Complete genome sequence of the Radiation-Resistant bacterium Rubrobacter radiotolerans RSPS-4
Autor(a) principal: | |
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Data de Publicação: | 2014 |
Outros Autores: | , , , , |
Tipo de documento: | Artigo |
Idioma: | eng |
Título da fonte: | Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) |
Texto Completo: | http://hdl.handle.net/10316/109374 https://doi.org/10.4056/sigs.5661021 |
Resumo: | Rubrobacter radiotolerans strain RSPS-4 is a slightly thermophilic member of the phylum "Actinobacteria" isolated from a hot spring in São Pedro do Sul, Portugal. This aerobic and halotolerant bacterium is also extremely resistant to gamma and UV radiation, which are the main reasons for the interest in sequencing its genome. Here, we present the complete genome sequence of strain RSPS-4 as well as its assembly and annotation. We also compare the gene sequence of this organism with that of the type strain of the species R. radiotolerans isolated from a hot spring in Japan. The genome of strain RSPS-4 comprises one circular chromosome of 2,875,491 bp with a G+C content of 66.91%, and 3 circular plasmids of 190,889 bp, 149,806 bp and 51,047 bp, harboring 3,214 predicted protein coding genes, 46 tRNA genes and a single rRNA operon. |
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Complete genome sequence of the Radiation-Resistant bacterium Rubrobacter radiotolerans RSPS-4Rubrobacter radiotoleransradiation-resistancegram positivegenome se-quence454 sequencingRubrobacter radiotolerans strain RSPS-4 is a slightly thermophilic member of the phylum "Actinobacteria" isolated from a hot spring in São Pedro do Sul, Portugal. This aerobic and halotolerant bacterium is also extremely resistant to gamma and UV radiation, which are the main reasons for the interest in sequencing its genome. Here, we present the complete genome sequence of strain RSPS-4 as well as its assembly and annotation. We also compare the gene sequence of this organism with that of the type strain of the species R. radiotolerans isolated from a hot spring in Japan. The genome of strain RSPS-4 comprises one circular chromosome of 2,875,491 bp with a G+C content of 66.91%, and 3 circular plasmids of 190,889 bp, 149,806 bp and 51,047 bp, harboring 3,214 predicted protein coding genes, 46 tRNA genes and a single rRNA operon.Springer Nature2014-06-15info:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articlehttp://hdl.handle.net/10316/109374http://hdl.handle.net/10316/109374https://doi.org/10.4056/sigs.5661021eng1944-3277Egas, C.Barroso, C. M.Froufe, H. J. C.Pacheco, J.Albuquerque, L.Costa, M. S. dainfo:eu-repo/semantics/openAccessreponame:Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)instname:Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãoinstacron:RCAAP2023-10-11T11:00:02Zoai:estudogeral.uc.pt:10316/109374Portal AgregadorONGhttps://www.rcaap.pt/oai/openaireopendoar:71602024-03-19T21:25:32.229523Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) - Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãofalse |
dc.title.none.fl_str_mv |
Complete genome sequence of the Radiation-Resistant bacterium Rubrobacter radiotolerans RSPS-4 |
title |
Complete genome sequence of the Radiation-Resistant bacterium Rubrobacter radiotolerans RSPS-4 |
spellingShingle |
Complete genome sequence of the Radiation-Resistant bacterium Rubrobacter radiotolerans RSPS-4 Egas, C. Rubrobacter radiotolerans radiation-resistance gram positive genome se-quence 454 sequencing |
title_short |
Complete genome sequence of the Radiation-Resistant bacterium Rubrobacter radiotolerans RSPS-4 |
title_full |
Complete genome sequence of the Radiation-Resistant bacterium Rubrobacter radiotolerans RSPS-4 |
title_fullStr |
Complete genome sequence of the Radiation-Resistant bacterium Rubrobacter radiotolerans RSPS-4 |
title_full_unstemmed |
Complete genome sequence of the Radiation-Resistant bacterium Rubrobacter radiotolerans RSPS-4 |
title_sort |
Complete genome sequence of the Radiation-Resistant bacterium Rubrobacter radiotolerans RSPS-4 |
author |
Egas, C. |
author_facet |
Egas, C. Barroso, C. M. Froufe, H. J. C. Pacheco, J. Albuquerque, L. Costa, M. S. da |
author_role |
author |
author2 |
Barroso, C. M. Froufe, H. J. C. Pacheco, J. Albuquerque, L. Costa, M. S. da |
author2_role |
author author author author author |
dc.contributor.author.fl_str_mv |
Egas, C. Barroso, C. M. Froufe, H. J. C. Pacheco, J. Albuquerque, L. Costa, M. S. da |
dc.subject.por.fl_str_mv |
Rubrobacter radiotolerans radiation-resistance gram positive genome se-quence 454 sequencing |
topic |
Rubrobacter radiotolerans radiation-resistance gram positive genome se-quence 454 sequencing |
description |
Rubrobacter radiotolerans strain RSPS-4 is a slightly thermophilic member of the phylum "Actinobacteria" isolated from a hot spring in São Pedro do Sul, Portugal. This aerobic and halotolerant bacterium is also extremely resistant to gamma and UV radiation, which are the main reasons for the interest in sequencing its genome. Here, we present the complete genome sequence of strain RSPS-4 as well as its assembly and annotation. We also compare the gene sequence of this organism with that of the type strain of the species R. radiotolerans isolated from a hot spring in Japan. The genome of strain RSPS-4 comprises one circular chromosome of 2,875,491 bp with a G+C content of 66.91%, and 3 circular plasmids of 190,889 bp, 149,806 bp and 51,047 bp, harboring 3,214 predicted protein coding genes, 46 tRNA genes and a single rRNA operon. |
publishDate |
2014 |
dc.date.none.fl_str_mv |
2014-06-15 |
dc.type.status.fl_str_mv |
info:eu-repo/semantics/publishedVersion |
dc.type.driver.fl_str_mv |
info:eu-repo/semantics/article |
format |
article |
status_str |
publishedVersion |
dc.identifier.uri.fl_str_mv |
http://hdl.handle.net/10316/109374 http://hdl.handle.net/10316/109374 https://doi.org/10.4056/sigs.5661021 |
url |
http://hdl.handle.net/10316/109374 https://doi.org/10.4056/sigs.5661021 |
dc.language.iso.fl_str_mv |
eng |
language |
eng |
dc.relation.none.fl_str_mv |
1944-3277 |
dc.rights.driver.fl_str_mv |
info:eu-repo/semantics/openAccess |
eu_rights_str_mv |
openAccess |
dc.publisher.none.fl_str_mv |
Springer Nature |
publisher.none.fl_str_mv |
Springer Nature |
dc.source.none.fl_str_mv |
reponame:Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) instname:Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informação instacron:RCAAP |
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Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informação |
instacron_str |
RCAAP |
institution |
RCAAP |
reponame_str |
Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) |
collection |
Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) |
repository.name.fl_str_mv |
Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) - Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informação |
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1799134138056310784 |