Inclusion of genetic relationship information in the pedigree selection method using mixed models

Detalhes bibliográficos
Autor(a) principal: Nunes,José Airton Rodrigues
Data de Publicação: 2008
Outros Autores: Ramalho,Magno Antonio Patto, Ferreira,Daniel Furtado
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Genetics and Molecular Biology
Texto Completo: http://old.scielo.br/scielo.php?script=sci_arttext&pid=S1415-47572008000100015
Resumo: We used a mixed model approach and computer simulation to evaluate the inclusion of parentage information as determined by the genealogy established in the pedigree method. The simulations were based on a purely additive genetic model for one quantitative trait of 20 unlinked segregating loci with equal effects and an allelic frequency of 0.5 for heritability values of 10%, 25%, 50% and 75% for selection based on an F4:5 progeny mean. We simulated 1000 experiments for each heritability value, corresponding to the evaluation of 256 F4:5 progenies. The phenotypic values of the progenies were analyzed according to two models, one ignoring and one considering the additive genetic parentage among the progenies. The additive relationship coefficients among F4:5 progenies ranged from 0.0 to 1.75. The evaluated selection procedures were the phenotypic progeny mean (M) and the best linear unbiased predictor including parentage (BLUP A). The inclusion of parentage among progenies using the BLUP A procedure resulted in higher selection gains than when the relationship information was ignored, which possibly recompenses the additional work invested to obtain these records, above all in the case of low - heritability traits.
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spelling Inclusion of genetic relationship information in the pedigree selection method using mixed modelsautogamous cropsBLUPcomputer simulationplant breedingWe used a mixed model approach and computer simulation to evaluate the inclusion of parentage information as determined by the genealogy established in the pedigree method. The simulations were based on a purely additive genetic model for one quantitative trait of 20 unlinked segregating loci with equal effects and an allelic frequency of 0.5 for heritability values of 10%, 25%, 50% and 75% for selection based on an F4:5 progeny mean. We simulated 1000 experiments for each heritability value, corresponding to the evaluation of 256 F4:5 progenies. The phenotypic values of the progenies were analyzed according to two models, one ignoring and one considering the additive genetic parentage among the progenies. The additive relationship coefficients among F4:5 progenies ranged from 0.0 to 1.75. The evaluated selection procedures were the phenotypic progeny mean (M) and the best linear unbiased predictor including parentage (BLUP A). The inclusion of parentage among progenies using the BLUP A procedure resulted in higher selection gains than when the relationship information was ignored, which possibly recompenses the additional work invested to obtain these records, above all in the case of low - heritability traits.Sociedade Brasileira de Genética2008-01-01info:eu-repo/semantics/articleinfo:eu-repo/semantics/publishedVersiontext/htmlhttp://old.scielo.br/scielo.php?script=sci_arttext&pid=S1415-47572008000100015Genetics and Molecular Biology v.31 n.1 2008reponame:Genetics and Molecular Biologyinstname:Sociedade Brasileira de Genética (SBG)instacron:SBG10.1590/S1415-47572008000100015info:eu-repo/semantics/openAccessNunes,José Airton RodriguesRamalho,Magno Antonio PattoFerreira,Daniel Furtadoeng2008-02-28T00:00:00Zoai:scielo:S1415-47572008000100015Revistahttp://www.gmb.org.br/ONGhttps://old.scielo.br/oai/scielo-oai.php||editor@gmb.org.br1678-46851415-4757opendoar:2008-02-28T00:00Genetics and Molecular Biology - Sociedade Brasileira de Genética (SBG)false
dc.title.none.fl_str_mv Inclusion of genetic relationship information in the pedigree selection method using mixed models
title Inclusion of genetic relationship information in the pedigree selection method using mixed models
spellingShingle Inclusion of genetic relationship information in the pedigree selection method using mixed models
Nunes,José Airton Rodrigues
autogamous crops
BLUP
computer simulation
plant breeding
title_short Inclusion of genetic relationship information in the pedigree selection method using mixed models
title_full Inclusion of genetic relationship information in the pedigree selection method using mixed models
title_fullStr Inclusion of genetic relationship information in the pedigree selection method using mixed models
title_full_unstemmed Inclusion of genetic relationship information in the pedigree selection method using mixed models
title_sort Inclusion of genetic relationship information in the pedigree selection method using mixed models
author Nunes,José Airton Rodrigues
author_facet Nunes,José Airton Rodrigues
Ramalho,Magno Antonio Patto
Ferreira,Daniel Furtado
author_role author
author2 Ramalho,Magno Antonio Patto
Ferreira,Daniel Furtado
author2_role author
author
dc.contributor.author.fl_str_mv Nunes,José Airton Rodrigues
Ramalho,Magno Antonio Patto
Ferreira,Daniel Furtado
dc.subject.por.fl_str_mv autogamous crops
BLUP
computer simulation
plant breeding
topic autogamous crops
BLUP
computer simulation
plant breeding
description We used a mixed model approach and computer simulation to evaluate the inclusion of parentage information as determined by the genealogy established in the pedigree method. The simulations were based on a purely additive genetic model for one quantitative trait of 20 unlinked segregating loci with equal effects and an allelic frequency of 0.5 for heritability values of 10%, 25%, 50% and 75% for selection based on an F4:5 progeny mean. We simulated 1000 experiments for each heritability value, corresponding to the evaluation of 256 F4:5 progenies. The phenotypic values of the progenies were analyzed according to two models, one ignoring and one considering the additive genetic parentage among the progenies. The additive relationship coefficients among F4:5 progenies ranged from 0.0 to 1.75. The evaluated selection procedures were the phenotypic progeny mean (M) and the best linear unbiased predictor including parentage (BLUP A). The inclusion of parentage among progenies using the BLUP A procedure resulted in higher selection gains than when the relationship information was ignored, which possibly recompenses the additional work invested to obtain these records, above all in the case of low - heritability traits.
publishDate 2008
dc.date.none.fl_str_mv 2008-01-01
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv http://old.scielo.br/scielo.php?script=sci_arttext&pid=S1415-47572008000100015
url http://old.scielo.br/scielo.php?script=sci_arttext&pid=S1415-47572008000100015
dc.language.iso.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv 10.1590/S1415-47572008000100015
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
eu_rights_str_mv openAccess
dc.format.none.fl_str_mv text/html
dc.publisher.none.fl_str_mv Sociedade Brasileira de Genética
publisher.none.fl_str_mv Sociedade Brasileira de Genética
dc.source.none.fl_str_mv Genetics and Molecular Biology v.31 n.1 2008
reponame:Genetics and Molecular Biology
instname:Sociedade Brasileira de Genética (SBG)
instacron:SBG
instname_str Sociedade Brasileira de Genética (SBG)
instacron_str SBG
institution SBG
reponame_str Genetics and Molecular Biology
collection Genetics and Molecular Biology
repository.name.fl_str_mv Genetics and Molecular Biology - Sociedade Brasileira de Genética (SBG)
repository.mail.fl_str_mv ||editor@gmb.org.br
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