Conventional PCR for detection of Corynespora cassiicola in soybean seeds
Autor(a) principal: | |
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Data de Publicação: | 2016 |
Outros Autores: | , |
Tipo de documento: | Artigo |
Idioma: | eng |
Título da fonte: | Repositório Institucional da UFLA |
Texto Completo: | http://repositorio.ufla.br/jspui/handle/1/31631 |
Resumo: | The fungus Corynespora cassiicola, causal agent of target spot in soybeans, can be transmitted by soybean seeds and as of that point cause severe damage. This disease may be diagnosed at an early stage by seed testing, but knowledge in this area is insufficient. Because of that and increased attack by the disease in soybean areas in Brazil, further studies are required. The aim of this study was to evaluate the use of conventional PCR in detecting C. cassiicola in soybean seeds. The GA4-F/GA4-R primers described in the literature were tested for their specificity and sensitivity for detection of C. cassiicola in pure culture and in soybean seeds. Uninoculated and inoculated seed samples were used with different incidence levels - 100%, 10%, 1%, 0.5%, 0.25%, and 0% of preestablished inoculum potentials, P0, P1, P2, and P3. Detection of C. cassiicola in P1 inoculum potential was observed in samples with incidence levels of 10% to 100%. In the P3 potential, detection of the pathogen was successful in samples at the low level of 0.25%. |
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Conventional PCR for detection of Corynespora cassiicola in soybean seedsUso de PCR convencional para a detecção de Corynespora cassiicola em sementes de sojaSeed pathologyTarget spotElectrophoresisPatologia de sementesMancha alvoEletroforeseThe fungus Corynespora cassiicola, causal agent of target spot in soybeans, can be transmitted by soybean seeds and as of that point cause severe damage. This disease may be diagnosed at an early stage by seed testing, but knowledge in this area is insufficient. Because of that and increased attack by the disease in soybean areas in Brazil, further studies are required. The aim of this study was to evaluate the use of conventional PCR in detecting C. cassiicola in soybean seeds. The GA4-F/GA4-R primers described in the literature were tested for their specificity and sensitivity for detection of C. cassiicola in pure culture and in soybean seeds. Uninoculated and inoculated seed samples were used with different incidence levels - 100%, 10%, 1%, 0.5%, 0.25%, and 0% of preestablished inoculum potentials, P0, P1, P2, and P3. Detection of C. cassiicola in P1 inoculum potential was observed in samples with incidence levels of 10% to 100%. In the P3 potential, detection of the pathogen was successful in samples at the low level of 0.25%.O fungo Corynespora cassiicola, agente causal da mancha alvo em soja, pode ser transmitido por sementes de soja e a partir daí causar danos severos. A diagnose precoce desta doença pode ser realizada por meio de testes de sementes, cujo conhecimento é insuficiente. Por esta razão e pelo aumento da área de soja atacada pela referida doença no Brasil, estudos mais aprofundados são necessários. Neste trabalho, o objetivo foi avaliar o uso da técnica PCR convencional na detecção de C. cassiicola em amostras de sementes de soja. Os primers GA4-F/GA4-R, relatados na literatura, foram testados para verificar a sua especificidade e sensibilidade para detecção de C. cassiicola em cultura pura e em sementes de soja. Foram utilizadas amostras de sementes, inoculadas e não inoculadas, com diferentes níveis de incidência, de 100%, 10%, 1%, 0,5%, 0,25% e 0%, por potenciais de inóculo preestabelecidos, P0, P1, P2 e P3. A detecção de C. cassiicola no potencial de inóculo P1, foi observada em amostras com níveis de incidência de 10% a 100%. No potencial P3, a detecção do patógeno foi bem-sucedida em amostras com nível mínimo de 0,25%.Associação Brasileira de Tecnologia de Sementes2018-11-05T18:06:42Z2018-11-05T18:06:42Z2016-04info:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articleapplication/pdfSOUSA, M. V. de; SIQUEIRA, C. da S.; MACHADO, J. da C. Conventional PCR for detection of Corynespora cassiicola in soybean seeds. Journal of Seed Science, Londrina, v. 38, n. 2, p. 85-91, Apr./June 2016.http://repositorio.ufla.br/jspui/handle/1/31631Journal of Seed Sciencereponame:Repositório Institucional da UFLAinstname:Universidade Federal de Lavras (UFLA)instacron:UFLAhttp://creativecommons.org/licenses/by/4.0/info:eu-repo/semantics/openAccessSousa, Marcella Viana deSiqueira, Carolina da SilvaMachado, José da Cruzeng2023-05-26T19:51:26Zoai:localhost:1/31631Repositório InstitucionalPUBhttp://repositorio.ufla.br/oai/requestnivaldo@ufla.br || repositorio.biblioteca@ufla.bropendoar:2023-05-26T19:51:26Repositório Institucional da UFLA - Universidade Federal de Lavras (UFLA)false |
