Geostatistical analysis of bacterial blight in coffee tree seedlings in the nursery

Detalhes bibliográficos
Autor(a) principal: Belan, Leônidas Leoni
Data de Publicação: 2018
Outros Autores: Pozza, Edson Ampélio, Alves, Marcelo de Carvalho, Freitas, Marcelo Loran de Oliveira
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Institucional da UFLA
Texto Completo: http://repositorio.ufla.br/jspui/handle/1/34536
Resumo: In nurseries of coffee tree seedlings (Coffea arabica), there are favorable conditions for bacterial blight epidemics (Pseudomonas syringae pv. garcae). Studying the spatial distribution of diseased plants can help in the adoption of management strategies. Likewise, geostatistics has been applied to shape the spatial distribution and study epidemiological aspects of plant diseases. Thus, this study was developed to characterize the spatial distribution pattern of bacterial blight in a nursery of coffee tree seedlings. The disease progress was monitored over time in 704 seedlings organized in lines and columns in a nursery. Considering the mean diameter of the pots used for producing seedlings, georeferencing was carried out in Cartesian coordinate system for the seedlings in the nursery. The disease incidence data were subjected to non-spatial exploratory analysis and geostatistical analysis. The spherical isotropic semivariogram model was adjusted to the data and data interpolation was performed by ordinary kriging to visualize the spatial distribution of symptomatic seedlings. Bacterial blight epidemic was detected in the nursery during the experimental period, and there was variability and spatial dependence in relation to the distribution of diseased seedlings. As the epidemic progressed, the population of diseased plants increased, as well as the number and the size of the foci and their coalescence. Besides, there was an increase in the range value, sill and nugget effect. The kriging maps showed the disease progress and its variance. The bacterial blight epidemic of coffee tree started with a random spatial distribution pattern, progressing to an aggregate pattern.
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spelling Geostatistical analysis of bacterial blight in coffee tree seedlings in the nurseryPseudomonas syringae pv. garcaeSpatial dependencePlant disease managementEpidemiologyDependencia espacialManejo de doenças de plantasEpidemiologiaIn nurseries of coffee tree seedlings (Coffea arabica), there are favorable conditions for bacterial blight epidemics (Pseudomonas syringae pv. garcae). Studying the spatial distribution of diseased plants can help in the adoption of management strategies. Likewise, geostatistics has been applied to shape the spatial distribution and study epidemiological aspects of plant diseases. Thus, this study was developed to characterize the spatial distribution pattern of bacterial blight in a nursery of coffee tree seedlings. The disease progress was monitored over time in 704 seedlings organized in lines and columns in a nursery. Considering the mean diameter of the pots used for producing seedlings, georeferencing was carried out in Cartesian coordinate system for the seedlings in the nursery. The disease incidence data were subjected to non-spatial exploratory analysis and geostatistical analysis. The spherical isotropic semivariogram model was adjusted to the data and data interpolation was performed by ordinary kriging to visualize the spatial distribution of symptomatic seedlings. Bacterial blight epidemic was detected in the nursery during the experimental period, and there was variability and spatial dependence in relation to the distribution of diseased seedlings. As the epidemic progressed, the population of diseased plants increased, as well as the number and the size of the foci and their coalescence. Besides, there was an increase in the range value, sill and nugget effect. The kriging maps showed the disease progress and its variance. The bacterial blight epidemic of coffee tree started with a random spatial distribution pattern, progressing to an aggregate pattern.Em viveiros de mudas de cafeeiro (Coffea arabica) ocorrem condições favoráveis para a ocorrência de epidemias da mancha aureolada (Pseudomonas syringae pv. garcae). Estudar a distribuição espacial de plantas doentes pode auxiliar na adoção de estratégias de manejo. Nesse sentido, a geoestatística tem sido aplicada para modelar a distribuição espacial e estudar aspectos epidemiológicos de doenças de plantas. Assim, este estudo foi desenvolvido para caracterizar o padrão de distribuição espacial da mancha aureolada em viveiro de mudas de cafeeiro. Para isso, o progresso da doença foi monitorido ao longo do tempo em 704 mudas organizadas em linhas e colunas em viveiro. Considerando o diâmetro médio dos recipientes utilizados para produção das mudas, foi realizado o georreferencimento das mudas no viveiro em sistema de coordenadas plano-cartesiano. Os dados de incidência da doença foram submetidos a uma análise exploratória não espacial e à análise geoestatística. O semivariograma isotrópico esférico foi ajustado aos dados e a interpolação dos dados foi realizada por krigagem ordinária para visualizar a distribuição espacial de mudas sintomáticas. Epidemia da doença foi detectada em viveiro durante o período experimental, havendo variabilidade e dependência espacial em relação à distribuição das mudas doentes. Com o decorrer da epidemia, houve aumento da população de plantas doença, número e tamanho dos focos e coalescência desses. Além disso, houve aumento do valor do alcance, patamar e do efeito pepita. Os mapas de krigagem mostraram o progresso da doença e sua variação. A epidemia da mancha aureolada do cafeeiro iniciou com padrão aleatório de distribuição espacial, progredindo para padrão agregado.Grupo Paulista de