Real-time 3D interactive segmentation of echocardiographic data through user-based deformation of B-spline explicit active surfaces

Detalhes bibliográficos
Autor(a) principal: Barbosa, Daniel
Data de Publicação: 2013
Outros Autores: Heyde, Brecht, Cikes, Maja, Dietenbeck, Thomas, Claus, Piet, Friboulet, Denis, Bernard, Olivier, D'hooge, Jan
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
Texto Completo: http://hdl.handle.net/11110/613
Resumo: Image segmentation is an ubiquitous task in medical image analysis, which is required to estimate morphological or functional properties of given anatomical targets. While automatic processing is highly desirable, image segmentation remains to date a supervised process in daily clinical practice. Indeed, challenging data often requires user interaction to capture the required level of anatomical detail. To optimize the analysis of 3D images, the user should be able to efficiently interact with the result of any segmentation algorithm to correct any possible disagreement. Building on a previously developed real-time 3D segmentation algorithm, we propose in the present work an extension towards an interactive application where user information can be used online to steer the segmentation result. This enables a synergistic collaboration between the operator and the underlying segmentation algorithm, thus contributing to higher segmentation accuracy, while keeping total analysis time competitive. To this end, we formalize the user interaction paradigm using a geometrical approach, where the user input is mapped to a non-cartesian space while this information is used to drive the boundary towards the position provided by the user. Additionally, we propose a shape regularization term which improves the interaction with the segmented surface, thereby making the interactive segmentation process less cumbersome. The resulting algorithm offers competitive performance both in terms of segmentation accuracy, as well as in terms of total analysis time. This contributes to a more efficient use of the existing segmentation tools in daily clinical practice. Furthermore, it compares favorably to state-of-the-art interactive segmentation software based on a 3D livewire-based algorithm.
id RCAP_4b20e7ecc177312200e3fa63cc346689
oai_identifier_str oai:ciencipca.ipca.pt:11110/613
network_acronym_str RCAP
network_name_str Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
repository_id_str 7160
spelling Real-time 3D interactive segmentation of echocardiographic data through user-based deformation of B-spline explicit active surfacesActive contoursB-spline explicit active surfacesUser interactionInteractive segmentationImage segmentation is an ubiquitous task in medical image analysis, which is required to estimate morphological or functional properties of given anatomical targets. While automatic processing is highly desirable, image segmentation remains to date a supervised process in daily clinical practice. Indeed, challenging data often requires user interaction to capture the required level of anatomical detail. To optimize the analysis of 3D images, the user should be able to efficiently interact with the result of any segmentation algorithm to correct any possible disagreement. Building on a previously developed real-time 3D segmentation algorithm, we propose in the present work an extension towards an interactive application where user information can be used online to steer the segmentation result. This enables a synergistic collaboration between the operator and the underlying segmentation algorithm, thus contributing to higher segmentation accuracy, while keeping total analysis time competitive. To this end, we formalize the user interaction paradigm using a geometrical approach, where the user input is mapped to a non-cartesian space while this information is used to drive the boundary towards the position provided by the user. Additionally, we propose a shape regularization term which improves the interaction with the segmented surface, thereby making the interactive segmentation process less cumbersome. The resulting algorithm offers competitive performance both in terms of segmentation accuracy, as well as in terms of total analysis time. This contributes to a more efficient use of the existing segmentation tools in daily clinical practice. Furthermore, it compares favorably to state-of-the-art interactive segmentation software based on a 3D livewire-based algorithm.FCT (SFRH/BD/62230/2009)Computerized Medical Imaging and Graphics2014-02-11T12:54:37Z2014-02-11T12:54:37Z2013-12-26T00:00:00Zinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articlehttp://hdl.handle.net/11110/613oai:ciencipca.ipca.pt:11110/613engCOMPUT MED IMAG GRAPhttp://hdl.handle.net/11110/613Barbosa, DanielHeyde, BrechtCikes, MajaDietenbeck, ThomasClaus, PietFriboulet, DenisBernard, OlivierD'hooge, Janinfo:eu-repo/semantics/openAccessreponame:Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)instname:Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãoinstacron:RCAAP2022-09-05T12:52:11Zoai:ciencipca.ipca.pt:11110/613Portal AgregadorONGhttps://www.rcaap.pt/oai/openaireopendoar:71602024-03-19T15:01:04.595701Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) - Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãofalse
