Machine learning solutions applied to amyotrophic lateral sclerosis prognosis: a review

Detalhes bibliográficos
Autor(a) principal: Dourado Junior, Mário Emílio Teixeira
Data de Publicação: 2022
Outros Autores: Papaiz, Fabiano, Valentim, Ricardo Alexsandro de Medeiros, Morais, Antonio Higor Freire de, Arrais, Joel Perdiz
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Institucional da UFRN
Texto Completo: https://repositorio.ufrn.br/handle/123456789/54162
https://doi.org/10.3389/fcomp.2022.869140
Resumo: The prognosis of Amyotrophic Lateral Sclerosis (ALS), a complex and rare disease, represents a challenging and essential task to better comprehend its progression and improve patients' quality of life. The use of Machine Learning (ML) techniques in healthcare has produced valuable contributions to the prognosis field. This article presents a systematic and critical review of primary studies that used ML applied to the ALS prognosis, searching for databases, relevant predictor biomarkers, the ML algorithms and techniques, and their outcomes. We focused on studies that analyzed biomarkers commonly present in the ALS disease clinical practice, such as demographic, clinical, laboratory, and imaging data. Hence, we investigate studies to provide an overview of solutions that can be applied to develop decision support systems and be used by a higher number of ALS clinical settings. The studies were retrieved from PubMed, Science Direct, IEEEXplore, and Web of Science databases. After completing the searching and screening process, 10 articles were selected to be analyzed and summarized. The studies evaluated and used different ML algorithms, techniques, datasets, sample sizes, biomarkers, and performance metrics. Based on the results, three distinct types of prediction were identified: Disease Progression, Survival Time, and Need for Support. The biomarkers identified as relevant in more than one study were the ALSFRS/ALSFRS-R, disease duration, Forced Vital Capacity, Body Mass Index, age at onset, and Creatinine. In general, the studies presented promissory results that can be applied in developing decision support systems. Besides, we discussed the open challenges, the limitations identified, and future research opportunities.
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spelling Dourado Junior, Mário Emílio TeixeiraPapaiz, FabianoValentim, Ricardo Alexsandro de MedeirosMorais, Antonio Higor Freire deArrais, Joel Perdizhttps://orcid.org/0000-0002-9462-22942023-07-25T19:30:23Z2023-07-25T19:30:23Z2022PAPAIZ, Fabiano; DOURADO, Mario Emílio Teixeira; VALENTIM, Ricardo Alexsandro de Medeiros; MORAIS, Antonio Higor Freire de; ARRAIS, Joel Perdiz. Machine Learning Solutions Applied to Amyotrophic Lateral Sclerosis Prognosis: a review. Frontiers In Computer Science, [S.L.], v. 4, p. 1, 28 abr. 2022. Frontiers Media SA. http://dx.doi.org/10.3389/fcomp.2022.869140. Disponível em: https://www.frontiersin.org/articles/10.3389/fcomp.2022.869140/full. Acesso em: 13 jul. 2023.https://repositorio.ufrn.br/handle/123456789/54162https://doi.org/10.3389/fcomp.2022.869140Computer ScienceAttribution 3.0 Brazilhttp://creativecommons.org/licenses/by/3.0/br/info:eu-repo/semantics/openAccessamyotrophic lateral sclerosisprognosismachine learninghealth informaticsliterature reviewMachine learning solutions applied to amyotrophic lateral sclerosis prognosis: a reviewinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articleThe prognosis of Amyotrophic Lateral Sclerosis (ALS), a complex and rare disease, represents a challenging and essential task to better comprehend its progression and improve patients' quality of life. The use of Machine Learning (ML) techniques in healthcare has produced valuable contributions to the prognosis field. This article presents a systematic and critical review of primary studies that used ML applied to the ALS prognosis, searching for databases, relevant predictor biomarkers, the ML algorithms and techniques, and their outcomes. We focused on studies that analyzed biomarkers commonly present in the ALS disease clinical practice, such as demographic, clinical, laboratory, and imaging data. Hence, we investigate studies to provide an overview of solutions that can be applied to develop decision support systems and be used by a higher number of ALS clinical settings. The studies were retrieved from PubMed, Science Direct, IEEEXplore, and Web of Science databases. After completing the searching and screening process, 10 articles were selected to be analyzed and summarized. The studies evaluated and used different ML algorithms, techniques, datasets, sample sizes, biomarkers, and performance metrics. Based on the results, three distinct types of prediction were identified: Disease Progression, Survival Time, and Need for Support. The biomarkers identified as relevant in more than one study were the ALSFRS/ALSFRS-R, disease duration, Forced Vital Capacity, Body Mass Index, age at onset, and Creatinine. In general, the studies presented promissory results that can be applied in developing decision support systems. Besides, we discussed the open challenges, the limitations identified, and future research opportunities.engreponame:Repositório Institucional da UFRNinstname:Universidade Federal do Rio Grande do Norte (UFRN)instacron:UFRNORIGINALMachineLearningSolutions_DouradoJunior_2022.pdfMachineLearningSolutions_DouradoJunior_2022.pdfapplication/pdf595988https://repositorio.ufrn.br/bitstream/123456789/54162/1/MachineLearningSolutions_DouradoJunior_2022.pdf2eb06d37a4a3e4433d77e29a5430f115MD51LICENSElicense.txtlicense.txttext/plain; charset=utf-81484https://repositorio.ufrn.br/bitstream/123456789/54162/2/license.txte9597aa2854d128fd968be5edc8a28d9MD52123456789/541622023-07-25 16:31:33.852oai:https://repositorio.ufrn.br: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Repositório de PublicaçõesPUBhttp://repositorio.ufrn.br/oai/opendoar:2023-07-25T19:31:33Repositório Institucional da UFRN - Universidade Federal do Rio Grande do Norte (UFRN)false
