Characterization of protein and transcript levels in amisyn mutant mice

Detalhes bibliográficos
Autor(a) principal: Ferreira, Joana Sofia Lopes
Data de Publicação: 2020
Tipo de documento: Dissertação
Idioma: eng
Título da fonte: Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
Texto Completo: http://hdl.handle.net/10773/29009
Resumo: Amisyn is a 24 kDa protein vertebrate-specific SNARE protein known to interact with key exocytic proteins syntaxin1A, syntaxin4, SNAP25 and phospholipid PI(4,5)P2. Based on the recently published work in neuroendocrine cells and amisyn’s high expression in brain tissue, we hypothesize that this protein has a role in the negative regulation of synaptic vesicle exocytosis. Mutations in amisyn (gene name: STXBP6) have been reported in the context of several diseases like ASD (autism spectrum disorders), cancer and diabetes, which emphasized the importance of further studies. In this thesis, various experimental approaches were performed such as recombinant protein expression, liposome co-sedimentation assay, Western Blot, and quantitative PCR analyses, to advance the characterization of the amisyn protein and its possible functions. Liposome co-sedimentation assay revealed that amisyn requires phospholipid PI(4,5)P2 to bind to the membranes through its PH domain. Mutations in the amisyn’s PH domain abolished protein’s interactions with the membrane. Further, we observed that amisyn knock-out (KO) mice are viable, and we preformed systematic analysis of protein and transcript levels of various proteins related to the process of neurotransmission. This analysis revealed that the lack of amisyn leads to a decrease in VAMP2 and PSD95 protein levels and to an increase in Rab3A and α-synuclein protein levels. It was also found that the transcript levels of EndoA1, PSD95, RhoA and CAMKIV decreased and the transcript levels of Rab7 increased when amisyn was not present. Further studies are needed to fully comprehend the functions of this small SNARE protein.
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spelling Characterization of protein and transcript levels in amisyn mutant miceAmisynExocytosisSynaptic vesicleNegative regulationAmisyn is a 24 kDa protein vertebrate-specific SNARE protein known to interact with key exocytic proteins syntaxin1A, syntaxin4, SNAP25 and phospholipid PI(4,5)P2. Based on the recently published work in neuroendocrine cells and amisyn’s high expression in brain tissue, we hypothesize that this protein has a role in the negative regulation of synaptic vesicle exocytosis. Mutations in amisyn (gene name: STXBP6) have been reported in the context of several diseases like ASD (autism spectrum disorders), cancer and diabetes, which emphasized the importance of further studies. In this thesis, various experimental approaches were performed such as recombinant protein expression, liposome co-sedimentation assay, Western Blot, and quantitative PCR analyses, to advance the characterization of the amisyn protein and its possible functions. Liposome co-sedimentation assay revealed that amisyn requires phospholipid PI(4,5)P2 to bind to the membranes through its PH domain. Mutations in the amisyn’s PH domain abolished protein’s interactions with the membrane. Further, we observed that amisyn knock-out (KO) mice are viable, and we preformed systematic analysis of protein and transcript levels of various proteins related to the process of neurotransmission. This analysis revealed that the lack of amisyn leads to a decrease in VAMP2 and PSD95 protein levels and to an increase in Rab3A and α-synuclein protein levels. It was also found that the transcript levels of EndoA1, PSD95, RhoA and CAMKIV decreased and the transcript levels of Rab7 increased when amisyn was not present. Further studies are needed to fully comprehend the functions of this small SNARE protein.A amisina é uma proteína SNARE de 24 kDa especifica de vertebrados, cujas interações com proteínas exocíticas chave sintaxina1A, sintaxina4, SNAP25 e fosfolípido PI(4,5)P2 são conhecidas. Baseado em publicações recentes em células neuroendócrinas e na elevada expressão de amisina no tecido cerebral, formulámos a hipótese de que esta proteína tem um papel na regulação negativa da exocitose de vesiculas sinápticas. Mutações na amisina (nome do gene: STXBP6) foram reportadas no contexto de algumas doenças, como TEA (transtorno do espetro autista), cancro e diabetes, o que enfatiza a importância da realização de mais estudos. Nesta dissertação, várias abordagens experimentais foram realizadas, como expressão de proteína recombinante, ensaio