Filogeografia de Pterodon emarginatus e Pterodon pubescens (Leguminosae)

Detalhes bibliográficos
Autor(a) principal: Lima, Stefany Lorrayny
Data de Publicação: 2019
Tipo de documento: Tese
Idioma: por
Título da fonte: Repositório Institucional da UFG
dARK ID: ark:/38995/0013000002nwd
Texto Completo: http://repositorio.bc.ufg.br/tede/handle/tede/10296
Resumo: The species Pterodon emarginatus and P. pubescens, known as sucupira, occur in the Cerrado and have potential for medicinal and wood use. The comparative phylogeography of these species can help in understanding the historical pattern of distribution of genetic diversity, generating information for use and conservation. The objective of this work was to identify the phylogeographic structure of P. emarginatus and P. pubescens, and the comparative phylogeography of these species. The sample consisted of eleven populations for P. emarginatus and nineteen for P. pubescens, distributed in the states of Goiás, Tocantins, Bahia, Mato Grosso and Minas Gerais. The chloroplast regions sequenced were trnLE-trnLF and psbA-trnH, and the nuclear ribosomal was ITS101-102. In P. emarginatus, haplotypic and nucleotide diversity are high in chloroplast, as there is a high polymorphism in this region, with a high number of indels. The population structure is relatively low (FST = 0.10). In this species the populations Alvorada do Norte-GO, Cariri-TO, Luiz Eduardo Magalhães-BA and Monte Alegre de Goiás-GO stand out for genetic diversity and are located in an area of climate stability, influencing the evolutionary dynamics of the Cerrado. The dispersal has long distance potential (500 km). The demographic pattern has shown population growth for less than 150 a thousand years. In P. pubescens the haplotypic and nucleotide diversity are high in chloroplast and nucleus, with a high number of haplotypes. The population genetic structure is considerable (FST = 0.24), with a phylogeographic pattern marked by the divergence of populations of the Araguaia basin region, an area of influence on the Cerrado evolutionary dynamics, mainly Araguapaz-GO and Araguaiana-MT. Demographic history has shown population growth from 1.67 million years ago. Finally, P. emarginatus showed a higher diversity pattern in chloroplast, while in P. pubescens there was a high complexity of the phylogeographic pattern, and the population of Araguaiana-MT showed a high genetic distance. Despite the species separation, there is a highlight for populations that exhibit high haplotype sharing, mainly Araguaiana-MT and Araguapaz-GO. The species tree showed no distinction between species, corroborating the hypothesis of recent diversification. Comparative analysis of species suggests ancestral introgression or polymorphism, considering the high sharing of haplotypes. These species are possibly in the process of recent separation, and P. emarginatus is the species in the process of speciation.
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spelling Soares, Thannya Nascimentohttp://lattes.cnpq.br/5590256762396056Soares, Thannya NascimentoTelles, Mariana Pires De CamposRocha, Dulce Maria Sucena daMansano, Vidal de FreitasJardim, Tatianne Piza Ferrari Abreuhttp://lattes.cnpq.br/8123153874741152Lima, Stefany Lorrayny2020-01-14T11:50:49Z2019-12-06LIMA, Stefany Lorrayny. Filogeografia de Pterodon emarginatus e Pterodon pubescens (Leguminosae). 2019. 119 f. Tese (Doutorado em Genética e Melhoramento de Plantas) - Universidade Federal de Goiás, Goiânia, 2019.http://repositorio.bc.ufg.br/tede/handle/tede/10296ark:/38995/0013000002nwdThe species Pterodon emarginatus and P. pubescens, known as sucupira, occur in the Cerrado and have potential for medicinal and wood use. The comparative phylogeography of these species can help in understanding the historical pattern of distribution of genetic diversity, generating information for use and conservation. The objective of this work was to identify the phylogeographic structure of P. emarginatus and P. pubescens, and the comparative phylogeography of these species. The sample consisted of eleven populations for P. emarginatus and nineteen for P. pubescens, distributed in the states of Goiás, Tocantins, Bahia, Mato Grosso and Minas Gerais. The chloroplast regions sequenced were trnLE-trnLF and psbA-trnH, and the nuclear ribosomal was ITS101-102. In P. emarginatus, haplotypic and nucleotide diversity are high in chloroplast, as there is a high polymorphism in this region, with a high number of indels. The population