Genetic diversity of American wild rice species
Autor(a) principal: | |
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Data de Publicação: | 2011 |
Outros Autores: | , , , , |
Tipo de documento: | Artigo |
Idioma: | eng |
Título da fonte: | Repositório Institucional da UFPA |
Texto Completo: | http://repositorio.ufpa.br/jspui/handle/2011/10365 http://dx.doi.org/10.1590/S0103-90162011000400008 |
Resumo: | Studies on genetic diversity and genetic structure of natural populations are important in order to define strategies for in situ and ex situ conservation actions and for plant pre-breeding programs. Aiming to assess the genetic diversity and genetic structure of three wild American Oryza species with isozyme markers, 14 populations of the diploid O. glumaepatula (AglAgl), 11 populations of the tetraploid O. grandiglumis (CCDD) and five populations of the also tetraploid O. latifolia (CCDD) were studied. They were all originated from Rio Paraguay hydrographic basin and the Amazon. Four enzymes were used and they gave 40 polymorphic bands. The most polymorphic species was O. glumaepatula, followed by O. latifolia and O. grandiglumis. A cluster analysis with the Jaccard similarity coefficient separated the diploid from the two tetraploid species, and also the two tetraploid species. This separation was also evident on a scatter plot from a principal component analysis, suggesting that they should be treated as two separate species, although further studies are necessary to provide support for this affirmative. The AMOVA analyses showed a high intrapopulational variability for O. latifolia (67.6%) and O. grandiglumis (52.2%), when compared to their interpopulational variability (32.4% and 47.8%, respectively), which suggests the hypothesis of a higher degree of outcrossing events within these species. When studying the correlation between the Jaccard dissimilarity coefficient and geographic distances, a spatial genetic structure was observed for O. glumaepatula only. These results are important for defining strategies of both in situ and ex situ conservation. |
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2018-11-05T17:31:48Z2018-11-05T17:31:48Z2011-08VEASEY, Elizabeth Ann et al. Genetic diversity of American wild rice species. Scientia Agricola, Piracicaba, SP, v. 68, n. 4, p. 440-446, jul./ago. 2011. Disponível em: <http://repositorio.ufpa.br/jspui/handle/2011/10365>. Acesso em:.1678-992Xhttp://repositorio.ufpa.br/jspui/handle/2011/10365http://dx.doi.org/10.1590/S0103-90162011000400008Studies on genetic diversity and genetic structure of natural populations are important in order to define strategies for in situ and ex situ conservation actions and for plant pre-breeding programs. Aiming to assess the genetic diversity and genetic structure of three wild American Oryza species with isozyme markers, 14 populations of the diploid O. glumaepatula (AglAgl), 11 populations of the tetraploid O. grandiglumis (CCDD) and five populations of the also tetraploid O. latifolia (CCDD) were studied. They were all originated from Rio Paraguay hydrographic basin and the Amazon. Four enzymes were used and they gave 40 polymorphic bands. The most polymorphic species was O. glumaepatula, followed by O. latifolia and O. grandiglumis. A cluster analysis with the Jaccard similarity coefficient separated the diploid from the two tetraploid species, and also the two tetraploid species. This separation was also evident on a scatter plot from a principal component analysis, suggesting that they should be treated as two separate species, although further studies are necessary to provide support for this affirmative. The AMOVA analyses showed a high intrapopulational variability for O. latifolia (67.6%) and O. grandiglumis (52.2%), when compared to their interpopulational variability (32.4% and 47.8%, respectively), which suggests the hypothesis of a higher degree of outcrossing events within these species. When studying the correlation between the Jaccard dissimilarity coefficient and geographic