de co-sedimentação de lipossomas, Western Blot e análise de PCR quantitativo, para avançar a caracterização da proteína amisina e das suas possíveis funções. O ensaio de co-sedimentação de lipossomas revelou que a amisina requere o fosfolípido PI(4,5)P2 para se ligar a membranas através do seu domínio PH. Mutações no domínio PH da amisina aboliram a interação desta proteína com a membrana. Para além disso, observámos que os murganhos knock-out (KO) de amisina são viáveis, e realizámos uma análise sistemática dos níveis de proteína e de transcrição de várias proteínas relacionadas com o processo de neurotransmissão. Esta análise revelou que a falta de amisina leva a um decréscimo dos níveis das proteínas VAMP2 e PSD95 e a um aumento dos níveis das proteínas Rab3A e α-sinucleína. Também foi descoberto que os níveis de transcrição relativos à EndoA1, PSD95, RhoA e CAMKIV diminuíram e que os níveis de transcrição de Rab7 aumentaram quando a amisina não estava presente. Estudos adicionais são necessários para compreender completamente as funções desta pequena proteína SNARE.2022-07-17T00:00:00Z2020-07-14T00:00:00Z2020-07-14info:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/masterThesisapplication/pdfhttp://hdl.handle.net/10773/29009engFerreira, Joana Sofia Lopesinfo:eu-repo/semantics/embargoedAccessreponame:Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)instname:Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãoinstacron:RCAAP2024-02-22T11:56:09Zoai:ria.ua.pt:10773/29009Portal AgregadorONGhttps://www.rcaap.pt/oai/openaireopendoar:71602024-03-20T03:01:27.930307Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) - Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãofalse
dc.title.none.fl_str_mv Characterization of protein and transcript levels in amisyn mutant mice
title Characterization of protein and transcript levels in amisyn mutant mice
spellingShingle Characterization of protein and transcript levels in amisyn mutant mice
Ferreira, Joana Sofia Lopes
Amisyn
Exocytosis
Synaptic vesicle
Negative regulation
title_short Characterization of protein and transcript levels in amisyn mutant mice
title_full Characterization of protein and transcript levels in amisyn mutant mice
title_fullStr Characterization of protein and transcript levels in amisyn mutant mice
title_full_unstemmed Characterization of protein and transcript levels in amisyn mutant mice
title_sort Characterization of protein and transcript levels in amisyn mutant mice
author Ferreira, Joana Sofia Lopes
author_facet Ferreira, Joana Sofia Lopes
author_role author
dc.contributor.author.fl_str_mv Ferreira, Joana Sofia Lopes
dc.subject.por.fl_str_mv Amisyn
Exocytosis
Synaptic vesicle
Negative regulation
topic Amisyn
Exocytosis
Synaptic vesicle
Negative regulation
description Amisyn is a 24 kDa protein vertebrate-specific SNARE protein known to interact with key exocytic proteins syntaxin1A, syntaxin4, SNAP25 and phospholipid PI(4,5)P2. Based on the recently published work in neuroendocrine cells and amisyn’s high expression in brain tissue, we hypothesize that this protein has a role in the negative regulation of synaptic vesicle exocytosis. Mutations in amisyn (gene name: STXBP6) have been reported in the context of several diseases like ASD (autism spectrum disorders), cancer and diabetes, which emphasized the importance of further studies. In this thesis, various experimental approaches were performed such as recombinant protein expression, liposome co-sedimentation assay, Western Blot, and quantitative PCR analyses, to advance the characterization of the amisyn protein and its possible functions. Liposome co-sedimentation assay revealed that amisyn requires phospholipid PI(4,5)P2 to bind to the membranes through its PH domain. Mutations in the amisyn’s PH domain abolished protein’s interactions with the membrane. Further, we observed that amisyn knock-out (KO) mice are viable, and we preformed systematic analysis of protein and transcript levels of various proteins related to the process of neurotransmission. This analysis revealed that the lack of amisyn leads to a decrease in VAMP2 and PSD95 protein levels and to an increase in Rab3A and α-synuclein protein levels. It was also found that the transcript levels of EndoA1, PSD95, RhoA and CAMKIV decreased and the transcript levels of Rab7 increased when amisyn was not present. Further studies are needed to fully comprehend the functions of this small SNARE protein.
publishDate 2020
dc.date.none.fl_str_mv 2020-07-14T00:00:00Z
2020-07-14
2022-07-17T00:00:00Z
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