Genetic diversity of American wild rice species

Detalhes bibliográficos
Autor(a) principal: VEASEY, Elizabeth Ann
Data de Publicação: 2011
Outros Autores: BRESSAN, Eduardo de Andrade, ZUCCHI, Maria Imaculada, VENCOVSKY, Roland, CARDIM, Daruska Cavalcante, SILVA, Rainério Meireles da
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Institucional da UFPA
Texto Completo: http://repositorio.ufpa.br/jspui/handle/2011/10365
http://dx.doi.org/10.1590/S0103-90162011000400008
Resumo: Studies on genetic diversity and genetic structure of natural populations are important in order to define strategies for in situ and ex situ conservation actions and for plant pre-breeding programs. Aiming to assess the genetic diversity and genetic structure of three wild American Oryza species with isozyme markers, 14 populations of the diploid O. glumaepatula (AglAgl), 11 populations of the tetraploid O. grandiglumis (CCDD) and five populations of the also tetraploid O. latifolia (CCDD) were studied. They were all originated from Rio Paraguay hydrographic basin and the Amazon. Four enzymes were used and they gave 40 polymorphic bands. The most polymorphic species was O. glumaepatula, followed by O. latifolia and O. grandiglumis. A cluster analysis with the Jaccard similarity coefficient separated the diploid from the two tetraploid species, and also the two tetraploid species. This separation was also evident on a scatter plot from a principal component analysis, suggesting that they should be treated as two separate species, although further studies are necessary to provide support for this affirmative. The AMOVA analyses showed a high intrapopulational variability for O. latifolia (67.6%) and O. grandiglumis (52.2%), when compared to their interpopulational variability (32.4% and 47.8%, respectively), which suggests the hypothesis of a higher degree of outcrossing events within these species. When studying the correlation between the Jaccard dissimilarity coefficient and geographic distances, a spatial genetic structure was observed for O. glumaepatula only. These results are important for defining strategies of both in situ and ex situ conservation.
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spelling 2018-11-05T17:31:48Z2018-11-05T17:31:48Z2011-08VEASEY, Elizabeth Ann et al. Genetic diversity of American wild rice species. Scientia Agricola, Piracicaba, SP, v. 68, n. 4, p. 440-446, jul./ago. 2011. Disponível em: <http://repositorio.ufpa.br/jspui/handle/2011/10365>. Acesso em:.1678-992Xhttp://repositorio.ufpa.br/jspui/handle/2011/10365http://dx.doi.org/10.1590/S0103-90162011000400008Studies on genetic diversity and genetic structure of natural populations are important in order to define strategies for in situ and ex situ conservation actions and for plant pre-breeding programs. Aiming to assess the genetic diversity and genetic structure of three wild American Oryza species with isozyme markers, 14 populations of the diploid O. glumaepatula (AglAgl), 11 populations of the tetraploid O. grandiglumis (CCDD) and five populations of the also tetraploid O. latifolia (CCDD) were studied. They were all originated from Rio Paraguay hydrographic basin and the Amazon. Four enzymes were used and they gave 40 polymorphic bands. The most polymorphic species was O. glumaepatula, followed by O. latifolia and O. grandiglumis. A cluster analysis with the Jaccard similarity coefficient separated the diploid from the two tetraploid species, and also the two tetraploid species. This separation was also evident on a scatter plot from a principal component analysis, suggesting that they should be treated as two separate species, although further studies are necessary to provide support for this affirmative. The AMOVA analyses showed a high intrapopulational variability for O. latifolia (67.6%) and O. grandiglumis (52.2%), when compared to their interpopulational variability (32.4% and 47.8%, respectively), which suggests the hypothesis of a higher degree of outcrossing events within these species. When studying the correlation between the Jaccard dissimilarity coefficient and geographic distances, a spatial genetic structure was observed for O. glumaepatula only. These results are important for defining strategies of both in situ and ex situ conservation.SILVA, R. M. 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dc.title.pt_BR.fl_str_mv Genetic diversity of American wild rice species
title Genetic diversity of American wild rice species
spellingShingle Genetic diversity of American wild rice species
