Genetic similarity among strawberry cultivars assessed by RAPD and ISSR markers

Detalhes bibliográficos
Autor(a) principal: Morales, Rafael Gustavo Ferreira
Data de Publicação: 2011
Outros Autores: Resende, Juliano Tadeu Vilela, Faria, Marcos Ventura, Andrade, Marcela Carvalho, Resende, Luciane Vilela, Delatorre, Carla Andrea, Silva, Paulo Roberto da
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Institucional da UFLA
Texto Completo: http://repositorio.ufla.br/jspui/handle/1/37579
Resumo: Most strawberry (Fragaria × ananassa Duchesne) cultivars used in Brazil are developed in other countries, it became clear the need to start the strawberry breeding program in the country. To start a breeding program is necessary the genetic characterization of the germplasm available. Molecular markers are important tools that can be used for this purpose. The objectives of the present study were to assess the genetic similarity among 11 strawberry cultivars using RAPD and ISSR molecular markers and to indicate the possible promising crosses. The DNA of the eleven strawberry cultivars was extracted and amplified by PCR with RAPD and ISSR primers. The DNA fragments were separated in agarose gel for the RAPD markers and in polyacrylamide gel for the ISSR markers. The genetic similarity matrix was estimated by the Jaccard coefficient. Based on this matrix, the cultivars were grouped using the UPGMA method. The dendogram generated by the RAPD markers distributed the cultivars in three groups while the ISSR markers generated two groups. There was no direct relationship between the marker groups when the two types of markers were compared. The grouping proposed by the ISSR markers was more coherent with the origin and the genealogy of the cultivars than that proposed by the RAPD markers, and it can be considered the most efficient method for the study of genetic divergence in strawberry. The most promising crosses, based on the genetic divergence estimated from the RAPD and ISSR molecular data were between the Tudla and Ventana and the Oso Grande and Ventana cultivars, respectively.
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spelling Genetic similarity among strawberry cultivars assessed by RAPD and ISSR markersFragaria × ananassaPlant breedingGenetic divergenceMolecular markersMost strawberry (Fragaria × ananassa Duchesne) cultivars used in Brazil are developed in other countries, it became clear the need to start the strawberry breeding program in the country. To start a breeding program is necessary the genetic characterization of the germplasm available. Molecular markers are important tools that can be used for this purpose. The objectives of the present study were to assess the genetic similarity among 11 strawberry cultivars using RAPD and ISSR molecular markers and to indicate the possible promising crosses. The DNA of the eleven strawberry cultivars was extracted and amplified by PCR with RAPD and ISSR primers. The DNA fragments were separated in agarose gel for the RAPD markers and in polyacrylamide gel for the ISSR markers. The genetic similarity matrix was estimated by the Jaccard coefficient. Based on this matrix, the cultivars were grouped using the UPGMA method. The dendogram generated by the RAPD markers distributed the cultivars in three groups while the ISSR markers generated two groups. There was no direct relationship between the marker groups when the two types of markers were compared. The grouping proposed by the ISSR markers was more coherent with the origin and the genealogy of the cultivars than that proposed by the RAPD markers, and it can be considered the most efficient method for the study of genetic divergence in strawberry. The most promising crosses, based on the genetic divergence estimated from the RAPD and ISSR molecular data were between the Tudla and Ventana and the Oso Grande and Ventana cultivars, respectively.Universidade de São Paulo (USP), Escola Superior de Agricultura "Luiz de Queiroz" (ESALQ)2019-11-08T12:39:52Z2019-11-08T12:39:52Z2011-12info:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articleapplication/pdfMORALES, R. G. F. et al. Genetic similarity among strawberry cultivars assessed by RAPD and ISSR markers. Scientia Agrícola, Piracicaba, v. 68, n. 6, p. 665-670, Nov./Dec. 2011. DOI: 10.1590/S0103-90162011000600010.http://repositorio.ufla.br/jspui/handle/1/37579Scientia Agrícolareponame:Repositório Institucional da UFLAinstname:Universidade Federal de Lavras (UFLA)instacron:UFLAAttribution-NonCommercial 4.0 Internationalhttp://creativecommons.org/licenses/by-nc/4.0/info:eu-repo/semantics/openAccessMorales, Rafael Gustavo FerreiraResende, Juliano Tadeu VilelaFaria, Marcos VenturaAndrade, Marcela CarvalhoResende, Luciane VilelaDelatorre, Carla AndreaSilva, Paulo Roberto daeng2023-05-26T18:50:17Zoai:localhost:1/37579Repositório InstitucionalPUBhttp://repositorio.ufla.br/oai/requestnivaldo@ufla.br || repositorio.biblioteca@ufla.bropendoar:2023-05-26T18:50:17Repositório Institucional da UFLA - Universidade Federal de Lavras (UFLA)false
dc.title.none.fl_str_mv Genetic similarity among strawberry cultivars assessed by RAPD and ISSR markers