Fitopatologia2019-06-03T13:19:17Z2019-06-03T13:19:17Z2018info:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articleapplication/pdfBELAN, L. L. et al. Geostatistical analysis of bacterial blight in coffee tree seedlings in the nursery. Summa Phytopathologica, Botucatu, v. 44, n. 4, p. 317-325, 2018.http://repositorio.ufla.br/jspui/handle/1/34536Summa Phytopathologicareponame:Repositório Institucional da UFLAinstname:Universidade Federal de Lavras (UFLA)instacron:UFLAhttp://creativecommons.org/licenses/by/4.0/info:eu-repo/semantics/openAccessBelan, Leônidas LeoniPozza, Edson AmpélioAlves, Marcelo de CarvalhoFreitas, Marcelo Loran de Oliveiraeng2019-06-03T13:19:18Zoai:localhost:1/34536Repositório InstitucionalPUBhttp://repositorio.ufla.br/oai/requestnivaldo@ufla.br || repositorio.biblioteca@ufla.bropendoar:2019-06-03T13:19:18Repositório Institucional da UFLA - Universidade Federal de Lavras (UFLA)false
dc.title.none.fl_str_mv Geostatistical analysis of bacterial blight in coffee tree seedlings in the nursery
title Geostatistical analysis of bacterial blight in coffee tree seedlings in the nursery
spellingShingle Geostatistical analysis of bacterial blight in coffee tree seedlings in the nursery
Belan, Leônidas Leoni
Pseudomonas syringae pv. garcae
Spatial dependence
Plant disease management
Epidemiology
Dependencia espacial
Manejo de doenças de plantas
Epidemiologia
title_short Geostatistical analysis of bacterial blight in coffee tree seedlings in the nursery
title_full Geostatistical analysis of bacterial blight in coffee tree seedlings in the nursery
title_fullStr Geostatistical analysis of bacterial blight in coffee tree seedlings in the nursery
title_full_unstemmed Geostatistical analysis of bacterial blight in coffee tree seedlings in the nursery
title_sort Geostatistical analysis of bacterial blight in coffee tree seedlings in the nursery
author Belan, Leônidas Leoni
author_facet Belan, Leônidas Leoni
Pozza, Edson Ampélio
Alves, Marcelo de Carvalho
Freitas, Marcelo Loran de Oliveira
author_role author
author2 Pozza, Edson Ampélio
Alves, Marcelo de Carvalho
Freitas, Marcelo Loran de Oliveira
author2_role author
author
author
dc.contributor.author.fl_str_mv Belan, Leônidas Leoni
Pozza, Edson Ampélio
Alves, Marcelo de Carvalho
Freitas, Marcelo Loran de Oliveira
dc.subject.por.fl_str_mv Pseudomonas syringae pv. garcae
Spatial dependence
Plant disease management
Epidemiology
Dependencia espacial
Manejo de doenças de plantas
Epidemiologia
topic Pseudomonas syringae pv. garcae
Spatial dependence
Plant disease management
Epidemiology
Dependencia espacial
Manejo de doenças de plantas
Epidemiologia
description In nurseries of coffee tree seedlings (Coffea arabica), there are favorable conditions for bacterial blight epidemics (Pseudomonas syringae pv. garcae). Studying the spatial distribution of diseased plants can help in the adoption of management strategies. Likewise, geostatistics has been applied to shape the spatial distribution and study epidemiological aspects of plant diseases. Thus, this study was developed to characterize the spatial distribution pattern of bacterial blight in a nursery of coffee tree seedlings. The disease progress was monitored over time in 704 seedlings organized in lines and columns in a nursery. Considering the mean diameter of the pots used for producing seedlings, georeferencing was carried out in Cartesian coordinate system for the seedlings in the nursery. The disease incidence data were subjected to non-spatial exploratory analysis and geostatistical analysis. The spherical isotropic semivariogram model was adjusted to the data and data interpolation was performed by ordinary kriging to visualize the spatial distribution of symptomatic seedlings. Bacterial blight epidemic was detected in the nursery during the experimental period, and there was variability and spatial dependence in relation to the distribution of diseased seedlings. As the epidemic progressed, the population of diseased plants increased, as well as the number and the size of the foci and their coalescence. Besides, there was an increase in the range value, sill and nugget effect. The kriging maps showed the disease progress and its variance. The bacterial blight epidemic of coffee tree started with a random spatial distribution pattern, progressing to an aggregate pattern.
publishDate 2018
dc.date.none.fl_str_mv 2018
2019-06-03T13:19:17Z
2019-06-03T13:19:17Z
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv BELAN, L. L. et al. Geostatistical analysis of bacterial blight in coffee tree seedlings in the nursery. Summa Phytopathologica, Botucatu, v. 44, n. 4, p. 317-325, 2018.
http://repositorio.ufla.br/jspui/handle/1/34536
identifier_str_mv BELAN, L. L. et al. Geostatistical analysis of bacterial blight in coffee tree seedlings in the nursery. Summa Phytopathologica, Botucatu, v. 44, n. 4, p. 317-325, 2018.
url http://repositorio.ufla.br/jspui/handle/1/34536
dc.language.iso.fl_str_mv eng
language eng
dc.rights.driver.fl_str_mv http://creativecommons.org/licenses/by/4.0/
info:eu-repo/semantics/openAccess
rights_invalid_str_mv http://creativecommons.org/licenses/by/4.0/
eu_rights_str_mv openAccess
dc.format.none.fl_str_mv application/pdf
dc.publisher.none.fl_str_mv Grupo Paulista de Fitopatologia
publisher.none.fl_str_mv Grupo Paulista de Fitopatologia
dc.source.none.fl_str_mv Summa Phytopathologica
reponame:Repositório Institucional da UFLA
instname:Universidade Federal de Lavras (UFLA)
instacron:UFLA
instname_str Universidade Federal de Lavras (UFLA)
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institution UFLA
reponame_str Repositório Institucional da UFLA
collection Repositório Institucional da UFLA
repository.name.fl_str_mv Repositório Institucional da UFLA - Universidade Federal de Lavras (UFLA)
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