Low density genomic data for animal breeding: critical analysis and perspectives of the GoldenGate Beadxpress technology

Detalhes bibliográficos
Autor(a) principal: Araújo,Ronyere Olegário de
Data de Publicação: 2016
Outros Autores: Caetano,Alexandre Rodrigues
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Ciência Rural
Texto Completo: http://old.scielo.br/scielo.php?script=sci_arttext&pid=S0103-84782016001102005
Resumo: ABSTRACT: The increasing development of DNA sequencing and genotyping technologies has made possible to analyze the genomes of several species. Genomic studies of production animals have greatly increased the understanding of mechanisms that control the interactions of genetic and environmental factors involved in the expression of traits of economic importance. Several technologies have been presented by different companies for the genotyping of low-density SNP panels, which may be used in different applications with different goals, such as paternity testing, diagnosis of genetic diseases, and identification of genetically superior animals based on polymorphisms characterized in candidate genes. The present review critically analyzes the GoldenGate Beadxpress technology and puts its use in these applications into perspective.
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spelling Low density genomic data for animal breeding: critical analysis and perspectives of the GoldenGate Beadxpress technologySNP genotypingGoldenGate technologyhaplotypic blockscustom SNP panelsassociation studiesABSTRACT: The increasing development of DNA sequencing and genotyping technologies has made possible to analyze the genomes of several species. Genomic studies of production animals have greatly increased the understanding of mechanisms that control the interactions of genetic and environmental factors involved in the expression of traits of economic importance. Several technologies have been presented by different companies for the genotyping of low-density SNP panels, which may be used in different applications with different goals, such as paternity testing, diagnosis of genetic diseases, and identification of genetically superior animals based on polymorphisms characterized in candidate genes. The present review critically analyzes the GoldenGate Beadxpress technology and puts its use in these applications into perspective.Universidade Federal de Santa Maria2016-11-01info:eu-repo/semantics/articleinfo:eu-repo/semantics/publishedVersiontext/htmlhttp://old.scielo.br/scielo.php?script=sci_arttext&pid=S0103-84782016001102005Ciência Rural v.46 n.11 2016reponame:Ciência Ruralinstname:Universidade Federal de Santa Maria (UFSM)instacron:UFSM10.1590/0103-8478cr20151622info:eu-repo/semantics/openAccessAraújo,Ronyere Olegário deCaetano,Alexandre Rodrigueseng2016-09-28T00:00:00ZRevista
dc.title.none.fl_str_mv Low density genomic data for animal breeding: critical analysis and perspectives of the GoldenGate Beadxpress technology
title Low density genomic data for animal breeding: critical analysis and perspectives of the GoldenGate Beadxpress technology
spellingShingle Low density genomic data for animal breeding: critical analysis and perspectives of the GoldenGate Beadxpress technology
Araújo,Ronyere Olegário de
SNP genotyping
GoldenGate technology
haplotypic blocks
custom SNP panels
association studies
title_short Low density genomic data for animal breeding: critical analysis and perspectives of the GoldenGate Beadxpress technology
title_full Low density genomic data for animal breeding: critical analysis and perspectives of the GoldenGate Beadxpress technology
title_fullStr Low density genomic data for animal breeding: critical analysis and perspectives of the GoldenGate Beadxpress technology
title_full_unstemmed Low density genomic data for animal breeding: critical analysis and perspectives of the GoldenGate Beadxpress technology
title_sort Low density genomic data for animal breeding: critical analysis and perspectives of the GoldenGate Beadxpress technology
author Araújo,Ronyere Olegário de
author_facet Araújo,Ronyere Olegário de
Caetano,Alexandre Rodrigues
author_role author
author2 Caetano,Alexandre Rodrigues
author2_role author
dc.contributor.author.fl_str_mv Araújo,Ronyere Olegário de
Caetano,Alexandre Rodrigues
dc.subject.por.fl_str_mv SNP genotyping
GoldenGate technology
haplotypic blocks
custom SNP panels
association studies
topic SNP genotyping
GoldenGate technology
haplotypic blocks
custom SNP panels
association studies
description ABSTRACT: The increasing development of DNA sequencing and genotyping technologies has made possible to analyze the genomes of several species. Genomic studies of production animals have greatly increased the understanding of mechanisms that control the interactions of genetic and environmental factors involved in the expression of traits of economic importance. Several technologies have been presented by different companies for the genotyping of low-density SNP panels, which may be used in different applications with different goals, such as paternity testing, diagnosis of genetic diseases, and identification of genetically superior animals based on polymorphisms characterized in candidate genes. The present review critically analyzes the GoldenGate Beadxpress technology and puts its use in these applications into perspective.
publishDate 2016
dc.date.none.fl_str_mv 2016-11-01
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv http://old.scielo.br/scielo.php?script=sci_arttext&pid=S0103-84782016001102005
url http://old.scielo.br/scielo.php?script=sci_arttext&pid=S0103-84782016001102005
dc.language.iso.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv 10.1590/0103-8478cr20151622
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
eu_rights_str_mv openAccess
dc.format.none.fl_str_mv text/html
dc.publisher.none.fl_str_mv Universidade Federal de Santa Maria
publisher.none.fl_str_mv Universidade Federal de Santa Maria
dc.source.none.fl_str_mv Ciência Rural v.46 n.11 2016
reponame:Ciência Rural
instname:Universidade Federal de Santa Maria (UFSM)
instacron:UFSM
instname_str Universidade Federal de Santa Maria (UFSM)
instacron_str UFSM
institution UFSM
reponame_str Ciência Rural
collection Ciência Rural
repository.name.fl_str_mv
repository.mail.fl_str_mv
_version_ 1749140550815055872

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