Análise In Silico de elementos transponíveis de Drosophila willistoni
Autor(a) principal: | |
---|---|
Data de Publicação: | 2018 |
Tipo de documento: | Trabalho de conclusão de curso |
Idioma: | eng |
Título da fonte: | Repositório Institucional da UFRGS |
Texto Completo: | http://hdl.handle.net/10183/198334 |
Resumo: | Transposable elements (TEs) are DNA sequences capable of moving within a genome. TEs, through their mobility, are a important aspect of organisms' genome arrangement, so they can be used as important tools to studying genome evolution and gene function. Drosophila willistoni is an model organism for TEs researches, as some of those elements existence and properties have been discovered in the Drosophila genus. D. willistoni had its genome entirely sequenced, being an interesting target for in silico studies. As such, this project had the objective of doing an in silico scan of four TE copies (412, hobo, BuT2, Mar). Homologue sequences of those four elements were detected. Copies were submitted to phylogenetic trees models to evaluate their proximity. The obtained results bring valuable insights of those TEs. Nevertheless, new approaches, such as in situ studies of the elements, are necessary to better understand the evolution of D. willistoni and its TEs. |
id |
UFRGS-2_0242c2a3a350b6d4e56a11427599c1e5 |
---|---|
oai_identifier_str |
oai:www.lume.ufrgs.br:10183/198334 |
network_acronym_str |
UFRGS-2 |
network_name_str |
Repositório Institucional da UFRGS |
repository_id_str |
|
spelling |
Mapelli, Pedro HenriqueDeprá, Maríndia2019-08-23T02:30:09Z2018http://hdl.handle.net/10183/198334001097559Transposable elements (TEs) are DNA sequences capable of moving within a genome. TEs, through their mobility, are a important aspect of organisms' genome arrangement, so they can be used as important tools to studying genome evolution and gene function. Drosophila willistoni is an model organism for TEs researches, as some of those elements existence and properties have been discovered in the Drosophila genus. D. willistoni had its genome entirely sequenced, being an interesting target for in silico studies. As such, this project had the objective of doing an in silico scan of four TE copies (412, hobo, BuT2, Mar). Homologue sequences of those four elements were detected. Copies were submitted to phylogenetic trees models to evaluate their proximity. The obtained results bring valuable insights of those TEs. Nevertheless, new approaches, such as in situ studies of the elements, are necessary to better understand the evolution of D. willistoni and its TEs.application/pdfengDrosophila willistoniTransposable elementsIn silicoAnálise In Silico de elementos transponíveis de Drosophila willistoniIn Silico Analysis of Transposable Elements in Drosophila willistoni info:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/bachelorThesisUniversidade Federal do Rio Grande do SulInstituto de BiociênciasPorto Alegre, BR-RS2018Ciências Biológicas: Bachareladograduaçãoinfo:eu-repo/semantics/openAccessreponame:Repositório Institucional da UFRGSinstname:Universidade Federal do Rio Grande do Sul (UFRGS)instacron:UFRGSTEXT001097559.pdf.txt001097559.pdf.txtExtracted Texttext/plain26617http://www.lume.ufrgs.br/bitstream/10183/198334/2/001097559.pdf.txte26f11dd20f2307e9d972a88c76148c9MD52ORIGINAL001097559.pdfTexto completo (inglês)application/pdf1004156http://www.lume.ufrgs.br/bitstream/10183/198334/1/001097559.pdff4d31bb9c03e5d6a3eb9fe6d43309532MD5110183/1983342021-05-26 04:38:54.858356oai:www.lume.ufrgs.br:10183/198334Repositório de PublicaçõesPUBhttps://lume.ufrgs.br/oai/requestopendoar:2021-05-26T07:38:54Repositório Institucional da UFRGS - Universidade Federal do Rio Grande do Sul (UFRGS)false |
dc.title.pt_BR.fl_str_mv |
