Prediction of bioactive compounds activity against wood contaminant fungi using artificial neural networks

Detalhes bibliográficos
Autor(a) principal: Vicente, Henrique
Data de Publicação: 2013
Outros Autores: Roseiro, José, Arteiro, José, Neves, José, Caldeira, A. Teresa
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
Texto Completo: http://hdl.handle.net/10174/9039
https://doi.org/10.1139/cjfr-2013-0142
Resumo: Biopesticides based on natural endophytic bacteria to control plant diseases are an ecological alternative to the chemical treatments. Bacillus species produce a wide variety of metabolites with biological activity like iturinic lipopeptides. This work addresses the production of biopesticides based on natural endophytic bacteria, isolated from Quercus suber. Artificial Neural Networks were used to maximize the percentage of inhibition triggered by antifungal activity of bioactive compounds produced by Bacillus amyloliquefaciens. The active compounds, produced in liquid cultures, inhibited the growth of fifteen fungi and exhibited a broader spectrum of antifungal activity against surface contaminant fungi, blue stain fungi and phytopathogenic fungi. A 19-7-6-1 neural network was selected to predict the percentage of inhibition produced by antifungal bioactive compounds. A good match among the observed and predicted values was obtained with the R2 values varying between 0.9965 – 0.9971 and 0.9974 – 0.9989 for training and test sets. The 19-7-6-1 neural network was used to establish the dilution rates that maximize the production of antifungal bioactive compounds, namely 0.25 h-1 for surface contaminant fungi, 0.45 h-1 for blue stain fungi and between 0.30 and 0.40 h-1 for phytopathogenic fungi. Artificial neural networks show great potential in the modelling and optimization of these bioprocesses.
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spelling Prediction of bioactive compounds activity against wood contaminant fungi using artificial neural networksAntifungal ActivityArtificial Neural NetworksBacillus amyloliquefaciensIntelligent Predictive ModelsPhyto-pathogenic FungiBiopesticides based on natural endophytic bacteria to control plant diseases are an ecological alternative to the chemical treatments. Bacillus species produce a wide variety of metabolites with biological activity like iturinic lipopeptides. This work addresses the production of biopesticides based on natural endophytic bacteria, isolated from Quercus suber. Artificial Neural Networks were used to maximize the percentage of inhibition triggered by antifungal activity of bioactive compounds produced by Bacillus amyloliquefaciens. The active compounds, produced in liquid cultures, inhibited the growth of fifteen fungi and exhibited a broader spectrum of antifungal activity against surface contaminant fungi, blue stain fungi and phytopathogenic fungi. A 19-7-6-1 neural network was selected to predict the percentage of inhibition produced by antifungal bioactive compounds. A good match among the observed and predicted values was obtained with the R2 values varying between 0.9965 – 0.9971 and 0.9974 – 0.9989 for training and test sets. The 19-7-6-1 neural network was used to establish the dilution rates that maximize the production of antifungal bioactive compounds, namely 0.25 h-1 for surface contaminant fungi, 0.45 h-1 for blue stain fungi and between 0.30 and 0.40 h-1 for phytopathogenic fungi. Artificial neural networks show great potential in the modelling and optimization of these bioprocesses.National Research Council of Canada2013-12-04T12:04:39Z2013-12-042013-01-01T00:00:00Zinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articlehttp://hdl.handle.net/10174/9039http://hdl.handle.net/10174/9039https://doi.org/10.1139/cjfr-2013-0142engVicente, H., Roseiro, J.C., Arteiro, J.M., Neves, J. & Caldeira, A.T., Prediction of bioactive compounds activity against wood contaminant fungi using artificial neural networks. Canadian Journal of Forest Research, 43:985-992, 2013985-9921208-6037 (electronic)0045-5067 (print)http://www.nrcresearchpress.com/doi/abs/10.1139/cjfr-2013-0142#.Ui-T9H_YH0J43Canadian Journal of Forest Research11Departamento de Químicahvicente@uevora.ptjose.roseiro@lneg.ptjmsa@uevora.ptjneves@di.uminho.ptatc@uevora.pt276Vicente, HenriqueRoseiro, JoséArteiro, JoséNeves, JoséCaldeira, A. Teresainfo:eu-repo/semantics/openAccessreponame:Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)instname:Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãoinstacron:RCAAP2024-01-03T18:50:08Zoai:dspace.uevora.pt:10174/9039Portal AgregadorONGhttps://www.rcaap.pt/oai/openaireopendoar:71602024-03-20T01:02:59.181134Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) - Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãofalse
dc.title.none.fl_str_mv Prediction of bioactive compounds activity against wood contaminant fungi using artificial neural networks
title Prediction of bioactive compounds activity against wood contaminant fungi using artificial neural networks
spellingShingle Prediction of bioactive compounds activity against wood contaminant fungi using artificial neural networks
Vicente, Henrique
Antifungal Activity
Artificial Neural Networks
Bacillus amyloliquefaciens
Intelligent Predictive Models
Phyto-pathogenic Fungi
title_short Prediction of bioactive compounds activity against wood contaminant fungi using artificial neural networks
title_full Prediction of bioactive compounds activity against wood contaminant fungi using artificial neural networks
title_fullStr Prediction of bioactive compounds activity against wood contaminant fungi using artificial neural networks
title_full_unstemmed Prediction of bioactive compounds activity against wood contaminant fungi using artificial neural networks
title_sort Prediction of bioactive compounds activity against wood contaminant fungi using artificial neural networks
author Vicente, Henrique
author_facet Vicente, Henrique
Roseiro, José
Arteiro, José
Neves, José
Caldeira, A. Teresa
author_role author
author2 Roseiro, José
Arteiro, José
Neves, José
Caldeira, A. Teresa
author2_role author
author
author
author
dc.contributor.author.fl_str_mv Vicente, Henrique
Roseiro, José
Arteiro, José
Neves, José
Caldeira, A. Teresa
dc.subject.por.fl_str_mv Antifungal Activity
Artificial Neural Networks
Bacillus amyloliquefaciens
Intelligent Predictive Models
Phyto-pathogenic Fungi
topic Antifungal Activity
Artificial Neural Networks
Bacillus amyloliquefaciens
Intelligent Predictive Models
Phyto-pathogenic Fungi
description Biopesticides based on natural endophytic bacteria to control plant diseases are an ecological alternative to the chemical treatments. Bacillus species produce a wide variety of metabolites with biological activity like iturinic lipopeptides. This work addresses the production of biopesticides based on natural endophytic bacteria, isolated from Quercus suber. Artificial Neural Networks were used to maximize the percentage of inhibition triggered by antifungal activity of bioactive compounds produced by Bacillus amyloliquefaciens. The active compounds, produced in liquid cultures, inhibited the growth of fifteen fungi and exhibited a broader spectrum of antifungal activity against surface contaminant fungi, blue stain fungi and phytopathogenic fungi. A 19-7-6-1 neural network was selected to predict the percentage of inhibition produced by antifungal bioactive compounds. A good match among the observed and predicted values was obtained with the R2 values varying between 0.9965 – 0.9971 and 0.9974 – 0.9989 for training and test sets. The 19-7-6-1 neural network was used to establish the dilution rates that maximize the production of antifungal bioactive compounds, namely 0.25 h-1 for surface contaminant fungi, 0.45 h-1 for blue stain fungi and between 0.30 and 0.40 h-1 for phytopathogenic fungi. Artificial neural networks show great potential in the modelling and optimization of these bioprocesses.
publishDate 2013
dc.date.none.fl_str_mv 2013-12-04T12:04:39Z
2013-12-04
2013-01-01T00:00:00Z
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv http://hdl.handle.net/10174/9039
http://hdl.handle.net/10174/9039
https://doi.org/10.1139/cjfr-2013-0142
url http://hdl.handle.net/10174/9039
https://doi.org/10.1139/cjfr-2013-0142
dc.language.iso.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv Vicente, H., Roseiro, J.C., Arteiro, J.M., Neves, J. & Caldeira, A.T., Prediction of bioactive compounds activity against wood contaminant fungi using artificial neural networks. Canadian Journal of Forest Research, 43:985-992, 2013
985-992
1208-6037 (electronic)
0045-5067 (print)
http://www.nrcresearchpress.com/doi/abs/10.1139/cjfr-2013-0142#.Ui-T9H_YH0J
43
Canadian Journal of Forest Research
11
Departamento de Química
hvicente@uevora.pt
jose.roseiro@lneg.pt
jmsa@uevora.pt
jneves@di.uminho.pt
atc@uevora.pt
276
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
eu_rights_str_mv openAccess
dc.publisher.none.fl_str_mv National Research Council of Canada
publisher.none.fl_str_mv National Research Council of Canada
dc.source.none.fl_str_mv reponame:Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
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instacron:RCAAP
instname_str Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informação
instacron_str RCAAP
institution RCAAP
reponame_str Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
collection Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
repository.name.fl_str_mv Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) - Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informação
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