Mapping of QTL for total spikelet number per spike on chromosome 2D in wheat using a high-density genetic map

Detalhes bibliográficos
Autor(a) principal: Deng,Mei
Data de Publicação: 2019
Outros Autores: Wu,Fangkun, Zhou,Wanlin, Li,Jing, Shi,Haoran, Wang,Zhiqiang, Lin,Yu, Yang,Xilan, Wei,Yuming, Zheng,Youliang, Liu,Yaxi
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Genetics and Molecular Biology
Texto Completo: http://old.scielo.br/scielo.php?script=sci_arttext&pid=S1415-47572019000400603
Resumo: Abstract Total spikelet number per spike (TSS) is one of the key components of grain yield in wheat. Chromosome (chr.) 2D contains numerous genes that control TSS. In this study, we evaluated 138 F8 recombinant inbred lines (RILs) derived from an F2 population of a synthetic hexaploid wheat line (SHW-L1) and a common wheat cultivar (Chuanmai 32) for TSS in six different environments. To identify quantitative trait loci (QTL) for TSS, we constructed an integrated high-density genetic map of chr. 2D containing two simple sequence repeats, 35 diversity array technology markers, and 143 single nucleotide polymorphisms. We identified three stable QTL for TSS that individually explained 9.7–19.2% of the phenotypic variation and predicted 23 putative candidate genes within the QTL mapping interval. Overall, our results provide insight into the genetic basis of TSS in synthetic hexaploid wheat that may be useful in breeding high-yielding wheat cultivars.
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spelling Mapping of QTL for total spikelet number per spike on chromosome 2D in wheat using a high-density genetic maprecombinant inbred linesynthetic hexaploid wheatquantitative trait locustotal spikelet number per spikeAbstract Total spikelet number per spike (TSS) is one of the key components of grain yield in wheat. Chromosome (chr.) 2D contains numerous genes that control TSS. In this study, we evaluated 138 F8 recombinant inbred lines (RILs) derived from an F2 population of a synthetic hexaploid wheat line (SHW-L1) and a common wheat cultivar (Chuanmai 32) for TSS in six different environments. To identify quantitative trait loci (QTL) for TSS, we constructed an integrated high-density genetic map of chr. 2D containing two simple sequence repeats, 35 diversity array technology markers, and 143 single nucleotide polymorphisms. We identified three stable QTL for TSS that individually explained 9.7–19.2% of the phenotypic variation and predicted 23 putative candidate genes within the QTL mapping interval. Overall, our results provide insight into the genetic basis of TSS in synthetic hexaploid wheat that may be useful in breeding high-yielding wheat cultivars.Sociedade Brasileira de Genética2019-09-01info:eu-repo/semantics/articleinfo:eu-repo/semantics/publishedVersiontext/htmlhttp://old.scielo.br/scielo.php?script=sci_arttext&pid=S1415-47572019000400603Genetics and Molecular Biology v.42 n.3 2019reponame:Genetics and Molecular Biologyinstname:Sociedade Brasileira de Genética (SBG)instacron:SBG10.1590/1678-4685-gmb-2018-0122info:eu-repo/semantics/openAccessDeng,MeiWu,FangkunZhou,WanlinLi,JingShi,HaoranWang,ZhiqiangLin,YuYang,XilanWei,YumingZheng,YouliangLiu,Yaxieng2019-11-29T00:00:00Zoai:scielo:S1415-47572019000400603Revistahttp://www.gmb.org.br/ONGhttps://old.scielo.br/oai/scielo-oai.php||editor@gmb.org.br1678-46851415-4757opendoar:2019-11-29T00:00Genetics and Molecular Biology - Sociedade Brasileira de Genética (SBG)false
dc.title.none.fl_str_mv Mapping of QTL for total spikelet number per spike on chromosome 2D in wheat using a high-density genetic map
title Mapping of QTL for total spikelet number per spike on chromosome 2D in wheat using a high-density genetic map
