Conventional PCR for detection of Corynespora cassiicola in soybean seeds

Detalhes bibliográficos
Autor(a) principal: Sousa, Marcella Viana de
Data de Publicação: 2016
Outros Autores: Siqueira, Carolina da Silva, Machado, José da Cruz
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Institucional da UFLA
Texto Completo: http://repositorio.ufla.br/jspui/handle/1/31631
Resumo: The fungus Corynespora cassiicola, causal agent of target spot in soybeans, can be transmitted by soybean seeds and as of that point cause severe damage. This disease may be diagnosed at an early stage by seed testing, but knowledge in this area is insufficient. Because of that and increased attack by the disease in soybean areas in Brazil, further studies are required. The aim of this study was to evaluate the use of conventional PCR in detecting C. cassiicola in soybean seeds. The GA4-F/GA4-R primers described in the literature were tested for their specificity and sensitivity for detection of C. cassiicola in pure culture and in soybean seeds. Uninoculated and inoculated seed samples were used with different incidence levels - 100%, 10%, 1%, 0.5%, 0.25%, and 0% of preestablished inoculum potentials, P0, P1, P2, and P3. Detection of C. cassiicola in P1 inoculum potential was observed in samples with incidence levels of 10% to 100%. In the P3 potential, detection of the pathogen was successful in samples at the low level of 0.25%.
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spelling Conventional PCR for detection of Corynespora cassiicola in soybean seedsUso de PCR convencional para a detecção de Corynespora cassiicola em sementes de sojaSeed pathologyTarget spotElectrophoresisPatologia de sementesMancha alvoEletroforeseThe fungus Corynespora cassiicola, causal agent of target spot in soybeans, can be transmitted by soybean seeds and as of that point cause severe damage. This disease may be diagnosed at an early stage by seed testing, but knowledge in this area is insufficient. Because of that and increased attack by the disease in soybean areas in Brazil, further studies are required. The aim of this study was to evaluate the use of conventional PCR in detecting C. cassiicola in soybean seeds. The GA4-F/GA4-R primers described in the literature were tested for their specificity and sensitivity for detection of C. cassiicola in pure culture and in soybean seeds. Uninoculated and inoculated seed samples were used with different incidence levels - 100%, 10%, 1%, 0.5%, 0.25%, and 0% of preestablished inoculum potentials, P0, P1, P2, and P3. Detection of C. cassiicola in P1 inoculum potential was observed in samples with incidence levels of 10% to 100%. In the P3 potential, detection of the pathogen was successful in samples at the low level of 0.25%.O fungo Corynespora cassiicola, agente causal da mancha alvo em soja, pode ser transmitido por sementes de soja e a partir daí causar danos severos. A diagnose precoce desta doença pode ser realizada por meio de testes de sementes, cujo conhecimento é insuficiente. Por esta razão e pelo aumento da área de soja atacada pela referida doença no Brasil, estudos mais aprofundados são necessários. Neste trabalho, o objetivo foi avaliar o uso da técnica PCR convencional na detecção de C. cassiicola em amostras de sementes de soja. Os primers GA4-F/GA4-R, relatados na literatura, foram testados para verificar a sua especificidade e sensibilidade para detecção de C. cassiicola em cultura pura e em sementes de soja. Foram utilizadas amostras de sementes, inoculadas e não inoculadas, com diferentes níveis de incidência, de 100%, 10%, 1%, 0,5%, 0,25% e 0%, por potenciais de inóculo preestabelecidos, P0, P1, P2 e P3. A detecção de C. cassiicola no potencial de inóculo P1, foi observada em amostras com níveis de incidência de 10% a 100%. No potencial P3, a detecção do patógeno foi bem-sucedida em amostras com nível mínimo de 0,25%.Associação Brasileira de Tecnologia de Sementes2018-11-05T18:06:42Z2018-11-05T18:06:42Z2016-04info:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articleapplication/pdfSOUSA, M. V. de; SIQUEIRA, C. da S.; MACHADO, J. da C. Conventional PCR for detection of Corynespora cassiicola in soybean seeds. Journal of Seed Science, Londrina, v. 38, n. 2, p. 85-91, Apr./June 2016.http://repositorio.ufla.br/jspui/handle/1/31631Journal of Seed Sciencereponame:Repositório Institucional da UFLAinstname:Universidade Federal de Lavras (UFLA)instacron:UFLAhttp://creativecommons.org/licenses/by/4.0/info:eu-repo/semantics/openAccessSousa, Marcella Viana deSiqueira, Carolina da SilvaMachado, José da Cruzeng2023-05-26T19:51:26Zoai:localhost:1/31631Repositório InstitucionalPUBhttp://repositorio.ufla.br/oai/requestnivaldo@ufla.br || repositorio.biblioteca@ufla.bropendoar:2023-05-26T19:51:26Repositório Institucional da UFLA - Universidade Federal de Lavras (UFLA)false
