Lumen segmentation in magnetic resonance images of the carotid artery

Detalhes bibliográficos
Autor(a) principal: Danilo Samuel Jodas
Data de Publicação: 2016
Outros Autores: Aledir Silveira Pereira, João Manuel R. S. Tavares
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
Texto Completo: https://hdl.handle.net/10216/86088
Resumo: Investigation of the carotid artery plays an important role in the diagnosis of cerebrovascular events. Segmentation of the lumen and vessel wall in Magnetic Resonance (MR) images is the first step towards evaluating any possible cardiovascular diseases like atherosclerosis. However, the automatic segmentation of the lumen is still a challenge due to the low quality of the images and the presence of other elements such as stenosis and malformations that compromise the accuracy of the results. In this article, a method to identify the location of the lumen without user interaction is presented. The proposed method uses the modified mean roundness to calculate the circularity index of the regions identified by the K-means algorithm and return the one with the maximum value, i.e. the potential lumen region. Then, an active contour is employed to refine the boundary of this region. The method achieved an average Dice coefficient of 0.78 +/- 0.14 and 0.61 +/- 0.21 in 181 3D-T1-weighted and 181 proton density-weighted MR images, respectively. The results show that this method is promising for the correct identification and location of the lumen even in images corrupted by noise.
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spelling Lumen segmentation in magnetic resonance images of the carotid arteryCiências Tecnológicas, Ciências médicas e da saúdeTechnological sciences, Medical and Health sciencesInvestigation of the carotid artery plays an important role in the diagnosis of cerebrovascular events. Segmentation of the lumen and vessel wall in Magnetic Resonance (MR) images is the first step towards evaluating any possible cardiovascular diseases like atherosclerosis. However, the automatic segmentation of the lumen is still a challenge due to the low quality of the images and the presence of other elements such as stenosis and malformations that compromise the accuracy of the results. In this article, a method to identify the location of the lumen without user interaction is presented. The proposed method uses the modified mean roundness to calculate the circularity index of the regions identified by the K-means algorithm and return the one with the maximum value, i.e. the potential lumen region. Then, an active contour is employed to refine the boundary of this region. The method achieved an average Dice coefficient of 0.78 +/- 0.14 and 0.61 +/- 0.21 in 181 3D-T1-weighted and 181 proton density-weighted MR images, respectively. The results show that this method is promising for the correct identification and location of the lumen even in images corrupted by noise.2016-122016-12-01T00:00:00Zinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articleimage/pngapplication/pdfhttps://hdl.handle.net/10216/86088eng0010-482510.1016/j.compbiomed.2016.10.021Danilo Samuel JodasAledir Silveira PereiraJoão Manuel R. S. Tavaresinfo:eu-repo/semantics/openAccessreponame:Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)instname:Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãoinstacron:RCAAP2023-11-29T14:30:21Zoai:repositorio-aberto.up.pt:10216/86088Portal AgregadorONGhttps://www.rcaap.pt/oai/openaireopendoar:71602024-03-20T00:02:42.824838Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) - Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãofalse
dc.title.none.fl_str_mv Lumen segmentation in magnetic resonance images of the carotid artery
title Lumen segmentation in magnetic resonance images of the carotid artery
spellingShingle Lumen segmentation in magnetic resonance images of the carotid artery
Danilo Samuel Jodas
Ciências Tecnológicas, Ciências médicas e da saúde
Technological sciences, Medical and Health sciences
title_short Lumen segmentation in magnetic resonance images of the carotid artery
title_full Lumen segmentation in magnetic resonance images of the carotid artery
title_fullStr Lumen segmentation in magnetic resonance images of the carotid artery
title_full_unstemmed Lumen segmentation in magnetic resonance images of the carotid artery
title_sort Lumen segmentation in magnetic resonance images of the carotid artery
author Danilo Samuel Jodas
author_facet Danilo Samuel Jodas
Aledir Silveira Pereira
João Manuel R. S. Tavares
author_role author
author2 Aledir Silveira Pereira
João Manuel R. S. Tavares
author2_role author
author
dc.contributor.author.fl_str_mv Danilo Samuel Jodas
Aledir Silveira Pereira
João Manuel R. S. Tavares
dc.subject.por.fl_str_mv Ciências Tecnológicas, Ciências médicas e da saúde
Technological sciences, Medical and Health sciences
topic Ciências Tecnológicas, Ciências médicas e da saúde
Technological sciences, Medical and Health sciences
description Investigation of the carotid artery plays an important role in the diagnosis of cerebrovascular events. Segmentation of the lumen and vessel wall in Magnetic Resonance (MR) images is the first step towards evaluating any possible cardiovascular diseases like atherosclerosis. However, the automatic segmentation of the lumen is still a challenge due to the low quality of the images and the presence of other elements such as stenosis and malformations that compromise the accuracy of the results. In this article, a method to identify the location of the lumen without user interaction is presented. The proposed method uses the modified mean roundness to calculate the circularity index of the regions identified by the K-means algorithm and return the one with the maximum value, i.e. the potential lumen region. Then, an active contour is employed to refine the boundary of this region. The method achieved an average Dice coefficient of 0.78 +/- 0.14 and 0.61 +/- 0.21 in 181 3D-T1-weighted and 181 proton density-weighted MR images, respectively. The results show that this method is promising for the correct identification and location of the lumen even in images corrupted by noise.
publishDate 2016
dc.date.none.fl_str_mv 2016-12
2016-12-01T00:00:00Z
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10.1016/j.compbiomed.2016.10.021
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