PulseNet International: vision for the implementation of whole genome sequencing (WGS) for global food-borne disease surveillance

Detalhes bibliográficos
Autor(a) principal: Nadon, Celine
Data de Publicação: 2017
Outros Autores: Van Walle, Ivo, Gerner-Smidt, Peter, Campos, Josefina, Chinen, Isabel, Concepcion-Acevedo, Jeniffer, Gilpin, Brent, Smith, Anthony M., Man Kam, Kai, Perez, Enrique, Trees, Eija, Kubota, Kristy, Takkinen, Johanna, Nielsen, Eva Møller, Carleton, Heather, FWD-NEXT Expert Panel
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
Texto Completo: http://hdl.handle.net/10400.18/5372
Resumo: FWD-NEXT Expert Panel - Portugal/INSA - Vítor Borges (Instituto Nacional de Saúde Doutor Ricardo Jorge, Lisbon, Portugal)
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spelling PulseNet International: vision for the implementation of whole genome sequencing (WGS) for global food-borne disease surveillanceFoodborne infectionsHumansLaboratory SurveillanceMultilocus Sequence TypingWhole Genome SequencingDatabases, FactualDisease OutbreaksFood MicrobiologyGenome, BacterialPublic Health PolicyMolecular MethodsFWD-NEXT Expert Panel - Portugal/INSA - Vítor Borges (Instituto Nacional de Saúde Doutor Ricardo Jorge, Lisbon, Portugal)PulseNet International is a global network dedicated to laboratory-based surveillance for food-borne diseases. The network comprises the national and regional laboratory networks of Africa, Asia Pacific, Canada, Europe, Latin America and the Caribbean, the Middle East, and the United States. The PulseNet International vision is the standardised use of whole genome sequencing (WGS) to identify and subtype food-borne bacterial pathogens worldwide, replacing traditional methods to strengthen preparedness and response, reduce global social and economic disease burden, and save lives. To meet the needs of real-time surveillance, the PulseNet International network will standardise subtyping via WGS using whole genome multilocus sequence typing (wgMLST), which delivers sufficiently high resolution and epidemiological concordance, plus unambiguous nomenclature for the purposes of surveillance. Standardised protocols, validation studies, quality control programmes, database and nomenclature development, and training should support the implementation and decentralisation of WGS. Ideally, WGS data collected for surveillance purposes should be publicly available, in real time where possible, respecting data protection policies. WGS data are suitable for surveillance and outbreak purposes and for answering scientific questions pertaining to source attribution, antimicrobial resistance, transmission patterns, and virulence, which will further enable the protection and improvement of public health with respect to food-borne disease.European Centre for Disease Prevention and ControlRepositório Científico do Instituto Nacional de SaúdeNadon, CelineVan Walle, IvoGerner-Smidt, PeterCampos, JosefinaChinen, IsabelConcepcion-Acevedo, JenifferGilpin, BrentSmith, Anthony M.Man Kam, KaiPerez, EnriqueTrees, EijaKubota, KristyTakkinen, JohannaNielsen, Eva MøllerCarleton, HeatherFWD-NEXT Expert Panel2018-03-08T13:10:48Z2017-07-082017-07-08T00:00:00Zinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articleapplication/pdfhttp://hdl.handle.net/10400.18/5372engEuro Surveill. 2017 Jun 8;22(23). pii: 30544. doi: 10.2807/1560-7917.ES.2017.22.23.30544.1560-791710.2807/1560-7917.ES.2017.22.23.30544info:eu-repo/semantics/openAccessreponame:Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)instname:Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãoinstacron:RCAAP2023-07-20T15:40:50Zoai:repositorio.insa.pt:10400.18/5372Portal AgregadorONGhttps://www.rcaap.pt/oai/openaireopendoar:71602024-03-19T18:40:06.082679Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) - Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãofalse
dc.title.none.fl_str_mv PulseNet International: vision for the implementation of whole genome sequencing (WGS) for global food-borne disease surveillance
title PulseNet International: vision for the implementation of whole genome sequencing (WGS) for global food-borne disease surveillance
spellingShingle PulseNet International: vision for the implementation of whole genome sequencing (WGS) for global food-borne disease surveillance
Nadon, Celine
Foodborne infections
Humans
Laboratory Surveillance
Multilocus Sequence Typing
Whole Genome Sequencing
Databases, Factual
Disease Outbreaks
Food Microbiology
Genome, Bacterial
Public Health Policy
Molecular Methods
title_short PulseNet International: vision for the implementation of whole genome sequencing (WGS) for global food-borne disease surveillance
title_full PulseNet International: vision for the implementation of whole genome sequencing (WGS) for global food-borne disease surveillance
title_fullStr PulseNet International: vision for the implementation of whole genome sequencing (WGS) for global food-borne disease surveillance
title_full_unstemmed PulseNet International: vision for the implementation of whole genome sequencing (WGS) for global food-borne disease surveillance
title_sort PulseNet International: vision for the implementation of whole genome sequencing (WGS) for global food-borne disease surveillance
author Nadon, Celine
author_facet Nadon, Celine
Van Walle, Ivo
Gerner-Smidt, Peter
Campos, Josefina
Chinen, Isabel
Concepcion-Acevedo, Jeniffer
Gilpin, Brent
Smith, Anthony M.
