The sponge microbiome within the greater coral reef microbial metacommunity

Detalhes bibliográficos
Autor(a) principal: Cleary, Daniel F. R.
Data de Publicação: 2019
Outros Autores: Swierts, Thomas, Coelho, Francisco J. R. C., Polónia, Ana R. M., Huang, Yusheng M., Ferreira, Marina R. S., Putchakarn, Sumaitt, Carvalheiro, Luis, van der Ent, Esther, Ueng, Jinn-Pyng, Gomes, Newton C. M., de Voogd, Nicole J.
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
Texto Completo: http://hdl.handle.net/10773/28176
Resumo: Much recent marine microbial research has focused on sponges, but very little is known about how the sponge microbiome fits in the greater coral reef microbial metacommunity. Here, we present an extensive survey of the prokaryote communities of a wide range of biotopes from Indo-Pacific coral reef environments. We find a large variation in operational taxonomic unit (OTU) richness, with algae, chitons, stony corals and sea cucumbers housing the most diverse prokaryote communities. These biotopes share a higher percentage and number of OTUs with sediment and are particularly enriched in members of the phylum Planctomycetes. Despite having lower OTU richness, sponges share the greatest percentage (>90%) of OTUs with >100 sequences with the environment (sediment and/or seawater) although there is considerable variation among sponge species. Our results, furthermore, highlight that prokaryote microorganisms are shared among multiple coral reef biotopes, and that, although compositionally distinct, the sponge prokaryote community does not appear to be as sponge-specific as previously thought.
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spelling The sponge microbiome within the greater coral reef microbial metacommunityMuch recent marine microbial research has focused on sponges, but very little is known about how the sponge microbiome fits in the greater coral reef microbial metacommunity. Here, we present an extensive survey of the prokaryote communities of a wide range of biotopes from Indo-Pacific coral reef environments. We find a large variation in operational taxonomic unit (OTU) richness, with algae, chitons, stony corals and sea cucumbers housing the most diverse prokaryote communities. These biotopes share a higher percentage and number of OTUs with sediment and are particularly enriched in members of the phylum Planctomycetes. Despite having lower OTU richness, sponges share the greatest percentage (>90%) of OTUs with >100 sequences with the environment (sediment and/or seawater) although there is considerable variation among sponge species. Our results, furthermore, highlight that prokaryote microorganisms are shared among multiple coral reef biotopes, and that, although compositionally distinct, the sponge prokaryote community does not appear to be as sponge-specific as previously thought.Nature Research2020-04-03T10:19:14Z2019-01-01T00:00:00Z2019info:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articleapplication/pdfhttp://hdl.handle.net/10773/28176eng10.1038/s41467-019-09537-8Cleary, Daniel F. R.Swierts, ThomasCoelho, Francisco J. R. C.Polónia, Ana R. M.Huang, Yusheng M.Ferreira, Marina R. S.Putchakarn, SumaittCarvalheiro, Luisvan der Ent, EstherUeng, Jinn-PyngGomes, Newton C. M.de Voogd, Nicole J.info:eu-repo/semantics/openAccessreponame:Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)instname:Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãoinstacron:RCAAP2024-02-22T11:54:32Zoai:ria.ua.pt:10773/28176Portal AgregadorONGhttps://www.rcaap.pt/oai/openaireopendoar:71602024-03-20T03:00:47.577826Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) - Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãofalse
dc.title.none.fl_str_mv The sponge microbiome within the greater coral reef microbial metacommunity
title The sponge microbiome within the greater coral reef microbial metacommunity
spellingShingle The sponge microbiome within the greater coral reef microbial metacommunity
Cleary, Daniel F. R.
title_short The sponge microbiome within the greater coral reef microbial metacommunity
title_full The sponge microbiome within the greater coral reef microbial metacommunity
title_fullStr The sponge microbiome within the greater coral reef microbial metacommunity
title_full_unstemmed The sponge microbiome within the greater coral reef microbial metacommunity
title_sort The sponge microbiome within the greater coral reef microbial metacommunity
author Cleary, Daniel F. R.
author_facet Cleary, Daniel F. R.
Swierts, Thomas
Coelho, Francisco J. R. C.
Polónia, Ana R. M.
Huang, Yusheng M.
Ferreira, Marina R. S.
Putchakarn, Sumaitt
Carvalheiro, Luis
van der Ent, Esther
Ueng, Jinn-Pyng
Gomes, Newton C. M.
de Voogd, Nicole J.
author_role author
author2 Swierts, Thomas
Coelho, Francisco J. R. C.
Polónia, Ana R. M.
Huang, Yusheng M.
Ferreira, Marina R. S.
Putchakarn, Sumaitt
Carvalheiro, Luis
van der Ent, Esther
Ueng, Jinn-Pyng
Gomes, Newton C. M.
de Voogd, Nicole J.
author2_role author
author
author
author
author
author
author
author
author
author
author
dc.contributor.author.fl_str_mv Cleary, Daniel F. R.
Swierts, Thomas
Coelho, Francisco J. R. C.
Polónia, Ana R. M.
Huang, Yusheng M.
Ferreira, Marina R. S.
Putchakarn, Sumaitt
Carvalheiro, Luis
van der Ent, Esther
Ueng, Jinn-Pyng
Gomes, Newton C. M.
de Voogd, Nicole J.
description Much recent marine microbial research has focused on sponges, but very little is known about how the sponge microbiome fits in the greater coral reef microbial metacommunity. Here, we present an extensive survey of the prokaryote communities of a wide range of biotopes from Indo-Pacific coral reef environments. We find a large variation in operational taxonomic unit (OTU) richness, with algae, chitons, stony corals and sea cucumbers housing the most diverse prokaryote communities. These biotopes share a higher percentage and number of OTUs with sediment and are particularly enriched in members of the phylum Planctomycetes. Despite having lower OTU richness, sponges share the greatest percentage (>90%) of OTUs with >100 sequences with the environment (sediment and/or seawater) although there is considerable variation among sponge species. Our results, furthermore, highlight that prokaryote microorganisms are shared among multiple coral reef biotopes, and that, although compositionally distinct, the sponge prokaryote community does not appear to be as sponge-specific as previously thought.
publishDate 2019
dc.date.none.fl_str_mv 2019-01-01T00:00:00Z
2019
2020-04-03T10:19:14Z
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dc.identifier.uri.fl_str_mv http://hdl.handle.net/10773/28176
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dc.relation.none.fl_str_mv 10.1038/s41467-019-09537-8
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dc.publisher.none.fl_str_mv Nature Research
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