structure is relatively low (FST = 0.10). In this species the populations Alvorada do Norte-GO, Cariri-TO, Luiz Eduardo Magalhães-BA and Monte Alegre de Goiás-GO stand out for genetic diversity and are located in an area of climate stability, influencing the evolutionary dynamics of the Cerrado. The dispersal has long distance potential (500 km). The demographic pattern has shown population growth for less than 150 a thousand years. In P. pubescens the haplotypic and nucleotide diversity are high in chloroplast and nucleus, with a high number of haplotypes. The population genetic structure is considerable (FST = 0.24), with a phylogeographic pattern marked by the divergence of populations of the Araguaia basin region, an area of influence on the Cerrado evolutionary dynamics, mainly Araguapaz-GO and Araguaiana-MT. Demographic history has shown population growth from 1.67 million years ago. Finally, P. emarginatus showed a higher diversity pattern in chloroplast, while in P. pubescens there was a high complexity of the phylogeographic pattern, and the population of Araguaiana-MT showed a high genetic distance. Despite the species separation, there is a highlight for populations that exhibit high haplotype sharing, mainly Araguaiana-MT and Araguapaz-GO. The species tree showed no distinction between species, corroborating the hypothesis of recent diversification. Comparative analysis of species suggests ancestral introgression or polymorphism, considering the high sharing of haplotypes. These species are possibly in the process of recent separation, and P. emarginatus is the species in the process of speciation.As espécies irmãs, Pterodon emarginatus e P. pubescens, conhecidas como sucupira, ocorrem no Cerrado e têm amplo potencial de uso, principalmente medicinal e madeireiro. A filogeografia comparada dessas espécies contribui com a compreensão do padrão histórico de distribuição da diversidade genética, gerando informações para o uso e conservação. O objetivo desse trabalho foi conhecer a estrutura filogeográfica de P. emarginatus e P. pubescens, além de realizar a filogeografia comparada entre elas. Foram amostradas 11 populações de P. emarginatus e 19 de P. pubescens, distribuídas nos Estados de Goiás, Tocantins, Bahia, Mato Grosso e Minas Gerais. As regiões cloroplastidiais sequenciadas foram a trnLE- trnLF e a psbA-trnH, e a ribossômica nuclear foi a ITS101-102. Em P. emarginatus a diversidade haplotípica e nucleotídica são altas no cloroplasto, visto alto polimorfismo nessa região, com elevado número de indels. A estruturação genética populacional é relativamente baixa (FST = 0,10). Nessa espécie as populações Alvorada do Norte-GO, Cariri-TO, Luiz Eduardo Magalhães-BA e Monte Alegre de Goiás-GO se destacam quanto à diversidade genética e se inserem em área de estabilidade climática, influenciadora da dinâmica evolutiva do Cerrado. A dispersão pode chegar a longas distâncias, até 500 km. O padrão demográfico foi de crescimento populacional há cerca de 150 mil anos. Em P. pubescens a diversidade haplotípica e nucleotídica são altas no cloroplasto e no núcleo, com elevado número de haplótipos. A estruturação genética populacional é considerável (FST = 0,24), com padrão filogeográfico marcado pela divergência das populações da região da bacia do Araguaia, uma área de influência na dinâmica evolutiva do Cerrado, principalmente Araguapaz-GO e AraguaianaMT. A história demográfica mostrou crescimento populacional constante com expansão a partir de 1,67 milhões de anos atrás. A espécie P. emarginatus se destaca pelo padrão de maior diversidade no cloroplasto, enquanto em P. pubescens houve alta complexidade do padrão filogeográfico, e a população de Araguaiana-MT se destacou quanto a distância genética. Apesar da separação de espécies, ocorre destaque para populações que exibem alto compartilhamento de haplótipos, principalmente Araguaiana-MT e Araguapaz-GO. A árvore de espécies não apresentou distinção entre elas, o que corrobora a hipótese de diversificação recente. De modo geral, a análise comparada das espécies sugere introgressão ou polimorfismo ancestral, devido ao alto compartilhamento de haplótipos. Essas espécies possivelmente se encontram em processo de separação recente, sendo P. emarginatus a espécie em processo de especiaçãoSubmitted by Franciele Moreira (francielemoreyra@gmail.com) on 2020-01-13T21:25:24Z No. of bitstreams: 2 Tese - Stefany Lorrayny Lima - 2019.pdf: 9505480 bytes, checksum: dc93be685b285854ecafec54d65bff88 (MD5) license_rdf: 0 bytes, checksum: d41d8cd98f00b204e9800998ecf8427e (MD5)Approved for entry into archive by Luciana Ferreira (lucgeral@gmail.com) on 2020-01-14T11:50:49Z (GMT) No. of bitstreams: 2 Tese - Stefany Lorrayny Lima - 2019.pdf: 9505480 bytes, checksum: dc93be685b285854ecafec54d65bff88 (MD5) license_rdf: 0 bytes, checksum: d41d8cd98f00b204e9800998ecf8427e (MD5)Made available in DSpace on 2020-01-14T11:50:49Z (GMT). No. of bitstreams: 2 Tese - Stefany Lorrayny Lima - 2019.pdf: 9505480 bytes, checksum: dc93be685b285854ecafec54d65bff88 (MD5) license_rdf: 0 bytes, checksum: d41d8cd98f00b204e9800998ecf8427e (MD5) Previous issue date: 2019-12-06application/pdfporUniversidade Federal de GoiásPrograma de Pós-graduação em Genética e Melhoramento de Plantas (EA)UFGBrasilEscola de Agronomia - EA (RG)http://creativecommons.org/licenses/by-nc-nd/4.0/info:eu-repo/semantics/openAccessCerradoDiversificaçãonDNASucupira-brancacpDNADiversificationFITOTECNIA::MELHORAMENTO VEGETALFilogeografia de Pterodon emarginatus e Pterodon pubescens (Leguminosae)Comparative phylogeography of Pterodon emarginatus and Pterodon pubescens (Leguminosae)info:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/doctoralThesis-6265679607231828330600600600-60469537235023740702615607299470131967reponame:Repositório Institucional da UFGinstname:Universidade Federal de Goiás (UFG)instacron:UFGLICENSElicense.txtlicense.txttext/plain; charset=utf-82165http://repositorio.bc.ufg.br/tede/bitstreams/0b153d4a-73e3-45b4-b25e-a98c5bf525f3/downloadbd3efa91386c1718a7f26a329fdcb468MD51CC-LICENSElicense_urllicense_urltext/plain; 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dc.title.eng.fl_str_mv Filogeografia de Pterodon emarginatus e Pterodon pubescens (Leguminosae)
dc.title.alternative.eng.fl_str_mv Comparative phylogeography of Pterodon emarginatus and Pterodon pubescens (Leguminosae)
title Filogeografia de Pterodon emarginatus e Pterodon pubescens (Leguminosae)
spellingShingle Filogeografia de Pterodon emarginatus e Pterodon pubescens (Leguminosae)
Lima, Stefany Lorrayny
Cerrado
Diversificação
nDNA
Sucupira-branca
cpDNA
Diversification
FITOTECNIA::MELHORAMENTO VEGETAL
title_short Filogeografia de Pterodon emarginatus e Pterodon pubescens (Leguminosae)
title_full Filogeografia de Pterodon emarginatus e Pterodon pubescens (Leguminosae)
title_fullStr Filogeografia de Pterodon emarginatus e Pterodon pubescens (Leguminosae)
title_full_unstemmed Filogeografia de Pterodon emarginatus e Pterodon pubescens (Leguminosae)
title_sort Filogeografia de Pterodon emarginatus e Pterodon pubescens (Leguminosae)
author Lima, Stefany Lorrayny
author_facet Lima, Stefany Lorrayny
author_role author
dc.contributor.advisor1.fl_str_mv Soares, Thannya Nascimento
dc.contributor.advisor1Lattes.fl_str_mv http://lattes.cnpq.br/5590256762396056
dc.contributor.referee1.fl_str_mv Soares, Thannya Nascimento
dc.contributor.referee2.fl_str_mv Telles, Mariana Pires De Campos
dc.contributor.referee3.fl_str_mv Rocha, Dulce Maria Sucena da
dc.contributor.referee4.fl_str_mv Mansano, Vidal de Freitas
dc.contributor.referee5.fl_str_mv Jardim, Tatianne Piza Ferrari Abreu
dc.contributor.authorLattes.fl_str_mv http://lattes.cnpq.br/8123153874741152
dc.contributor.author.fl_str_mv Lima, Stefany Lorrayny
contributor_str_mv Soares, Thannya Nascimento
Soares, Thannya Nascimento
Telles, Mariana Pires De Campos
Rocha, Dulce Maria Sucena da
Mansano, Vidal de Freitas
Jardim, Tatianne Piza Ferrari Abreu
dc.subject.por.fl_str_mv Cerrado
Diversificação
nDNA
Sucupira-branca
cpDNA
topic Cerrado
Diversificação
nDNA
Sucupira-branca
cpDNA
Diversification
FITOTECNIA::MELHORAMENTO VEGETAL
dc.subject.eng.fl_str_mv Diversification
dc.subject.cnpq.fl_str_mv FITOTECNIA::MELHORAMENTO VEGETAL
description The species Pterodon emarginatus and P. pubescens, known as sucupira, occur in the Cerrado and have potential for medicinal and wood use. The comparative phylogeography of these species can help in understanding the historical pattern of distribution of genetic diversity, generating information for use and conservation. The objective of this work was to identify the phylogeographic structure of P. emarginatus and P. pubescens, and the comparative phylogeography of these species. The sample consisted of eleven populations for P. emarginatus and nineteen for P. pubescens, distributed in the states of Goiás, Tocantins, Bahia, Mato Grosso and Minas Gerais. The chloroplast regions sequenced were trnLE-trnLF and psbA-trnH, and the nuclear ribosomal was