dc.title.none.fl_str_mv Conventional PCR for detection of Corynespora cassiicola in soybean seeds
Uso de PCR convencional para a detecção de Corynespora cassiicola em sementes de soja
title Conventional PCR for detection of Corynespora cassiicola in soybean seeds
spellingShingle Conventional PCR for detection of Corynespora cassiicola in soybean seeds
Sousa, Marcella Viana de
Seed pathology
Target spot
Electrophoresis
Patologia de sementes
Mancha alvo
Eletroforese
title_short Conventional PCR for detection of Corynespora cassiicola in soybean seeds
title_full Conventional PCR for detection of Corynespora cassiicola in soybean seeds
title_fullStr Conventional PCR for detection of Corynespora cassiicola in soybean seeds
title_full_unstemmed Conventional PCR for detection of Corynespora cassiicola in soybean seeds
title_sort Conventional PCR for detection of Corynespora cassiicola in soybean seeds
author Sousa, Marcella Viana de
author_facet Sousa, Marcella Viana de
Siqueira, Carolina da Silva
Machado, José da Cruz
author_role author
author2 Siqueira, Carolina da Silva
Machado, José da Cruz
author2_role author
author
dc.contributor.author.fl_str_mv Sousa, Marcella Viana de
Siqueira, Carolina da Silva
Machado, José da Cruz
dc.subject.por.fl_str_mv Seed pathology
Target spot
Electrophoresis
Patologia de sementes
Mancha alvo
Eletroforese
topic Seed pathology
Target spot
Electrophoresis
Patologia de sementes
Mancha alvo
Eletroforese
description The fungus Corynespora cassiicola, causal agent of target spot in soybeans, can be transmitted by soybean seeds and as of that point cause severe damage. This disease may be diagnosed at an early stage by seed testing, but knowledge in this area is insufficient. Because of that and increased attack by the disease in soybean areas in Brazil, further studies are required. The aim of this study was to evaluate the use of conventional PCR in detecting C. cassiicola in soybean seeds. The GA4-F/GA4-R primers described in the literature were tested for their specificity and sensitivity for detection of C. cassiicola in pure culture and in soybean seeds. Uninoculated and inoculated seed samples were used with different incidence levels - 100%, 10%, 1%, 0.5%, 0.25%, and 0% of preestablished inoculum potentials, P0, P1, P2, and P3. Detection of C. cassiicola in P1 inoculum potential was observed in samples with incidence levels of 10% to 100%. In the P3 potential, detection of the pathogen was successful in samples at the low level of 0.25%.
publishDate 2016
dc.date.none.fl_str_mv 2016-04
2018-11-05T18:06:42Z
2018-11-05T18:06:42Z
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv SOUSA, M. V. de; SIQUEIRA, C. da S.; MACHADO, J. da C. Conventional PCR for detection of Corynespora cassiicola in soybean seeds. Journal of Seed Science, Londrina, v. 38, n. 2, p. 85-91, Apr./June 2016.
http://repositorio.ufla.br/jspui/handle/1/31631
identifier_str_mv SOUSA, M. V. de; SIQUEIRA, C. da S.; MACHADO, J. da C. Conventional PCR for detection of Corynespora cassiicola in soybean seeds. Journal of Seed Science, Londrina, v. 38, n. 2, p. 85-91, Apr./June 2016.
url http://repositorio.ufla.br/jspui/handle/1/31631
dc.language.iso.fl_str_mv eng
language eng
dc.rights.driver.fl_str_mv http://creativecommons.org/licenses/by/4.0/
info:eu-repo/semantics/openAccess
rights_invalid_str_mv http://creativecommons.org/licenses/by/4.0/
eu_rights_str_mv openAccess
dc.format.none.fl_str_mv application/pdf
dc.publisher.none.fl_str_mv Associação Brasileira de Tecnologia de Sementes
publisher.none.fl_str_mv Associação Brasileira de Tecnologia de Sementes
dc.source.none.fl_str_mv Journal of Seed Science
reponame:Repositório Institucional da UFLA
instname:Universidade Federal de Lavras (UFLA)
instacron:UFLA
instname_str Universidade Federal de Lavras (UFLA)
instacron_str UFLA
institution UFLA
reponame_str Repositório Institucional da UFLA
collection Repositório Institucional da UFLA
repository.name.fl_str_mv Repositório Institucional da UFLA - Universidade Federal de Lavras (UFLA)
repository.mail.fl_str_mv nivaldo@ufla.br || repositorio.biblioteca@ufla.br
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