spellingShingle Mapping of QTL for total spikelet number per spike on chromosome 2D in wheat using a high-density genetic map
Deng,Mei
recombinant inbred line
synthetic hexaploid wheat
quantitative trait locus
total spikelet number per spike
title_short Mapping of QTL for total spikelet number per spike on chromosome 2D in wheat using a high-density genetic map
title_full Mapping of QTL for total spikelet number per spike on chromosome 2D in wheat using a high-density genetic map
title_fullStr Mapping of QTL for total spikelet number per spike on chromosome 2D in wheat using a high-density genetic map
title_full_unstemmed Mapping of QTL for total spikelet number per spike on chromosome 2D in wheat using a high-density genetic map
title_sort Mapping of QTL for total spikelet number per spike on chromosome 2D in wheat using a high-density genetic map
author Deng,Mei
author_facet Deng,Mei
Wu,Fangkun
Zhou,Wanlin
Li,Jing
Shi,Haoran
Wang,Zhiqiang
Lin,Yu
Yang,Xilan
Wei,Yuming
Zheng,Youliang
Liu,Yaxi
author_role author
author2 Wu,Fangkun
Zhou,Wanlin
Li,Jing
Shi,Haoran
Wang,Zhiqiang
Lin,Yu
Yang,Xilan
Wei,Yuming
Zheng,Youliang
Liu,Yaxi
author2_role author
author
author
author
author
author
author
author
author
author
dc.contributor.author.fl_str_mv Deng,Mei
Wu,Fangkun
Zhou,Wanlin
Li,Jing
Shi,Haoran
Wang,Zhiqiang
Lin,Yu
Yang,Xilan
Wei,Yuming
Zheng,Youliang
Liu,Yaxi
dc.subject.por.fl_str_mv recombinant inbred line
synthetic hexaploid wheat
quantitative trait locus
total spikelet number per spike
topic recombinant inbred line
synthetic hexaploid wheat
quantitative trait locus
total spikelet number per spike
description Abstract Total spikelet number per spike (TSS) is one of the key components of grain yield in wheat. Chromosome (chr.) 2D contains numerous genes that control TSS. In this study, we evaluated 138 F8 recombinant inbred lines (RILs) derived from an F2 population of a synthetic hexaploid wheat line (SHW-L1) and a common wheat cultivar (Chuanmai 32) for TSS in six different environments. To identify quantitative trait loci (QTL) for TSS, we constructed an integrated high-density genetic map of chr. 2D containing two simple sequence repeats, 35 diversity array technology markers, and 143 single nucleotide polymorphisms. We identified three stable QTL for TSS that individually explained 9.7–19.2% of the phenotypic variation and predicted 23 putative candidate genes within the QTL mapping interval. Overall, our results provide insight into the genetic basis of TSS in synthetic hexaploid wheat that may be useful in breeding high-yielding wheat cultivars.
publishDate 2019
dc.date.none.fl_str_mv 2019-09-01
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv http://old.scielo.br/scielo.php?script=sci_arttext&pid=S1415-47572019000400603
url http://old.scielo.br/scielo.php?script=sci_arttext&pid=S1415-47572019000400603
dc.language.iso.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv 10.1590/1678-4685-gmb-2018-0122
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
eu_rights_str_mv openAccess
dc.format.none.fl_str_mv text/html
dc.publisher.none.fl_str_mv Sociedade Brasileira de Genética
publisher.none.fl_str_mv Sociedade Brasileira de Genética
dc.source.none.fl_str_mv Genetics and Molecular Biology v.42 n.3 2019
reponame:Genetics and Molecular Biology
instname:Sociedade Brasileira de Genética (SBG)
instacron:SBG
instname_str Sociedade Brasileira de Genética (SBG)
instacron_str SBG
institution SBG
reponame_str Genetics and Molecular Biology
collection Genetics and Molecular Biology
repository.name.fl_str_mv Genetics and Molecular Biology - Sociedade Brasileira de Genética (SBG)
repository.mail.fl_str_mv ||editor@gmb.org.br
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