title Genetic similarity among strawberry cultivars assessed by RAPD and ISSR markers
spellingShingle Genetic similarity among strawberry cultivars assessed by RAPD and ISSR markers
Morales, Rafael Gustavo Ferreira
Fragaria × ananassa
Plant breeding
Genetic divergence
Molecular markers
title_short Genetic similarity among strawberry cultivars assessed by RAPD and ISSR markers
title_full Genetic similarity among strawberry cultivars assessed by RAPD and ISSR markers
title_fullStr Genetic similarity among strawberry cultivars assessed by RAPD and ISSR markers
title_full_unstemmed Genetic similarity among strawberry cultivars assessed by RAPD and ISSR markers
title_sort Genetic similarity among strawberry cultivars assessed by RAPD and ISSR markers
author Morales, Rafael Gustavo Ferreira
author_facet Morales, Rafael Gustavo Ferreira
Resende, Juliano Tadeu Vilela
Faria, Marcos Ventura
Andrade, Marcela Carvalho
Resende, Luciane Vilela
Delatorre, Carla Andrea
Silva, Paulo Roberto da
author_role author
author2 Resende, Juliano Tadeu Vilela
Faria, Marcos Ventura
Andrade, Marcela Carvalho
Resende, Luciane Vilela
Delatorre, Carla Andrea
Silva, Paulo Roberto da
author2_role author
author
author
author
author
author
dc.contributor.author.fl_str_mv Morales, Rafael Gustavo Ferreira
Resende, Juliano Tadeu Vilela
Faria, Marcos Ventura
Andrade, Marcela Carvalho
Resende, Luciane Vilela
Delatorre, Carla Andrea
Silva, Paulo Roberto da
dc.subject.por.fl_str_mv Fragaria × ananassa
Plant breeding
Genetic divergence
Molecular markers
topic Fragaria × ananassa
Plant breeding
Genetic divergence
Molecular markers
description Most strawberry (Fragaria × ananassa Duchesne) cultivars used in Brazil are developed in other countries, it became clear the need to start the strawberry breeding program in the country. To start a breeding program is necessary the genetic characterization of the germplasm available. Molecular markers are important tools that can be used for this purpose. The objectives of the present study were to assess the genetic similarity among 11 strawberry cultivars using RAPD and ISSR molecular markers and to indicate the possible promising crosses. The DNA of the eleven strawberry cultivars was extracted and amplified by PCR with RAPD and ISSR primers. The DNA fragments were separated in agarose gel for the RAPD markers and in polyacrylamide gel for the ISSR markers. The genetic similarity matrix was estimated by the Jaccard coefficient. Based on this matrix, the cultivars were grouped using the UPGMA method. The dendogram generated by the RAPD markers distributed the cultivars in three groups while the ISSR markers generated two groups. There was no direct relationship between the marker groups when the two types of markers were compared. The grouping proposed by the ISSR markers was more coherent with the origin and the genealogy of the cultivars than that proposed by the RAPD markers, and it can be considered the most efficient method for the study of genetic divergence in strawberry. The most promising crosses, based on the genetic divergence estimated from the RAPD and ISSR molecular data were between the Tudla and Ventana and the Oso Grande and Ventana cultivars, respectively.
publishDate 2011
dc.date.none.fl_str_mv 2011-12
2019-11-08T12:39:52Z
2019-11-08T12:39:52Z
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv MORALES, R. G. F. et al. Genetic similarity among strawberry cultivars assessed by RAPD and ISSR markers. Scientia Agrícola, Piracicaba, v. 68, n. 6, p. 665-670, Nov./Dec. 2011. DOI: 10.1590/S0103-90162011000600010.
http://repositorio.ufla.br/jspui/handle/1/37579
identifier_str_mv MORALES, R. G. F. et al. Genetic similarity among strawberry cultivars assessed by RAPD and ISSR markers. Scientia Agrícola, Piracicaba, v. 68, n. 6, p. 665-670, Nov./Dec. 2011. DOI: 10.1590/S0103-90162011000600010.
url http://repositorio.ufla.br/jspui/handle/1/37579
dc.language.iso.fl_str_mv eng
language eng
dc.rights.driver.fl_str_mv Attribution-NonCommercial 4.0 International
http://creativecommons.org/licenses/by-nc/4.0/
info:eu-repo/semantics/openAccess
rights_invalid_str_mv Attribution-NonCommercial 4.0 International
http://creativecommons.org/licenses/by-nc/4.0/
eu_rights_str_mv openAccess
dc.format.none.fl_str_mv application/pdf
dc.publisher.none.fl_str_mv Universidade de São Paulo (USP), Escola Superior de Agricultura "Luiz de Queiroz" (ESALQ)
publisher.none.fl_str_mv Universidade de São Paulo (USP), Escola Superior de Agricultura "Luiz de Queiroz" (ESALQ)
dc.source.none.fl_str_mv Scientia Agrícola
reponame:Repositório Institucional da UFLA
instname:Universidade Federal de Lavras (UFLA)
instacron:UFLA
instname_str Universidade Federal de Lavras (UFLA)
instacron_str UFLA
institution UFLA
reponame_str Repositório Institucional da UFLA
collection Repositório Institucional da UFLA
repository.name.fl_str_mv Repositório Institucional da UFLA - Universidade Federal de Lavras (UFLA)
repository.mail.fl_str_mv nivaldo@ufla.br || repositorio.biblioteca@ufla.br
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