distances, a spatial genetic structure was observed for O. glumaepatula only. These results are important for defining strategies of both in situ and ex situ conservation.SILVA, R. M. Universidade Federal do ParáengUniversidade Federal do ParáUFPABrasilScientia Agricolahttp://www.scielo.br/scielo.php?script=sci_arttext&pid=S0103-90162011000400008&lng=pt&nrm=isoreponame:Repositório Institucional da UFPAinstname:Universidade Federal do Pará (UFPA)instacron:UFPACNPQ::CIENCIAS AGRARIAS::RECURSOS FLORESTAIS E ENGENHARIA FLORESTAL::SILVICULTURA::GENETICA E MELHORAMENTO FLORESTALGenética vegetalArroz selvagemOryza glumaepatulaOryza latifoliaOryza grandiglumisGenetic diversity of American wild rice speciesinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/article684440446http://lattes.cnpq.br/8454553859685834http://lattes.cnpq.br/4932817846629535http://lattes.cnpq.br/2083064025342283http://lattes.cnpq.br/2217556709443591http://lattes.cnpq.br/9573209586508106http://lattes.cnpq.br/2570627659935507VEASEY, Elizabeth AnnBRESSAN, Eduardo de AndradeZUCCHI, Maria ImaculadaVENCOVSKY, RolandCARDIM, Daruska CavalcanteSILVA, Rainério Meireles dainfo:eu-repo/semantics/openAccessORIGINALArticle_GeneticDiversityAmerican.pdfArticle_GeneticDiversityAmerican.pdfapplication/pdf406598http://repositorio.ufpa.br/oai/bitstream/2011/10365/1/Article_GeneticDiversityAmerican.pdf2125f53f8fc80f45c9acae604679ca85MD51CC-LICENSElicense_urllicense_urltext/plain; charset=utf-849http://repositorio.ufpa.br/oai/bitstream/2011/10365/2/license_url4afdbb8c545fd630ea7db775da747b2fMD52license_textlicense_texttext/html; charset=utf-80http://repositorio.ufpa.br/oai/bitstream/2011/10365/3/license_textd41d8cd98f00b204e9800998ecf8427eMD53license_rdflicense_rdfapplication/rdf+xml; charset=utf-80http://repositorio.ufpa.br/oai/bitstream/2011/10365/4/license_rdfd41d8cd98f00b204e9800998ecf8427eMD54LICENSElicense.txtlicense.txttext/plain; charset=utf-81899http://repositorio.ufpa.br/oai/bitstream/2011/10365/5/license.txt9d4d300cff78e8f375d89aab37134138MD55TEXTArticle_GeneticDiversityAmerican.pdf.txtArticle_GeneticDiversityAmerican.pdf.txtExtracted texttext/plain36313http://repositorio.ufpa.br/oai/bitstream/2011/10365/6/Article_GeneticDiversityAmerican.pdf.txt4d0bbd559bb1e254f9792b778b780c16MD562011/103652019-09-24 15:29:43.778oai:repositorio.ufpa.br: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ório InstitucionalPUBhttp://repositorio.ufpa.br/oai/requestriufpabc@ufpa.bropendoar:21232019-09-24T18:29:43Repositório Institucional da UFPA - Universidade Federal do Pará (UFPA)false |
dc.title.pt_BR.fl_str_mv |
Genetic diversity of American wild rice species |
title |
Genetic diversity of American wild rice species |
spellingShingle |
Genetic diversity of American wild rice species VEASEY, Elizabeth Ann CNPQ::CIENCIAS AGRARIAS::RECURSOS FLORESTAIS E ENGENHARIA FLORESTAL::SILVICULTURA::GENETICA E MELHORAMENTO FLORESTAL Genética vegetal Arroz selvagem Oryza glumaepatula Oryza latifolia Oryza grandiglumis |
title_short |
Genetic diversity of American wild rice species |
title_full |
Genetic diversity of American wild rice species |
title_fullStr |
Genetic diversity of American wild rice species |
title_full_unstemmed |
Genetic diversity of American wild rice species |
title_sort |
Genetic diversity of American wild rice species |
author |
VEASEY, Elizabeth Ann |
author_facet |
VEASEY, Elizabeth Ann BRESSAN, Eduardo de Andrade ZUCCHI, Maria Imaculada VENCOVSKY, Roland CARDIM, Daruska Cavalcante SILVA, Rainério Meireles da |
author_role |
author |
author2 |
BRESSAN, Eduardo de Andrade ZUCCHI, Maria Imaculada VENCOVSKY, Roland CARDIM, Daruska Cavalcante SILVA, Rainério Meireles da |
author2_role |
author author author author author |
dc.contributor.authorLattes.fl_str_mv |
http://lattes.cnpq.br/8454553859685834 http://lattes.cnpq.br/4932817846629535 http://lattes.cnpq.br/2083064025342283 http://lattes.cnpq.br/2217556709443591 http://lattes.cnpq.br/9573209586508106 http://lattes.cnpq.br/2570627659935507 |
dc.contributor.author.fl_str_mv |