dc.title.none.fl_str_mv Real-time 3D interactive segmentation of echocardiographic data through user-based deformation of B-spline explicit active surfaces
title Real-time 3D interactive segmentation of echocardiographic data through user-based deformation of B-spline explicit active surfaces
spellingShingle Real-time 3D interactive segmentation of echocardiographic data through user-based deformation of B-spline explicit active surfaces
Barbosa, Daniel
Active contours
B-spline explicit active surfaces
User interaction
Interactive segmentation
title_short Real-time 3D interactive segmentation of echocardiographic data through user-based deformation of B-spline explicit active surfaces
title_full Real-time 3D interactive segmentation of echocardiographic data through user-based deformation of B-spline explicit active surfaces
title_fullStr Real-time 3D interactive segmentation of echocardiographic data through user-based deformation of B-spline explicit active surfaces
title_full_unstemmed Real-time 3D interactive segmentation of echocardiographic data through user-based deformation of B-spline explicit active surfaces
title_sort Real-time 3D interactive segmentation of echocardiographic data through user-based deformation of B-spline explicit active surfaces
author Barbosa, Daniel
author_facet Barbosa, Daniel
Heyde, Brecht
Cikes, Maja
Dietenbeck, Thomas
Claus, Piet
Friboulet, Denis
Bernard, Olivier
D'hooge, Jan
author_role author
author2 Heyde, Brecht
Cikes, Maja
Dietenbeck, Thomas
Claus, Piet
Friboulet, Denis
Bernard, Olivier
D'hooge, Jan
author2_role author
author
author
author
author
author
author
dc.contributor.author.fl_str_mv Barbosa, Daniel
Heyde, Brecht
Cikes, Maja
Dietenbeck, Thomas
Claus, Piet
Friboulet, Denis
Bernard, Olivier
D'hooge, Jan
dc.subject.por.fl_str_mv Active contours
B-spline explicit active surfaces
User interaction
Interactive segmentation
topic Active contours
B-spline explicit active surfaces
User interaction
Interactive segmentation
description Image segmentation is an ubiquitous task in medical image analysis, which is required to estimate morphological or functional properties of given anatomical targets. While automatic processing is highly desirable, image segmentation remains to date a supervised process in daily clinical practice. Indeed, challenging data often requires user interaction to capture the required level of anatomical detail. To optimize the analysis of 3D images, the user should be able to efficiently interact with the result of any segmentation algorithm to correct any possible disagreement. Building on a previously developed real-time 3D segmentation algorithm, we propose in the present work an extension towards an interactive application where user information can be used online to steer the segmentation result. This enables a synergistic collaboration between the operator and the underlying segmentation algorithm, thus contributing to higher segmentation accuracy, while keeping total analysis time competitive. To this end, we formalize the user interaction paradigm using a geometrical approach, where the user input is mapped to a non-cartesian space while this information is used to drive the boundary towards the position provided by the user. Additionally, we propose a shape regularization term which improves the interaction with the segmented surface, thereby making the interactive segmentation process less cumbersome. The resulting algorithm offers competitive performance both in terms of segmentation accuracy, as well as in terms of total analysis time. This contributes to a more efficient use of the existing segmentation tools in daily clinical practice. Furthermore, it compares favorably to state-of-the-art interactive segmentation software based on a 3D livewire-based algorithm.
publishDate 2013
dc.date.none.fl_str_mv 2013-12-26T00:00:00Z
2014-02-11T12:54:37Z
2014-02-11T12:54:37Z
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv http://hdl.handle.net/11110/613
oai:ciencipca.ipca.pt:11110/613
url http://hdl.handle.net/11110/613
identifier_str_mv oai:ciencipca.ipca.pt:11110/613
dc.language.iso.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv COMPUT MED IMAG GRAP
http://hdl.handle.net/11110/613
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
eu_rights_str_mv openAccess
dc.publisher.none.fl_str_mv Computerized Medical Imaging and Graphics
publisher.none.fl_str_mv Computerized Medical Imaging and Graphics
dc.source.none.fl_str_mv reponame:Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
instname:Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informação
instacron:RCAAP
instname_str Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informação
instacron_str RCAAP
institution RCAAP
reponame_str Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
collection Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
repository.name.fl_str_mv Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) - Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informação
repository.mail.fl_str_mv
_version_ 1799129880807342080