dc.title.none.fl_str_mv |
Conventional PCR for detection of Corynespora cassiicola in soybean seeds Uso de PCR convencional para a detecção de Corynespora cassiicola em sementes de soja |
title |
Conventional PCR for detection of Corynespora cassiicola in soybean seeds |
spellingShingle |
Conventional PCR for detection of Corynespora cassiicola in soybean seeds Sousa, Marcella Viana de Seed pathology Target spot Electrophoresis Patologia de sementes Mancha alvo Eletroforese |
title_short |
Conventional PCR for detection of Corynespora cassiicola in soybean seeds |
title_full |
Conventional PCR for detection of Corynespora cassiicola in soybean seeds |
title_fullStr |
Conventional PCR for detection of Corynespora cassiicola in soybean seeds |
title_full_unstemmed |
Conventional PCR for detection of Corynespora cassiicola in soybean seeds |
title_sort |
Conventional PCR for detection of Corynespora cassiicola in soybean seeds |
author |
Sousa, Marcella Viana de |
author_facet |
Sousa, Marcella Viana de Siqueira, Carolina da Silva Machado, José da Cruz |
author_role |
author |
author2 |
Siqueira, Carolina da Silva Machado, José da Cruz |
author2_role |
author author |
dc.contributor.author.fl_str_mv |
Sousa, Marcella Viana de Siqueira, Carolina da Silva Machado, José da Cruz |
dc.subject.por.fl_str_mv |
Seed pathology Target spot Electrophoresis Patologia de sementes Mancha alvo Eletroforese |
topic |
Seed pathology Target spot Electrophoresis Patologia de sementes Mancha alvo Eletroforese |
description |
The fungus Corynespora cassiicola, causal agent of target spot in soybeans, can be transmitted by soybean seeds and as of that point cause severe damage. This disease may be diagnosed at an early stage by seed testing, but knowledge in this area is insufficient. Because of that and increased attack by the disease in soybean areas in Brazil, further studies are required. The aim of this study was to evaluate the use of conventional PCR in detecting C. cassiicola in soybean seeds. The GA4-F/GA4-R primers described in the literature were tested for their specificity and sensitivity for detection of C. cassiicola in pure culture and in soybean seeds. Uninoculated and inoculated seed samples were used with different incidence levels - 100%, 10%, 1%, 0.5%, 0.25%, and 0% of preestablished inoculum potentials, P0, P1, P2, and P3. Detection of C. cassiicola in P1 inoculum potential was observed in samples with incidence levels of 10% to 100%. In the P3 potential, detection of the pathogen was successful in samples at the low level of 0.25%. |
publishDate |
2016 |
dc.date.none.fl_str_mv |
2016-04 2018-11-05T18:06:42Z 2018-11-05T18:06:42Z |
dc.type.status.fl_str_mv |
info:eu-repo/semantics/publishedVersion |
dc.type.driver.fl_str_mv |
info:eu-repo/semantics/article |
format |
article |
status_str |
publishedVersion |
dc.identifier.uri.fl_str_mv |
SOUSA, M. V. de; SIQUEIRA, C. da S.; MACHADO, J. da C. Conventional PCR for detection of Corynespora cassiicola in soybean seeds. Journal of Seed Science, Londrina, v. 38, n. 2, p. 85-91, Apr./June 2016. http://repositorio.ufla.br/jspui/handle/1/31631 |
identifier_str_mv |
SOUSA, M. V. de; SIQUEIRA, C. da S.; MACHADO, J. da C. Conventional PCR for detection of Corynespora cassiicola in soybean seeds. Journal of Seed Science, Londrina, v. 38, n. 2, p. 85-91, Apr./June 2016. |
url |
http://repositorio.ufla.br/jspui/handle/1/31631 |
dc.language.iso.fl_str_mv |
eng |
language |
eng |
dc.rights.driver.fl_str_mv |
http://creativecommons.org/licenses/by/4.0/ info:eu-repo/semantics/openAccess |
rights_invalid_str_mv |
http://creativecommons.org/licenses/by/4.0/ |
eu_rights_str_mv |
openAccess |
dc.format.none.fl_str_mv |
application/pdf |
dc.publisher.none.fl_str_mv |
Associação Brasileira de Tecnologia de Sementes |
publisher.none.fl_str_mv |
Associação Brasileira de Tecnologia de Sementes |
dc.source.none.fl_str_mv |
Journal of Seed Science reponame:Repositório Institucional da UFLA instname:Universidade Federal de Lavras (UFLA) instacron:UFLA |
instname_str |
Universidade Federal de Lavras (UFLA) |
instacron_str |
UFLA |
institution |
UFLA |
reponame_str |
Repositório Institucional da UFLA |
collection |
Repositório Institucional da UFLA |
repository.name.fl_str_mv |
Repositório Institucional da UFLA - Universidade Federal de Lavras (UFLA) |
repository.mail.fl_str_mv |
nivaldo@ufla.br || repositorio.biblioteca@ufla.br |
_version_ |
1807835139672113152 |