Volatilomic insight of head and neck cancer via the effects observed on saliva metabolites

Detalhes bibliográficos
Autor(a) principal: Taware, Ravindra
Data de Publicação: 2018
Outros Autores: Taunk, Khushman, Pereira, Jorge A. M., Shirolkar, Amey, Soneji, Dharmesh, Câmara, José S., Nagarajaram, H. A., Rapole, Srikanth
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
Texto Completo: http://hdl.handle.net/10400.13/2521
Resumo: Head and neck cancer (HNC) is a heterogeneous malignant disease with distinct global distribution. Metabolic adaptations of HNC are significantly gaining clinical interests nowadays. Here, we investigated effects of HNC on differential expression of volatile metabolites in human saliva. We applied headspace solid phase microextraction coupled with gas chromatography-mass spectrometry analysis of saliva samples collected from 59 human subjects (HNC - 32, Control - 27). We identified and quantified 48 volatile organic metabolites (VOMs) and observed profound effects of HNC on these metabolites. These effects were VOM specific and significantly differed in the biologically comparable healthy controls. HNC induced changes in salivary VOM composition were well attributed to in vivo metabolic effects. A panel of 15 VOMs with variable importance in projection (VIP) score >1, false discovery rate (FDR) corrected p-value < 0.05 and log2 fold change (log2 FC) value of ≥0.58/≤-0.58 were regarded as discriminatory metabolites of pathophysiological importance. Afterwards, receiver operator characteristic curve (ROC) projected certain VOMs viz., 1,4-dichlorobenzene, 1,2-decanediol, 2,5-bis1,1-dimethylethylphenol and E-3-decen-2-ol with profound metabolic effects of HNC and highest class segregation potential. Moreover, metabolic pathways analysis portrayed several dysregulated pathways in HNC, which enhanced our basic understanding on salivary VOM changes. Our observations could redefine several known/already investigated systemic phenomenons (e.g. biochemical pathways). These findings will inspire further research in this direction and may open unconventional avenues for non-invasive monitoring of HNC and its therapy in the future.
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spelling Volatilomic insight of head and neck cancer via the effects observed on saliva metabolitesDiagnostic markersMass spectrometryMetabolomicsOral cancer detection.Faculdade de Ciências Exatas e da EngenhariaCentro de Química da MadeiraHead and neck cancer (HNC) is a heterogeneous malignant disease with distinct global distribution. Metabolic adaptations of HNC are significantly gaining clinical interests nowadays. Here, we investigated effects of HNC on differential expression of volatile metabolites in human saliva. We applied headspace solid phase microextraction coupled with gas chromatography-mass spectrometry analysis of saliva samples collected from 59 human subjects (HNC - 32, Control - 27). We identified and quantified 48 volatile organic metabolites (VOMs) and observed profound effects of HNC on these metabolites. These effects were VOM specific and significantly differed in the biologically comparable healthy controls. HNC induced changes in salivary VOM composition were well attributed to in vivo metabolic effects. A panel of 15 VOMs with variable importance in projection (VIP) score >1, false discovery rate (FDR) corrected p-value < 0.05 and log2 fold change (log2 FC) value of ≥0.58/≤-0.58 were regarded as discriminatory metabolites of pathophysiological importance. Afterwards, receiver operator characteristic curve (ROC) projected certain VOMs viz., 1,4-dichlorobenzene, 1,2-decanediol, 2,5-bis1,1-dimethylethylphenol and E-3-decen-2-ol with profound metabolic effects of HNC and highest class segregation potential. Moreover, metabolic pathways analysis portrayed several dysregulated pathways in HNC, which enhanced our basic understanding on salivary VOM changes. Our observations could redefine several known/already investigated systemic phenomenons (e.g. biochemical pathways). These findings will inspire further research in this direction and may open unconventional avenues for non-invasive monitoring of HNC and its therapy in the future.Nature ResearchDigitUMaTaware, RavindraTaunk, KhushmanPereira, Jorge A. M.Shirolkar, AmeySoneji, DharmeshCâmara, José S.Nagarajaram, H. A.Rapole, Srikanth2019-07-30T08:54:28Z20182018-01-01T00:00:00Zinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articleapplication/pdfhttp://hdl.handle.net/10400.13/2521engTaware, R., Taunk, K., Pereira, J. A., Shirolkar, A., Soneji, D., Câmara, J. S., ... & Rapole, S. (2018). Volatilomic insight of head and neck cancer via the effects observed on saliva metabolites. Scientific reports, 8(1), 17725.2045-232210.1038/s41598-018-35854-xinfo:eu-repo/semantics/openAccessreponame:Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)instname:Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãoinstacron:RCAAP2024-03-17T05:57:35Zoai:digituma.uma.pt:10400.13/2521Portal AgregadorONGhttps://www.rcaap.pt/oai/openaireopendoar:71602024-03-19T15:05:18.611794Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) - Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãofalse
dc.title.none.fl_str_mv Volatilomic insight of head and neck cancer via the effects observed on saliva metabolites
title Volatilomic insight of head and neck cancer via the effects observed on saliva metabolites
spellingShingle Volatilomic insight of head and neck cancer via the effects observed on saliva metabolites
Taware, Ravindra
Diagnostic markers
Mass spectrometry
Metabolomics
Oral cancer detection
.