ITS101-102. In P. emarginatus, haplotypic and nucleotide diversity are high in chloroplast, as there is a high polymorphism in this region, with a high number of indels. The population structure is relatively low (FST = 0.10). In this species the populations Alvorada do Norte-GO, Cariri-TO, Luiz Eduardo Magalhães-BA and Monte Alegre de Goiás-GO stand out for genetic diversity and are located in an area of climate stability, influencing the evolutionary dynamics of the Cerrado. The dispersal has long distance potential (500 km). The demographic pattern has shown population growth for less than 150 a thousand years. In P. pubescens the haplotypic and nucleotide diversity are high in chloroplast and nucleus, with a high number of haplotypes. The population genetic structure is considerable (FST = 0.24), with a phylogeographic pattern marked by the divergence of populations of the Araguaia basin region, an area of influence on the Cerrado evolutionary dynamics, mainly Araguapaz-GO and Araguaiana-MT. Demographic history has shown population growth from 1.67 million years ago. Finally, P. emarginatus showed a higher diversity pattern in chloroplast, while in P. pubescens there was a high complexity of the phylogeographic pattern, and the population of Araguaiana-MT showed a high genetic distance. Despite the species separation, there is a highlight for populations that exhibit high haplotype sharing, mainly Araguaiana-MT and Araguapaz-GO. The species tree showed no distinction between species, corroborating the hypothesis of recent diversification. Comparative analysis of species suggests ancestral introgression or polymorphism, considering the high sharing of haplotypes. These species are possibly in the process of recent separation, and P. emarginatus is the species in the process of speciation.
publishDate 2019
dc.date.issued.fl_str_mv 2019-12-06
dc.date.accessioned.fl_str_mv 2020-01-14T11:50:49Z
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.driver.fl_str_mv info:eu-repo/semantics/doctoralThesis
format doctoralThesis
status_str publishedVersion
dc.identifier.citation.fl_str_mv LIMA, Stefany Lorrayny. Filogeografia de Pterodon emarginatus e Pterodon pubescens (Leguminosae). 2019. 119 f. Tese (Doutorado em Genética e Melhoramento de Plantas) - Universidade Federal de Goiás, Goiânia, 2019.
dc.identifier.uri.fl_str_mv http://repositorio.bc.ufg.br/tede/handle/tede/10296
dc.identifier.dark.fl_str_mv ark:/38995/0013000002nwd
identifier_str_mv LIMA, Stefany Lorrayny. Filogeografia de Pterodon emarginatus e Pterodon pubescens (Leguminosae). 2019. 119 f. Tese (Doutorado em Genética e Melhoramento de Plantas) - Universidade Federal de Goiás, Goiânia, 2019.
ark:/38995/0013000002nwd
url http://repositorio.bc.ufg.br/tede/handle/tede/10296
dc.language.iso.fl_str_mv por
language por
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600
600
dc.relation.department.fl_str_mv -6046953723502374070
dc.relation.cnpq.fl_str_mv 2615607299470131967
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eu_rights_str_mv openAccess
dc.format.none.fl_str_mv application/pdf
dc.publisher.none.fl_str_mv Universidade Federal de Goiás
dc.publisher.program.fl_str_mv Programa de Pós-graduação em Genética e Melhoramento de Plantas (EA)
dc.publisher.initials.fl_str_mv UFG
dc.publisher.country.fl_str_mv Brasil
dc.publisher.department.fl_str_mv Escola de Agronomia - EA (RG)
publisher.none.fl_str_mv Universidade Federal de Goiás
dc.source.none.fl_str_mv reponame:Repositório Institucional da UFG
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instname_str Universidade Federal de Goiás (UFG)
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institution UFG
reponame_str Repositório Institucional da UFG
collection Repositório Institucional da UFG
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http://repositorio.bc.ufg.br/tede/bitstreams/0466eb2d-8f9a-4c66-ad8e-b131623d257f/download
http://repositorio.bc.ufg.br/tede/bitstreams/3db5e649-1e5f-40c5-ab26-5e239cb162ff/download
http://repositorio.bc.ufg.br/tede/bitstreams/0b381c06-0acb-464e-a35c-a13b11a2ce22/download
bitstream.checksum.fl_str_mv bd3efa91386c1718a7f26a329fdcb468
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bitstream.checksumAlgorithm.fl_str_mv MD5
MD5
MD5
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repository.name.fl_str_mv Repositório Institucional da UFG - Universidade Federal de Goiás (UFG)
repository.mail.fl_str_mv tasesdissertacoes.bc@ufg.br
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