An experimental test on the probability of extinction of new genetic variants

Detalhes bibliográficos
Autor(a) principal: Chelo, Ivo M.
Data de Publicação: 2013
Outros Autores: Nédli, Judit, Gordo, Isabel, Teotónio, Henrique
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
Texto Completo: http://hdl.handle.net/10400.7/440
Resumo: In 1927, J.B.S. Haldane reasoned that the probability of fixation of new beneficial alleles is twice their fitness effect. This result, later generalized by M. Kimura, has since become the cornerstone of modern population genetics. There is no experimental test of Haldane's insight that new beneficial alleles are lost with high probability. Here we demonstrate that extinction rates decrease with increasing initial numbers of beneficial alleles, as expected, by performing invasion experiments with inbred lines of the nematode Caenorhabditis elegans. We further show that the extinction rates of deleterious alleles are higher than those of beneficial alleles, also as expected. Interestingly, we also find that for these inbred lines, when at intermediate frequencies, the fate of invaders might not result in their ultimate fixation or loss but on their maintenance. Our study confirms the key results from classical population genetics and highlights that the nature of adaptation can be complex.
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spelling An experimental test on the probability of extinction of new genetic variantsExtinction, BiologicalGenetic VariationProbabilityIn 1927, J.B.S. Haldane reasoned that the probability of fixation of new beneficial alleles is twice their fitness effect. This result, later generalized by M. Kimura, has since become the cornerstone of modern population genetics. There is no experimental test of Haldane's insight that new beneficial alleles are lost with high probability. Here we demonstrate that extinction rates decrease with increasing initial numbers of beneficial alleles, as expected, by performing invasion experiments with inbred lines of the nematode Caenorhabditis elegans. We further show that the extinction rates of deleterious alleles are higher than those of beneficial alleles, also as expected. Interestingly, we also find that for these inbred lines, when at intermediate frequencies, the fate of invaders might not result in their ultimate fixation or loss but on their maintenance. Our study confirms the key results from classical population genetics and highlights that the nature of adaptation can be complex.Human Frontiers Science Program grant: (RGP0045/2010).Nature Publishing GroupARCAChelo, Ivo M.Nédli, JuditGordo, IsabelTeotónio, Henrique2015-10-26T12:26:58Z2013-09-132013-09-13T00:00:00Zinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articleapplication/pdfhttp://hdl.handle.net/10400.7/440engChelo, I. M. et al. An experimental test on the probability of extinction of new genetic variants. Nat. Commun. 4:2417 doi: 10.1038/ncomms3417 (2013).10.1038/ncomms3417info:eu-repo/semantics/openAccessreponame:Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)instname:Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãoinstacron:RCAAP2022-11-29T14:34:50Zoai:arca.igc.gulbenkian.pt:10400.7/440Portal AgregadorONGhttps://www.rcaap.pt/oai/openaireopendoar:71602024-03-19T16:11:43.721746Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) - Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãofalse
dc.title.none.fl_str_mv An experimental test on the probability of extinction of new genetic variants
title An experimental test on the probability of extinction of new genetic variants
spellingShingle An experimental test on the probability of extinction of new genetic variants
Chelo, Ivo M.
Extinction, Biological
Genetic Variation
Probability
title_short An experimental test on the probability of extinction of new genetic variants
title_full An experimental test on the probability of extinction of new genetic variants
title_fullStr An experimental test on the probability of extinction of new genetic variants
title_full_unstemmed An experimental test on the probability of extinction of new genetic variants
title_sort An experimental test on the probability of extinction of new genetic variants
author Chelo, Ivo M.
author_facet Chelo, Ivo M.
Nédli, Judit
Gordo, Isabel
Teotónio, Henrique
author_role author
author2 Nédli, Judit
Gordo, Isabel
Teotónio, Henrique
author2_role author
author
author
dc.contributor.none.fl_str_mv ARCA
dc.contributor.author.fl_str_mv Chelo, Ivo M.
Nédli, Judit
Gordo, Isabel
Teotónio, Henrique
dc.subject.por.fl_str_mv Extinction, Biological
Genetic Variation
Probability
topic Extinction, Biological
Genetic Variation
Probability
description In 1927, J.B.S. Haldane reasoned that the probability of fixation of new beneficial alleles is twice their fitness effect. This result, later generalized by M. Kimura, has since become the cornerstone of modern population genetics. There is no experimental test of Haldane's insight that new beneficial alleles are lost with high probability. Here we demonstrate that extinction rates decrease with increasing initial numbers of beneficial alleles, as expected, by performing invasion experiments with inbred lines of the nematode Caenorhabditis elegans. We further show that the extinction rates of deleterious alleles are higher than those of beneficial alleles, also as expected. Interestingly, we also find that for these inbred lines, when at intermediate frequencies, the fate of invaders might not result in their ultimate fixation or loss but on their maintenance. Our study confirms the key results from classical population genetics and highlights that the nature of adaptation can be complex.
publishDate 2013
dc.date.none.fl_str_mv 2013-09-13
2013-09-13T00:00:00Z
2015-10-26T12:26:58Z
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
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dc.identifier.uri.fl_str_mv http://hdl.handle.net/10400.7/440
url http://hdl.handle.net/10400.7/440
dc.language.iso.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv Chelo, I. M. et al. An experimental test on the probability of extinction of new genetic variants. Nat. Commun. 4:2417 doi: 10.1038/ncomms3417 (2013).
10.1038/ncomms3417
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publisher.none.fl_str_mv Nature Publishing Group
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