Faculdade de Ciências Exatas e da Engenharia
Centro de Química da Madeira
title_short Volatilomic insight of head and neck cancer via the effects observed on saliva metabolites
title_full Volatilomic insight of head and neck cancer via the effects observed on saliva metabolites
title_fullStr Volatilomic insight of head and neck cancer via the effects observed on saliva metabolites
title_full_unstemmed Volatilomic insight of head and neck cancer via the effects observed on saliva metabolites
title_sort Volatilomic insight of head and neck cancer via the effects observed on saliva metabolites
author Taware, Ravindra
author_facet Taware, Ravindra
Taunk, Khushman
Pereira, Jorge A. M.
Shirolkar, Amey
Soneji, Dharmesh
Câmara, José S.
Nagarajaram, H. A.
Rapole, Srikanth
author_role author
author2 Taunk, Khushman
Pereira, Jorge A. M.
Shirolkar, Amey
Soneji, Dharmesh
Câmara, José S.
Nagarajaram, H. A.
Rapole, Srikanth
author2_role author
author
author
author
author
author
author
dc.contributor.none.fl_str_mv DigitUMa
dc.contributor.author.fl_str_mv Taware, Ravindra
Taunk, Khushman
Pereira, Jorge A. M.
Shirolkar, Amey
Soneji, Dharmesh
Câmara, José S.
Nagarajaram, H. A.
Rapole, Srikanth
dc.subject.por.fl_str_mv Diagnostic markers
Mass spectrometry
Metabolomics
Oral cancer detection
.
Faculdade de Ciências Exatas e da Engenharia
Centro de Química da Madeira
topic Diagnostic markers
Mass spectrometry
Metabolomics
Oral cancer detection
.
Faculdade de Ciências Exatas e da Engenharia
Centro de Química da Madeira
description Head and neck cancer (HNC) is a heterogeneous malignant disease with distinct global distribution. Metabolic adaptations of HNC are significantly gaining clinical interests nowadays. Here, we investigated effects of HNC on differential expression of volatile metabolites in human saliva. We applied headspace solid phase microextraction coupled with gas chromatography-mass spectrometry analysis of saliva samples collected from 59 human subjects (HNC - 32, Control - 27). We identified and quantified 48 volatile organic metabolites (VOMs) and observed profound effects of HNC on these metabolites. These effects were VOM specific and significantly differed in the biologically comparable healthy controls. HNC induced changes in salivary VOM composition were well attributed to in vivo metabolic effects. A panel of 15 VOMs with variable importance in projection (VIP) score >1, false discovery rate (FDR) corrected p-value < 0.05 and log2 fold change (log2 FC) value of ≥0.58/≤-0.58 were regarded as discriminatory metabolites of pathophysiological importance. Afterwards, receiver operator characteristic curve (ROC) projected certain VOMs viz., 1,4-dichlorobenzene, 1,2-decanediol, 2,5-bis1,1-dimethylethylphenol and E-3-decen-2-ol with profound metabolic effects of HNC and highest class segregation potential. Moreover, metabolic pathways analysis portrayed several dysregulated pathways in HNC, which enhanced our basic understanding on salivary VOM changes. Our observations could redefine several known/already investigated systemic phenomenons (e.g. biochemical pathways). These findings will inspire further research in this direction and may open unconventional avenues for non-invasive monitoring of HNC and its therapy in the future.
publishDate 2018
dc.date.none.fl_str_mv 2018
2018-01-01T00:00:00Z
2019-07-30T08:54:28Z
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv http://hdl.handle.net/10400.13/2521
url http://hdl.handle.net/10400.13/2521
dc.language.iso.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv Taware, R., Taunk, K., Pereira, J. A., Shirolkar, A., Soneji, D., Câmara, J. S., ... & Rapole, S. (2018). Volatilomic insight of head and neck cancer via the effects observed on saliva metabolites. Scientific reports, 8(1), 17725.
2045-2322
10.1038/s41598-018-35854-x
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
eu_rights_str_mv openAccess
dc.format.none.fl_str_mv application/pdf
dc.publisher.none.fl_str_mv Nature Research
publisher.none.fl_str_mv Nature Research
dc.source.none.fl_str_mv reponame:Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
instname:Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informação
instacron:RCAAP
instname_str Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informação
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collection Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
repository.name.fl_str_mv Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) - Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informação
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