Genetic and symbiotic characterization of rhizobia nodulating legumes in a mining area in southeast Brazil

Detalhes bibliográficos
Autor(a) principal: Lopez, Bruna Daniela Ortiz
Data de Publicação: 2022
Outros Autores: Teixeira, Anita Fernanda dos Santos, Michel, Daniele Cabral, Guimarães, Amanda Azarias, Costa, Amanda Monique da, Costa, Juliana Santos, Pereira, Marcela de Souza, Duarte, Bárbara Luyse Marques, Moreira, Fatima Maria de Souza
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Institucional da UFLA
Texto Completo: http://repositorio.ufla.br/jspui/handle/1/50955
Resumo: Identification and selection of nitrogen-fixing bacterial strains for inoculation into native leguminous tree species can assist in the recovery of degraded areas. Additionally, native strains from these areas are genetic resources adapted to these conditions and are thus suitable for selection. The aim of this study was to symbiotically and genetically characterize 18 bacterial strains from the Rhizobium and Bradyrhizobium genera isolated from Machaerium nyctitans, Platypodium elegans, and Ormosia arborea grown in a nursery in an iron mining area. Three experiments were conducted under axenic conditions in a greenhouse. The nodulation capacity of the strains was evaluated by the number (NN) and dry matter (NDM) of nodules. Symbiotic efficiency was evaluated based on the following parameters: SPAD index (SPAD), shoot dry matter (SDM), root dry matter (RDM), and total dry matter (TDM) of the plants, relative efficiency (RE), shoot nitrogen content (SNC), and total nitrogen content in the plant (TNC). The atpD and gyrB housekeeping genes and the nifH gene were sequenced for phylogenetic analysis, and the nodC and nodD symbiotic genes of the strains were amplified. Out of the 18 strains, 16 were authenticated by nodulation capacity in the species of origin. The SPAD variable allowed for the detection of differences between treatments before the SDM. Additionally, the SPAD index showed correlation with TNC, and the strain Bradyrhizobium sp., UFLA01-839, which may represent a new species, was outstanding in Machaerium nyctitans. The nifH, nodD, and nodC genes were detected in UFLA01-839.
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spelling Genetic and symbiotic characterization of rhizobia nodulating legumes in a mining area in southeast BrazilHousekeeping genesSymbiotic genesAuthenticationSymbiotic efficiencyLeguminosas nodulantesGenes simbióticosEficiência simbióticaIdentification and selection of nitrogen-fixing bacterial strains for inoculation into native leguminous tree species can assist in the recovery of degraded areas. Additionally, native strains from these areas are genetic resources adapted to these conditions and are thus suitable for selection. The aim of this study was to symbiotically and genetically characterize 18 bacterial strains from the Rhizobium and Bradyrhizobium genera isolated from Machaerium nyctitans, Platypodium elegans, and Ormosia arborea grown in a nursery in an iron mining area. Three experiments were conducted under axenic conditions in a greenhouse. The nodulation capacity of the strains was evaluated by the number (NN) and dry matter (NDM) of nodules. Symbiotic efficiency was evaluated based on the following parameters: SPAD index (SPAD), shoot dry matter (SDM), root dry matter (RDM), and total dry matter (TDM) of the plants, relative efficiency (RE), shoot nitrogen content (SNC), and total nitrogen content in the plant (TNC). The atpD and gyrB housekeeping genes and the nifH gene were sequenced for phylogenetic analysis, and the nodC and nodD symbiotic genes of the strains were amplified. Out of