Applied immuno-epidemiological research: an approach for integrating existing knowledge into the statistical analysis of multiple immune markers

Detalhes bibliográficos
Autor(a) principal: Genser, Bernd
Data de Publicação: 2016
Outros Autores: Fischer, Joachim E., Figueiredo, Camila A., Alcântara-Neves, Neuza Maria, Barreto, Mauricio L., Philip J. Cooper, Philip J. Cooper, et al.
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Institucional da UFBA
Texto Completo: http://repositorio.ufba.br/ri/handle/ri/22752
Resumo: Background: Immunologists often measure several correlated immunological markers, such as concentrations of different cytokines produced by different immune cells and/or measured under different conditions, to draw insights from complex immunological mechanisms. Although there have been recent methodological efforts to improve the statistical analysis of immunological data, a framework is still needed for the simultaneous analysis of multiple, often correlated, immune markers. This framework would allow the immunologists’ hypotheses about the underlying biological mechanisms to be integrated. Results: We present an analytical approach for statistical analys is of correlated immune markers, such as those commonly collected in modern immuno-epidemiological studies. We demonstrate i) how to deal with interdependencies among multiple measurements of the same immune marker, ii) how to analyse association patterns among different markers, iii) how to aggregate different measures and/or markers to immunological summary scores, iv) how to model the inter-relationships among these scores, and v) how to use these scores in epidemiological association analyses. We illustrate the application of our approach to multiple cytokine measurements from 818 children enrolled in a large immuno-epidemiological study (SCAALA Salvador), which aimed to quantify the major immunological mechanisms underlying atopic diseases or asthma. We demonstrate how to aggregate systematically the information captured in multiple cytokine measurements to immunological summary scores aimed at reflecting the presumed underlying immunological mechanisms (Th1/Th2 balance and immune regulatory network). We show how these aggregated immune scores can be used as predictors in regression models with outcomes of immunological studies (e.g. specific IgE) and compare the results to those obtained by a traditional multivariate regression approach. Conclusion: The proposed analytical approach may be especially useful to quantify complex immune responses in immuno-epidemiological studies, where investigators examine the relationship among epidemiological patterns, immune response, and disease outcomes.
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spelling Genser, BerndFischer, Joachim E.Figueiredo, Camila A.Alcântara-Neves, Neuza MariaBarreto, Mauricio L.Philip J. Cooper, Philip J. Cooper, et al.Genser, BerndFischer, Joachim E.Figueiredo, Camila A.Alcântara-Neves, Neuza MariaBarreto, Mauricio L.Philip J. Cooper, Philip J. Cooper, et al.2017-06-05T12:30:49Z2017-06-05T12:30:49Z20161471-2172http://repositorio.ufba.br/ri/handle/ri/22752v.17, n.1, p.1-14, 2016Background: Immunologists often measure several correlated immunological markers, such as concentrations of different cytokines produced by different immune cells and/or measured under different conditions, to draw insights from complex immunological mechanisms. Although there have been recent methodological efforts to improve the statistical analysis of immunological data, a framework is still needed for the simultaneous analysis of multiple, often correlated, immune markers. This framework would allow the immunologists’ hypotheses about the underlying biological mechanisms to be integrated. Results: We present an analytical approach for statistical analys is of correlated immune markers, such as those commonly collected in modern immuno-epidemiological studies. We demonstrate i) how to deal with interdependencies among multiple measurements of the same immune marker, ii) how to analyse association patterns among different markers, iii) how to aggregate different measures and/or markers to immunological summary scores, iv) how to model the inter-relationships among these scores, and v) how to use these scores in epidemiological association analyses. We illustrate the application of our approach to multiple cytokine measurements from 818 children enrolled in a large immuno-epidemiological study (SCAALA Salvador), which aimed to quantify the major immunological mechanisms underlying atopic diseases or asthma. We demonstrate how to aggregate systematically the information captured in multiple cytokine measurements to immunological summary scores aimed at reflecting the presumed underlying immunological mechanisms (Th1/Th2 balance and immune regulatory network). We show how these aggregated immune scores can be used as predictors in regression models with outcomes of immunological studies (e.g. specific IgE) and compare the results to those obtained by a traditional multivariate regression approach. Conclusion: The proposed analytical approach may be especially useful to quantify complex immune responses in immuno-epidemiological studies, where investigators examine the relationship among epidemiological patterns, immune response, and disease outcomes.Submitted by Maria Creuza Silva (mariakreuza@yahoo.com.br) on 2017-06-05T12:30:49Z No. of bitstreams: 1 Mauricio Barreto. 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dc.title.pt_BR.fl_str_mv Applied immuno-epidemiological research: an approach for integrating existing knowledge into the statistical analysis of multiple immune markers
dc.title.alternative.pt_BR.fl_str_mv BMC Immunol.
