Complete genome sequence of the Radiation-Resistant bacterium Rubrobacter radiotolerans RSPS-4

Detalhes bibliográficos
Autor(a) principal: Egas, C.
Data de Publicação: 2014
Outros Autores: Barroso, C. M., Froufe, H. J. C., Pacheco, J., Albuquerque, L., Costa, M. S. da
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
Texto Completo: http://hdl.handle.net/10316/109374
https://doi.org/10.4056/sigs.5661021
Resumo: Rubrobacter radiotolerans strain RSPS-4 is a slightly thermophilic member of the phylum "Actinobacteria" isolated from a hot spring in São Pedro do Sul, Portugal. This aerobic and halotolerant bacterium is also extremely resistant to gamma and UV radiation, which are the main reasons for the interest in sequencing its genome. Here, we present the complete genome sequence of strain RSPS-4 as well as its assembly and annotation. We also compare the gene sequence of this organism with that of the type strain of the species R. radiotolerans isolated from a hot spring in Japan. The genome of strain RSPS-4 comprises one circular chromosome of 2,875,491 bp with a G+C content of 66.91%, and 3 circular plasmids of 190,889 bp, 149,806 bp and 51,047 bp, harboring 3,214 predicted protein coding genes, 46 tRNA genes and a single rRNA operon.
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spelling Complete genome sequence of the Radiation-Resistant bacterium Rubrobacter radiotolerans RSPS-4Rubrobacter radiotoleransradiation-resistancegram positivegenome se-quence454 sequencingRubrobacter radiotolerans strain RSPS-4 is a slightly thermophilic member of the phylum "Actinobacteria" isolated from a hot spring in São Pedro do Sul, Portugal. This aerobic and halotolerant bacterium is also extremely resistant to gamma and UV radiation, which are the main reasons for the interest in sequencing its genome. Here, we present the complete genome sequence of strain RSPS-4 as well as its assembly and annotation. We also compare the gene sequence of this organism with that of the type strain of the species R. radiotolerans isolated from a hot spring in Japan. The genome of strain RSPS-4 comprises one circular chromosome of 2,875,491 bp with a G+C content of 66.91%, and 3 circular plasmids of 190,889 bp, 149,806 bp and 51,047 bp, harboring 3,214 predicted protein coding genes, 46 tRNA genes and a single rRNA operon.Springer Nature2014-06-15info:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articlehttp://hdl.handle.net/10316/109374http://hdl.handle.net/10316/109374https://doi.org/10.4056/sigs.5661021eng1944-3277Egas, C.Barroso, C. M.Froufe, H. J. C.Pacheco, J.Albuquerque, L.Costa, M. S. dainfo:eu-repo/semantics/openAccessreponame:Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)instname:Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãoinstacron:RCAAP2023-10-11T11:00:02Zoai:estudogeral.uc.pt:10316/109374Portal AgregadorONGhttps://www.rcaap.pt/oai/openaireopendoar:71602024-03-19T21:25:32.229523Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) - Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãofalse
dc.title.none.fl_str_mv Complete genome sequence of the Radiation-Resistant bacterium Rubrobacter radiotolerans RSPS-4
title Complete genome sequence of the Radiation-Resistant bacterium Rubrobacter radiotolerans RSPS-4
spellingShingle Complete genome sequence of the Radiation-Resistant bacterium Rubrobacter radiotolerans RSPS-4
Egas, C.
Rubrobacter radiotolerans
radiation-resistance
gram positive
genome se-quence
454 sequencing
title_short Complete genome sequence of the Radiation-Resistant bacterium Rubrobacter radiotolerans RSPS-4
title_full Complete genome sequence of the Radiation-Resistant bacterium Rubrobacter radiotolerans RSPS-4
title_fullStr Complete genome sequence of the Radiation-Resistant bacterium Rubrobacter radiotolerans RSPS-4
title_full_unstemmed Complete genome sequence of the Radiation-Resistant bacterium Rubrobacter radiotolerans RSPS-4
title_sort Complete genome sequence of the Radiation-Resistant bacterium Rubrobacter radiotolerans RSPS-4
author Egas, C.
author_facet Egas, C.
Barroso, C. M.
Froufe, H. J. C.
Pacheco, J.
Albuquerque, L.
Costa, M. S. da
author_role author
author2 Barroso, C. M.
Froufe, H. J. C.
Pacheco, J.
Albuquerque, L.
Costa, M. S. da
author2_role author
author
author
author
author
dc.contributor.author.fl_str_mv Egas, C.
Barroso, C. M.
Froufe, H. J. C.
Pacheco, J.
Albuquerque, L.
Costa, M. S. da
dc.subject.por.fl_str_mv Rubrobacter radiotolerans
radiation-resistance
gram positive
genome se-quence
454 sequencing
topic Rubrobacter radiotolerans
radiation-resistance
gram positive
genome se-quence
454 sequencing
description Rubrobacter radiotolerans strain RSPS-4 is a slightly thermophilic member of the phylum "Actinobacteria" isolated from a hot spring in São Pedro do Sul, Portugal. This aerobic and halotolerant bacterium is also extremely resistant to gamma and UV radiation, which are the main reasons for the interest in sequencing its genome. Here, we present the complete genome sequence of strain RSPS-4 as well as its assembly and annotation. We also compare the gene sequence of this organism with that of the type strain of the species R. radiotolerans isolated from a hot spring in Japan. The genome of strain RSPS-4 comprises one circular chromosome of 2,875,491 bp with a G+C content of 66.91%, and 3 circular plasmids of 190,889 bp, 149,806 bp and 51,047 bp, harboring 3,214 predicted protein coding genes, 46 tRNA genes and a single rRNA operon.
publishDate 2014
dc.date.none.fl_str_mv 2014-06-15
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv http://hdl.handle.net/10316/109374
http://hdl.handle.net/10316/109374
https://doi.org/10.4056/sigs.5661021
url http://hdl.handle.net/10316/109374
https://doi.org/10.4056/sigs.5661021
dc.language.iso.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv 1944-3277
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
eu_rights_str_mv openAccess
dc.publisher.none.fl_str_mv Springer Nature
publisher.none.fl_str_mv Springer Nature
dc.source.none.fl_str_mv reponame:Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
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collection Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
repository.name.fl_str_mv Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) - Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informação
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