VEASEY, Elizabeth Ann
CNPQ::CIENCIAS AGRARIAS::RECURSOS FLORESTAIS E ENGENHARIA FLORESTAL::SILVICULTURA::GENETICA E MELHORAMENTO FLORESTAL
Genética vegetal
Arroz selvagem
Oryza glumaepatula
Oryza latifolia
Oryza grandiglumis
title_short Genetic diversity of American wild rice species
title_full Genetic diversity of American wild rice species
title_fullStr Genetic diversity of American wild rice species
title_full_unstemmed Genetic diversity of American wild rice species
title_sort Genetic diversity of American wild rice species
author VEASEY, Elizabeth Ann
author_facet VEASEY, Elizabeth Ann
BRESSAN, Eduardo de Andrade
ZUCCHI, Maria Imaculada
VENCOVSKY, Roland
CARDIM, Daruska Cavalcante
SILVA, Rainério Meireles da
author_role author
author2 BRESSAN, Eduardo de Andrade
ZUCCHI, Maria Imaculada
VENCOVSKY, Roland
CARDIM, Daruska Cavalcante
SILVA, Rainério Meireles da
author2_role author
author
author
author
author
dc.contributor.authorLattes.fl_str_mv http://lattes.cnpq.br/8454553859685834
http://lattes.cnpq.br/4932817846629535
http://lattes.cnpq.br/2083064025342283
http://lattes.cnpq.br/2217556709443591
http://lattes.cnpq.br/9573209586508106
http://lattes.cnpq.br/2570627659935507
dc.contributor.author.fl_str_mv VEASEY, Elizabeth Ann
BRESSAN, Eduardo de Andrade
ZUCCHI, Maria Imaculada
VENCOVSKY, Roland
CARDIM, Daruska Cavalcante
SILVA, Rainério Meireles da
dc.subject.cnpq.fl_str_mv CNPQ::CIENCIAS AGRARIAS::RECURSOS FLORESTAIS E ENGENHARIA FLORESTAL::SILVICULTURA::GENETICA E MELHORAMENTO FLORESTAL
topic CNPQ::CIENCIAS AGRARIAS::RECURSOS FLORESTAIS E ENGENHARIA FLORESTAL::SILVICULTURA::GENETICA E MELHORAMENTO FLORESTAL
Genética vegetal
Arroz selvagem
Oryza glumaepatula
Oryza latifolia
Oryza grandiglumis
dc.subject.por.fl_str_mv Genética vegetal
Arroz selvagem
Oryza glumaepatula
Oryza latifolia
Oryza grandiglumis
description Studies on genetic diversity and genetic structure of natural populations are important in order to define strategies for in situ and ex situ conservation actions and for plant pre-breeding programs. Aiming to assess the genetic diversity and genetic structure of three wild American Oryza species with isozyme markers, 14 populations of the diploid O. glumaepatula (AglAgl), 11 populations of the tetraploid O. grandiglumis (CCDD) and five populations of the also tetraploid O. latifolia (CCDD) were studied. They were all originated from Rio Paraguay hydrographic basin and the Amazon. Four enzymes were used and they gave 40 polymorphic bands. The most polymorphic species was O. glumaepatula, followed by O. latifolia and O. grandiglumis. A cluster analysis with the Jaccard similarity coefficient separated the diploid from the two tetraploid species, and also the two tetraploid species. This separation was also evident on a scatter plot from a principal component analysis, suggesting that they should be treated as two separate species, although further studies are necessary to provide support for this affirmative. The AMOVA analyses showed a high intrapopulational variability for O. latifolia (67.6%) and O. grandiglumis (52.2%), when compared to their interpopulational variability (32.4% and 47.8%, respectively), which suggests the hypothesis of a higher degree of outcrossing events within these species. When studying the correlation between the Jaccard dissimilarity coefficient and geographic distances, a spatial genetic structure was observed for O. glumaepatula only. These results are important for defining strategies of both in situ and ex situ conservation.
publishDate 2011
dc.date.issued.fl_str_mv 2011-08
dc.date.accessioned.fl_str_mv 2018-11-05T17:31:48Z
dc.date.available.fl_str_mv 2018-11-05T17:31:48Z
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dc.identifier.citation.fl_str_mv VEASEY, Elizabeth Ann et al. Genetic diversity of American wild rice species. Scientia Agricola, Piracicaba, SP, v. 68, n. 4, p. 440-446, jul./ago. 2011. Disponível em: <http://repositorio.ufpa.br/jspui/handle/2011/10365>. Acesso em:.
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dc.identifier.issn.pt_BR.fl_str_mv 1678-992X
dc.identifier.doi.pt_BR.fl_str_mv http://dx.doi.org/10.1590/S0103-90162011000400008
identifier_str_mv VEASEY, Elizabeth Ann et al. Genetic diversity of American wild rice species. Scientia Agricola, Piracicaba, SP, v. 68, n. 4, p. 440-446, jul./ago. 2011. Disponível em: <http://repositorio.ufpa.br/jspui/handle/2011/10365>. Acesso em:.
1678-992X
url http://repositorio.ufpa.br/jspui/handle/2011/10365
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