the 18 strains, 16 were authenticated by nodulation capacity in the species of origin. The SPAD variable allowed for the detection of differences between treatments before the SDM. Additionally, the SPAD index showed correlation with TNC, and the strain Bradyrhizobium sp., UFLA01-839, which may represent a new species, was outstanding in Machaerium nyctitans. The nifH, nodD, and nodC genes were detected in UFLA01-839.Escola Superior de Agricultura "Luiz de Queiroz" - USP/ESALQ2022-08-12T22:03:23Z2022-08-12T22:03:23Z2022info:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articleapplication/pdfLOPEZ, B. D. O. et al. Genetic and symbiotic characterization of rhizobia nodulating legumes in a mining area in southeast Brazil. Scientia Agricola, Piracicaba, v. 79, n. 2, e20200238, 2022. DOI: http://doi.org/10.1590/1678-992X-2020-0238.http://repositorio.ufla.br/jspui/handle/1/50955Scientia Agricolareponame:Repositório Institucional da UFLAinstname:Universidade Federal de Lavras (UFLA)instacron:UFLAAttribution 4.0 Internationalhttp://creativecommons.org/licenses/by/4.0/info:eu-repo/semantics/openAccessLopez, Bruna Daniela OrtizTeixeira, Anita Fernanda dos SantosMichel, Daniele CabralGuimarães, Amanda AzariasCosta, Amanda Monique daCosta, Juliana SantosPereira, Marcela de SouzaDuarte, Bárbara Luyse MarquesMoreira, Fatima Maria de Souzaeng2022-08-12T22:03:46Zoai:localhost:1/50955Repositório InstitucionalPUBhttp://repositorio.ufla.br/oai/requestnivaldo@ufla.br || repositorio.biblioteca@ufla.bropendoar:2022-08-12T22:03:46Repositório Institucional da UFLA - Universidade Federal de Lavras (UFLA)false
dc.title.none.fl_str_mv Genetic and symbiotic characterization of rhizobia nodulating legumes in a mining area in southeast Brazil
title Genetic and symbiotic characterization of rhizobia nodulating legumes in a mining area in southeast Brazil
spellingShingle Genetic and symbiotic characterization of rhizobia nodulating legumes in a mining area in southeast Brazil
Lopez, Bruna Daniela Ortiz
Housekeeping genes
Symbiotic genes
Authentication
Symbiotic efficiency
Leguminosas nodulantes
Genes simbióticos
Eficiência simbiótica
title_short Genetic and symbiotic characterization of rhizobia nodulating legumes in a mining area in southeast Brazil
title_full Genetic and symbiotic characterization of rhizobia nodulating legumes in a mining area in southeast Brazil
title_fullStr Genetic and symbiotic characterization of rhizobia nodulating legumes in a mining area in southeast Brazil
title_full_unstemmed Genetic and symbiotic characterization of rhizobia nodulating legumes in a mining area in southeast Brazil
title_sort Genetic and symbiotic characterization of rhizobia nodulating legumes in a mining area in southeast Brazil
author Lopez, Bruna Daniela Ortiz
author_facet Lopez, Bruna Daniela Ortiz
Teixeira, Anita Fernanda dos Santos
Michel, Daniele Cabral
Guimarães, Amanda Azarias
Costa, Amanda Monique da
Costa, Juliana Santos
Pereira, Marcela de Souza
Duarte, Bárbara Luyse Marques
Moreira, Fatima Maria de Souza
author_role author
author2 Teixeira, Anita Fernanda dos Santos
Michel, Daniele Cabral
Guimarães, Amanda Azarias
Costa, Amanda Monique da
Costa, Juliana Santos
Pereira, Marcela de Souza
Duarte, Bárbara Luyse Marques
Moreira, Fatima Maria de Souza
author2_role author
author
author
author
author
author
author
author
dc.contributor.author.fl_str_mv Lopez, Bruna Daniela Ortiz
Teixeira, Anita Fernanda dos Santos
Michel, Daniele Cabral
Guimarães, Amanda Azarias
Costa, Amanda Monique da
Costa, Juliana Santos
Pereira, Marcela de Souza
Duarte, Bárbara Luyse Marques
Moreira, Fatima Maria de Souza
dc.subject.por.fl_str_mv Housekeeping genes