Análise In Silico de elementos transponíveis de Drosophila willistoni |
dc.title.alternative.en.fl_str_mv |
In Silico Analysis of Transposable Elements in Drosophila willistoni |
title |
Análise In Silico de elementos transponíveis de Drosophila willistoni |
spellingShingle |
Análise In Silico de elementos transponíveis de Drosophila willistoni Mapelli, Pedro Henrique Drosophila willistoni Transposable elements In silico |
title_short |
Análise In Silico de elementos transponíveis de Drosophila willistoni |
title_full |
Análise In Silico de elementos transponíveis de Drosophila willistoni |
title_fullStr |
Análise In Silico de elementos transponíveis de Drosophila willistoni |
title_full_unstemmed |
Análise In Silico de elementos transponíveis de Drosophila willistoni |
title_sort |
Análise In Silico de elementos transponíveis de Drosophila willistoni |
author |
Mapelli, Pedro Henrique |
author_facet |
Mapelli, Pedro Henrique |
author_role |
author |
dc.contributor.author.fl_str_mv |
Mapelli, Pedro Henrique |
dc.contributor.advisor1.fl_str_mv |
Deprá, Maríndia |
contributor_str_mv |
Deprá, Maríndia |
dc.subject.por.fl_str_mv |
Drosophila willistoni |
topic |
Drosophila willistoni Transposable elements In silico |
dc.subject.eng.fl_str_mv |
Transposable elements In silico |
description |
Transposable elements (TEs) are DNA sequences capable of moving within a genome. TEs, through their mobility, are a important aspect of organisms' genome arrangement, so they can be used as important tools to studying genome evolution and gene function. Drosophila willistoni is an model organism for TEs researches, as some of those elements existence and properties have been discovered in the Drosophila genus. D. willistoni had its genome entirely sequenced, being an interesting target for in silico studies. As such, this project had the objective of doing an in silico scan of four TE copies (412, hobo, BuT2, Mar). Homologue sequences of those four elements were detected. Copies were submitted to phylogenetic trees models to evaluate their proximity. The obtained results bring valuable insights of those TEs. Nevertheless, new approaches, such as in situ studies of the elements, are necessary to better understand the evolution of D. willistoni and its TEs. |
publishDate |
2018 |
dc.date.issued.fl_str_mv |
2018 |
dc.date.accessioned.fl_str_mv |
2019-08-23T02:30:09Z |
dc.type.status.fl_str_mv |
info:eu-repo/semantics/publishedVersion |
dc.type.driver.fl_str_mv |
info:eu-repo/semantics/bachelorThesis |
format |
bachelorThesis |
status_str |
publishedVersion |
dc.identifier.uri.fl_str_mv |
http://hdl.handle.net/10183/198334 |
dc.identifier.nrb.pt_BR.fl_str_mv |
001097559 |
url |
http://hdl.handle.net/10183/198334 |
identifier_str_mv |
001097559 |
dc.language.iso.fl_str_mv |
eng |
language |
eng |
dc.rights.driver.fl_str_mv |
info:eu-repo/semantics/openAccess |
eu_rights_str_mv |
openAccess |
dc.format.none.fl_str_mv |
application/pdf |
dc.source.none.fl_str_mv |
reponame:Repositório Institucional da UFRGS instname:Universidade Federal do Rio Grande do Sul (UFRGS) instacron:UFRGS |
instname_str |
Universidade Federal do Rio Grande do Sul (UFRGS) |
instacron_str |
UFRGS |
institution |
UFRGS |
reponame_str |
Repositório Institucional da UFRGS |
collection |
Repositório Institucional da UFRGS |
bitstream.url.fl_str_mv |
http://www.lume.ufrgs.br/bitstream/10183/198334/2/001097559.pdf.txt http://www.lume.ufrgs.br/bitstream/10183/198334/1/001097559.pdf |
bitstream.checksum.fl_str_mv |
e26f11dd20f2307e9d972a88c76148c9 f4d31bb9c03e5d6a3eb9fe6d43309532 |
bitstream.checksumAlgorithm.fl_str_mv |
MD5 MD5 |
repository.name.fl_str_mv |
Repositório Institucional da UFRGS - Universidade Federal do Rio Grande do Sul (UFRGS) |
repository.mail.fl_str_mv |
|
_version_ |
1801224579016818688 |