dc.title.pt_BR.fl_str_mv Machine learning solutions applied to amyotrophic lateral sclerosis prognosis: a review
title Machine learning solutions applied to amyotrophic lateral sclerosis prognosis: a review
spellingShingle Machine learning solutions applied to amyotrophic lateral sclerosis prognosis: a review
Dourado Junior, Mário Emílio Teixeira
amyotrophic lateral sclerosis
prognosis
machine learning
health informatics
literature review
title_short Machine learning solutions applied to amyotrophic lateral sclerosis prognosis: a review
title_full Machine learning solutions applied to amyotrophic lateral sclerosis prognosis: a review
title_fullStr Machine learning solutions applied to amyotrophic lateral sclerosis prognosis: a review
title_full_unstemmed Machine learning solutions applied to amyotrophic lateral sclerosis prognosis: a review
title_sort Machine learning solutions applied to amyotrophic lateral sclerosis prognosis: a review
author Dourado Junior, Mário Emílio Teixeira
author_facet Dourado Junior, Mário Emílio Teixeira
Papaiz, Fabiano
Valentim, Ricardo Alexsandro de Medeiros
Morais, Antonio Higor Freire de
Arrais, Joel Perdiz
author_role author
author2 Papaiz, Fabiano
Valentim, Ricardo Alexsandro de Medeiros
Morais, Antonio Higor Freire de
Arrais, Joel Perdiz
author2_role author
author
author
author
dc.contributor.authorID.pt_BR.fl_str_mv https://orcid.org/0000-0002-9462-2294
dc.contributor.author.fl_str_mv Dourado Junior, Mário Emílio Teixeira
Papaiz, Fabiano
Valentim, Ricardo Alexsandro de Medeiros
Morais, Antonio Higor Freire de
Arrais, Joel Perdiz
dc.subject.por.fl_str_mv amyotrophic lateral sclerosis
prognosis
machine learning
health informatics
literature review
topic amyotrophic lateral sclerosis
prognosis
machine learning
health informatics
literature review
description The prognosis of Amyotrophic Lateral Sclerosis (ALS), a complex and rare disease, represents a challenging and essential task to better comprehend its progression and improve patients' quality of life. The use of Machine Learning (ML) techniques in healthcare has produced valuable contributions to the prognosis field. This article presents a systematic and critical review of primary studies that used ML applied to the ALS prognosis, searching for databases, relevant predictor biomarkers, the ML algorithms and techniques, and their outcomes. We focused on studies that analyzed biomarkers commonly present in the ALS disease clinical practice, such as demographic, clinical, laboratory, and imaging data. Hence, we investigate studies to provide an overview of solutions that can be applied to develop decision support systems and be used by a higher number of ALS clinical settings. The studies were retrieved from PubMed, Science Direct, IEEEXplore, and Web of Science databases. After completing the searching and screening process, 10 articles were selected to be analyzed and summarized. The studies evaluated and used different ML algorithms, techniques, datasets, sample sizes, biomarkers, and performance metrics. Based on the results, three distinct types of prediction were identified: Disease Progression, Survival Time, and Need for Support. The biomarkers identified as relevant in more than one study were the ALSFRS/ALSFRS-R, disease duration, Forced Vital Capacity, Body Mass Index, age at onset, and Creatinine. In general, the studies presented promissory results that can be applied in developing decision support systems. Besides, we discussed the open challenges, the limitations identified, and future research opportunities.
publishDate 2022
dc.date.issued.fl_str_mv 2022
dc.date.accessioned.fl_str_mv 2023-07-25T19:30:23Z
dc.date.available.fl_str_mv 2023-07-25T19:30:23Z
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dc.identifier.citation.fl_str_mv PAPAIZ, Fabiano; DOURADO, Mario Emílio Teixeira; VALENTIM, Ricardo Alexsandro de Medeiros; MORAIS, Antonio Higor Freire de; ARRAIS, Joel Perdiz. Machine Learning Solutions Applied to Amyotrophic Lateral Sclerosis Prognosis: a review. Frontiers In Computer Science, [S.L.], v. 4, p. 1, 28 abr. 2022. Frontiers Media SA. http://dx.doi.org/10.3389/fcomp.2022.869140. Disponível em: https://www.frontiersin.org/articles/10.3389/fcomp.2022.869140/full. Acesso em: 13 jul. 2023.
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dc.identifier.doi.none.fl_str_mv https://doi.org/10.3389/fcomp.2022.869140
identifier_str_mv PAPAIZ, Fabiano; DOURADO, Mario Emílio Teixeira; VALENTIM, Ricardo Alexsandro de Medeiros; MORAIS, Antonio Higor Freire de; ARRAIS, Joel Perdiz. Machine Learning Solutions Applied to Amyotrophic Lateral Sclerosis Prognosis: a review. Frontiers In Computer Science, [S.L.], v. 4, p. 1, 28 abr. 2022. Frontiers Media SA. http://dx.doi.org/10.3389/fcomp.2022.869140. Disponível em: https://www.frontiersin.org/articles/10.3389/fcomp.2022.869140/full. Acesso em: 13 jul. 2023.
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