Man Kam, Kai
Perez, Enrique
Trees, Eija
Kubota, Kristy
Takkinen, Johanna
Nielsen, Eva Møller
Carleton, Heather
FWD-NEXT Expert Panel
author_role author
author2 Van Walle, Ivo
Gerner-Smidt, Peter
Campos, Josefina
Chinen, Isabel
Concepcion-Acevedo, Jeniffer
Gilpin, Brent
Smith, Anthony M.
Man Kam, Kai
Perez, Enrique
Trees, Eija
Kubota, Kristy
Takkinen, Johanna
Nielsen, Eva Møller
Carleton, Heather
FWD-NEXT Expert Panel
author2_role author
author
author
author
author
author
author
author
author
author
author
author
author
author
author
dc.contributor.none.fl_str_mv Repositório Científico do Instituto Nacional de Saúde
dc.contributor.author.fl_str_mv Nadon, Celine
Van Walle, Ivo
Gerner-Smidt, Peter
Campos, Josefina
Chinen, Isabel
Concepcion-Acevedo, Jeniffer
Gilpin, Brent
Smith, Anthony M.
Man Kam, Kai
Perez, Enrique
Trees, Eija
Kubota, Kristy
Takkinen, Johanna
Nielsen, Eva Møller
Carleton, Heather
FWD-NEXT Expert Panel
dc.subject.por.fl_str_mv Foodborne infections
Humans
Laboratory Surveillance
Multilocus Sequence Typing
Whole Genome Sequencing
Databases, Factual
Disease Outbreaks
Food Microbiology
Genome, Bacterial
Public Health Policy
Molecular Methods
topic Foodborne infections
Humans
Laboratory Surveillance
Multilocus Sequence Typing
Whole Genome Sequencing
Databases, Factual
Disease Outbreaks
Food Microbiology
Genome, Bacterial
Public Health Policy
Molecular Methods
description FWD-NEXT Expert Panel - Portugal/INSA - Vítor Borges (Instituto Nacional de Saúde Doutor Ricardo Jorge, Lisbon, Portugal)
publishDate 2017
dc.date.none.fl_str_mv 2017-07-08
2017-07-08T00:00:00Z
2018-03-08T13:10:48Z
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv http://hdl.handle.net/10400.18/5372
url http://hdl.handle.net/10400.18/5372
dc.language.iso.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv Euro Surveill. 2017 Jun 8;22(23). pii: 30544. doi: 10.2807/1560-7917.ES.2017.22.23.30544.
1560-7917
10.2807/1560-7917.ES.2017.22.23.30544
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
eu_rights_str_mv openAccess
dc.format.none.fl_str_mv application/pdf
dc.publisher.none.fl_str_mv European Centre for Disease Prevention and Control
publisher.none.fl_str_mv European Centre for Disease Prevention and Control
dc.source.none.fl_str_mv reponame:Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
instname:Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informação
instacron:RCAAP
instname_str Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informação
instacron_str RCAAP
institution RCAAP
reponame_str Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
collection Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
repository.name.fl_str_mv Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) - Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informação
repository.mail.fl_str_mv
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