg D. Becker, A Transcriptome Atlas of Physcomitrella patens Provides Insights into the Evolution and Development of Land Plants, Molecular Plant, Volume 9, Issue 2, 1 February 2016, Pages 205-220, ISSN 1674-2052, http://dx.doi.org/10.1016/j.molp.2015.12.002. (http://www.sciencedirect.com/science/article/pii/S1674205215004554)
10.1016/j.molp.2015.12.002
dc.rights.driver.fl_str_mv info:eu-repo/semantics/embargoedAccess
eu_rights_str_mv embargoedAccess
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application/vnd.openxmlformats-officedocument.spreadsheetml.sheet
application/vnd.openxmlformats-officedocument.spreadsheetml.sheet
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dc.publisher.none.fl_str_mv Elsevier
publisher.none.fl_str_mv Elsevier
dc.source.none.fl_str_mv reponame:Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
instname:Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informação
instacron:RCAAP
instname_str Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informação
instacron_str RCAAP
institution RCAAP
reponame_str Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
collection Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
repository.name.fl_str_mv Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) - Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informação
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