title Applied immuno-epidemiological research: an approach for integrating existing knowledge into the statistical analysis of multiple immune markers
spellingShingle Applied immuno-epidemiological research: an approach for integrating existing knowledge into the statistical analysis of multiple immune markers
Genser, Bernd
Immuno-epidemiology
Correlated immune markers
Cytokines
Statistical analysis
Conceptual frameworks
title_short Applied immuno-epidemiological research: an approach for integrating existing knowledge into the statistical analysis of multiple immune markers
title_full Applied immuno-epidemiological research: an approach for integrating existing knowledge into the statistical analysis of multiple immune markers
title_fullStr Applied immuno-epidemiological research: an approach for integrating existing knowledge into the statistical analysis of multiple immune markers
title_full_unstemmed Applied immuno-epidemiological research: an approach for integrating existing knowledge into the statistical analysis of multiple immune markers
title_sort Applied immuno-epidemiological research: an approach for integrating existing knowledge into the statistical analysis of multiple immune markers
author Genser, Bernd
author_facet Genser, Bernd
Fischer, Joachim E.
Figueiredo, Camila A.
Alcântara-Neves, Neuza Maria
Barreto, Mauricio L.
Philip J. Cooper, Philip J. Cooper, et al.
author_role author
author2 Fischer, Joachim E.
Figueiredo, Camila A.
Alcântara-Neves, Neuza Maria
Barreto, Mauricio L.
Philip J. Cooper, Philip J. Cooper, et al.
author2_role author
author
author
author
author
dc.contributor.author.fl_str_mv Genser, Bernd
Fischer, Joachim E.
Figueiredo, Camila A.
Alcântara-Neves, Neuza Maria
Barreto, Mauricio L.
Philip J. Cooper, Philip J. Cooper, et al.
Genser, Bernd
Fischer, Joachim E.
Figueiredo, Camila A.
Alcântara-Neves, Neuza Maria
Barreto, Mauricio L.
Philip J. Cooper, Philip J. Cooper, et al.
dc.subject.por.fl_str_mv Immuno-epidemiology
Correlated immune markers
Cytokines
Statistical analysis
Conceptual frameworks
topic Immuno-epidemiology
Correlated immune markers
Cytokines
Statistical analysis
Conceptual frameworks
description Background: Immunologists often measure several correlated immunological markers, such as concentrations of different cytokines produced by different immune cells and/or measured under different conditions, to draw insights from complex immunological mechanisms. Although there have been recent methodological efforts to improve the statistical analysis of immunological data, a framework is still needed for the simultaneous analysis of multiple, often correlated, immune markers. This framework would allow the immunologists’ hypotheses about the underlying biological mechanisms to be integrated. Results: We present an analytical approach for statistical analys is of correlated immune markers, such as those commonly collected in modern immuno-epidemiological studies. We demonstrate i) how to deal with interdependencies among multiple measurements of the same immune marker, ii) how to analyse association patterns among different markers, iii) how to aggregate different measures and/or markers to immunological summary scores, iv) how to model the inter-relationships among these scores, and v) how to use these scores in epidemiological association analyses. We illustrate the application of our approach to multiple cytokine measurements from 818 children enrolled in a large immuno-epidemiological study (SCAALA Salvador), which aimed to quantify the major immunological mechanisms underlying atopic diseases or asthma. We demonstrate how to aggregate systematically the information captured in multiple cytokine measurements to immunological summary scores aimed at reflecting the presumed underlying immunological mechanisms (Th1/Th2 balance and immune regulatory network). We show how these aggregated immune scores can be used as predictors in regression models with outcomes of immunological studies (e.g. specific IgE) and compare the results to those obtained by a traditional multivariate regression approach. Conclusion: The proposed analytical approach may be especially useful to quantify complex immune responses in immuno-epidemiological studies, where investigators examine the relationship among epidemiological patterns, immune response, and disease outcomes.
publishDate 2016
dc.date.issued.fl_str_mv 2016
dc.date.accessioned.fl_str_mv 2017-06-05T12:30:49Z
dc.date.available.fl_str_mv 2017-06-05T12:30:49Z
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dc.identifier.uri.fl_str_mv http://repositorio.ufba.br/ri/handle/ri/22752
dc.identifier.issn.none.fl_str_mv 1471-2172
dc.identifier.number.pt_BR.fl_str_mv v.17, n.1, p.1-14, 2016
identifier_str_mv 1471-2172
v.17, n.1, p.1-14, 2016
url http://repositorio.ufba.br/ri/handle/ri/22752
dc.language.iso.fl_str_mv eng
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dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
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dc.publisher.country.fl_str_mv Brasil
dc.source.pt_BR.fl_str_mv https://www.ncbi.nlm.nih.gov/pubmed/27206492
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