VEASEY, Elizabeth Ann BRESSAN, Eduardo de Andrade ZUCCHI, Maria Imaculada VENCOVSKY, Roland CARDIM, Daruska Cavalcante SILVA, Rainério Meireles da |
dc.subject.cnpq.fl_str_mv |
CNPQ::CIENCIAS AGRARIAS::RECURSOS FLORESTAIS E ENGENHARIA FLORESTAL::SILVICULTURA::GENETICA E MELHORAMENTO FLORESTAL |
topic |
CNPQ::CIENCIAS AGRARIAS::RECURSOS FLORESTAIS E ENGENHARIA FLORESTAL::SILVICULTURA::GENETICA E MELHORAMENTO FLORESTAL Genética vegetal Arroz selvagem Oryza glumaepatula Oryza latifolia Oryza grandiglumis |
dc.subject.por.fl_str_mv |
Genética vegetal Arroz selvagem Oryza glumaepatula Oryza latifolia Oryza grandiglumis |
description |
Studies on genetic diversity and genetic structure of natural populations are important in order to define strategies for in situ and ex situ conservation actions and for plant pre-breeding programs. Aiming to assess the genetic diversity and genetic structure of three wild American Oryza species with isozyme markers, 14 populations of the diploid O. glumaepatula (AglAgl), 11 populations of the tetraploid O. grandiglumis (CCDD) and five populations of the also tetraploid O. latifolia (CCDD) were studied. They were all originated from Rio Paraguay hydrographic basin and the Amazon. Four enzymes were used and they gave 40 polymorphic bands. The most polymorphic species was O. glumaepatula, followed by O. latifolia and O. grandiglumis. A cluster analysis with the Jaccard similarity coefficient separated the diploid from the two tetraploid species, and also the two tetraploid species. This separation was also evident on a scatter plot from a principal component analysis, suggesting that they should be treated as two separate species, although further studies are necessary to provide support for this affirmative. The AMOVA analyses showed a high intrapopulational variability for O. latifolia (67.6%) and O. grandiglumis (52.2%), when compared to their interpopulational variability (32.4% and 47.8%, respectively), which suggests the hypothesis of a higher degree of outcrossing events within these species. When studying the correlation between the Jaccard dissimilarity coefficient and geographic distances, a spatial genetic structure was observed for O. glumaepatula only. These results are important for defining strategies of both in situ and ex situ conservation. |
publishDate |
2011 |
dc.date.issued.fl_str_mv |
2011-08 |
dc.date.accessioned.fl_str_mv |
2018-11-05T17:31:48Z |
dc.date.available.fl_str_mv |
2018-11-05T17:31:48Z |
dc.type.status.fl_str_mv |
info:eu-repo/semantics/publishedVersion |
dc.type.driver.fl_str_mv |
info:eu-repo/semantics/article |
format |
article |
status_str |
publishedVersion |
dc.identifier.citation.fl_str_mv |
VEASEY, Elizabeth Ann et al. Genetic diversity of American wild rice species. Scientia Agricola, Piracicaba, SP, v. 68, n. 4, p. 440-446, jul./ago. 2011. Disponível em: <http://repositorio.ufpa.br/jspui/handle/2011/10365>. Acesso em:. |
dc.identifier.uri.fl_str_mv |
http://repositorio.ufpa.br/jspui/handle/2011/10365 |
dc.identifier.issn.pt_BR.fl_str_mv |
1678-992X |
dc.identifier.doi.pt_BR.fl_str_mv |
http://dx.doi.org/10.1590/S0103-90162011000400008 |
identifier_str_mv |
VEASEY, Elizabeth Ann et al. Genetic diversity of American wild rice species. Scientia Agricola, Piracicaba, SP, v. 68, n. 4, p. 440-446, jul./ago. 2011. Disponível em: <http://repositorio.ufpa.br/jspui/handle/2011/10365>. Acesso em:. 1678-992X |
url |
http://repositorio.ufpa.br/jspui/handle/2011/10365 http://dx.doi.org/10.1590/S0103-90162011000400008 |
dc.language.iso.fl_str_mv |
eng |
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eng |
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Scientia Agricola |
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openAccess |
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Universidade Federal do Pará |
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Brasil |
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Universidade Federal do Pará |
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