Symbiotic genes
Authentication
Symbiotic efficiency
Leguminosas nodulantes
Genes simbióticos
Eficiência simbiótica
topic Housekeeping genes
Symbiotic genes
Authentication
Symbiotic efficiency
Leguminosas nodulantes
Genes simbióticos
Eficiência simbiótica
description Identification and selection of nitrogen-fixing bacterial strains for inoculation into native leguminous tree species can assist in the recovery of degraded areas. Additionally, native strains from these areas are genetic resources adapted to these conditions and are thus suitable for selection. The aim of this study was to symbiotically and genetically characterize 18 bacterial strains from the Rhizobium and Bradyrhizobium genera isolated from Machaerium nyctitans, Platypodium elegans, and Ormosia arborea grown in a nursery in an iron mining area. Three experiments were conducted under axenic conditions in a greenhouse. The nodulation capacity of the strains was evaluated by the number (NN) and dry matter (NDM) of nodules. Symbiotic efficiency was evaluated based on the following parameters: SPAD index (SPAD), shoot dry matter (SDM), root dry matter (RDM), and total dry matter (TDM) of the plants, relative efficiency (RE), shoot nitrogen content (SNC), and total nitrogen content in the plant (TNC). The atpD and gyrB housekeeping genes and the nifH gene were sequenced for phylogenetic analysis, and the nodC and nodD symbiotic genes of the strains were amplified. Out of the 18 strains, 16 were authenticated by nodulation capacity in the species of origin. The SPAD variable allowed for the detection of differences between treatments before the SDM. Additionally, the SPAD index showed correlation with TNC, and the strain Bradyrhizobium sp., UFLA01-839, which may represent a new species, was outstanding in Machaerium nyctitans. The nifH, nodD, and nodC genes were detected in UFLA01-839.
publishDate 2022
dc.date.none.fl_str_mv 2022-08-12T22:03:23Z
2022-08-12T22:03:23Z
2022
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv LOPEZ, B. D. O. et al. Genetic and symbiotic characterization of rhizobia nodulating legumes in a mining area in southeast Brazil. Scientia Agricola, Piracicaba, v. 79, n. 2, e20200238, 2022. DOI: http://doi.org/10.1590/1678-992X-2020-0238.
http://repositorio.ufla.br/jspui/handle/1/50955
identifier_str_mv LOPEZ, B. D. O. et al. Genetic and symbiotic characterization of rhizobia nodulating legumes in a mining area in southeast Brazil. Scientia Agricola, Piracicaba, v. 79, n. 2, e20200238, 2022. DOI: http://doi.org/10.1590/1678-992X-2020-0238.
url http://repositorio.ufla.br/jspui/handle/1/50955
dc.language.iso.fl_str_mv eng
language eng
dc.rights.driver.fl_str_mv Attribution 4.0 International
http://creativecommons.org/licenses/by/4.0/
info:eu-repo/semantics/openAccess
rights_invalid_str_mv Attribution 4.0 International
http://creativecommons.org/licenses/by/4.0/
eu_rights_str_mv openAccess
dc.format.none.fl_str_mv application/pdf
dc.publisher.none.fl_str_mv Escola Superior de Agricultura "Luiz de Queiroz" - USP/ESALQ
publisher.none.fl_str_mv Escola Superior de Agricultura "Luiz de Queiroz" - USP/ESALQ
dc.source.none.fl_str_mv Scientia Agricola
reponame:Repositório Institucional da UFLA
instname:Universidade Federal de Lavras (UFLA)
instacron:UFLA
instname_str Universidade Federal de Lavras (UFLA)
instacron_str UFLA
institution UFLA
reponame_str Repositório Institucional da UFLA
collection Repositório Institucional da UFLA
repository.name.fl_str_mv Repositório Institucional da UFLA - Universidade Federal de Lavras (UFLA)
repository.mail.fl_str_mv nivaldo@ufla.br || repositorio.biblioteca@ufla.br
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