Estudos in vitro e de modelagem molecular in silico aplicados à interação entre a enzima delta-aminolevulinato desidratase e metais do grupo 10 (níquel, paládio e platina) e 11 (cobre, prata e ouro) da tabela periódica

Detalhes bibliográficos
Autor(a) principal: Klimaczewski, Cláudia Vargas
Data de Publicação: 2014
Tipo de documento: Dissertação
Idioma: por
Título da fonte: Manancial - Repositório Digital da UFSM
Texto Completo: http://repositorio.ufsm.br/handle/1/18220
Resumo: Mammalian δ- aminolevulinate dehydratase (δ-ALA-D) is a metalloenzyme, which requires Zn(II) and reduced thiol groups for maximal catalytic activity, and is an important molecular target for the widespread environmental toxic metals. The mechanism underlying the δ-ALA-D inhibition by elements of Group 10 nickel (NiCl2), palladium (PdCl2), platinum (PtCl2 and PtCl4) and 11 cupper (CuSO4), silver (AgNO3), glod (AuCl3) of periodic table has not yet been determined. The main objective of the present study was to characterize the molecular mechanism of δ-ALA-D inhibition caused by salts of elements of Group 10 and 11 using in vitro (δ-ALA-D activity in human erythrocytes) and in silico (by geometry optimization with the program MOPAC20122 - PM6 method). Our results showed that Ni(II) and Pd(II) caused only a small inhibition (~ 10%) in the δ-ALA-D enzyme activity, and this inhibition was blunted by Zn(II). Pt forms significantly inhibited the enzymatic activity of δ- ALA-D (75% and 44%, respectively), but this inhibition was attenuated by Zn (II) and DTT, indicating that when moved the element most light to the heavier component, tends to change inhibition in a competition for Zn (II) for the oxidation of thiols. In group 11, all metals inhibited δ-ALA-D, and in accordance with data in vitro and in silico the mechanism of inhibition seems to be related to the oxidation of thiol groups of the active site, while incubation with Zn (II) appears to block the inhibitory mechanism of the metals of the group 11 for protecting the active enzyme.
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spelling Estudos in vitro e de modelagem molecular in silico aplicados à interação entre a enzima delta-aminolevulinato desidratase e metais do grupo 10 (níquel, paládio e platina) e 11 (cobre, prata e ouro) da tabela periódicaStudies in vitro and molecular modeling in silico applied to the interaction between enzyme deltaaminolevulinate dehydratase and metals group 10 (nickel, palladium and platinum) and 11 (copper, silver and gold) the periodic tableδ-aminolevulinato desidrataseNiquelPaládioPlatinaCobrePrataOuroSítio ativoGrupos tióisZincoδ-aminolevulinic acid dehydrataseNickelPalladiumPlatinumCopperSilverGoldActive siteThiol groupsZincCNPQ::CIENCIAS BIOLOGICAS::BIOQUIMICAMammalian δ- aminolevulinate dehydratase (δ-ALA-D) is a metalloenzyme, which requires Zn(II) and reduced thiol groups for maximal catalytic activity, and is an important molecular target for the widespread environmental toxic metals. The mechanism underlying the δ-ALA-D inhibition by elements of Group 10 nickel (NiCl2), palladium (PdCl2), platinum (PtCl2 and PtCl4) and 11 cupper (CuSO4), silver (AgNO3), glod (AuCl3) of periodic table has not yet been determined. The main objective of the present study was to characterize the molecular mechanism of δ-ALA-D inhibition caused by salts of elements of Group 10 and 11 using in vitro (δ-ALA-D activity in human erythrocytes) and in silico (by geometry optimization with the program MOPAC20122 - PM6 method). Our results showed that Ni(II) and Pd(II) caused only a small inhibition (~ 10%) in the δ-ALA-D enzyme activity, and this inhibition was blunted by Zn(II). Pt forms significantly inhibited the enzymatic activity of δ- ALA-D (75% and 44%, respectively), but this inhibition was attenuated by Zn (II) and DTT, indicating that when moved the element most light to the heavier component, tends to change inhibition in a competition for Zn (II) for the oxidation of thiols. In group 11, all metals inhibited δ-ALA-D, and in accordance with data in vitro and in silico the mechanism of inhibition seems to be related to the oxidation of thiol groups of the active site, while incubation with Zn (II) appears to block the inhibitory mechanism of the metals of the group 11 for protecting the active enzyme.A enzima δ-aminolevulinato desidratase humana (δ-ALA-D) é uma metaloenzima que requer grupos tióis reduzidos e o metal Zn(II) para a atividade catalítica máxima, sendo consequentemente um alvo molecular importante para os metais tóxicos ambientais. Sendo assim, este estudo teve como objetivo caracterizar o mecanismo molecular de interação dos sais dos elementos do Grupo 10 niquel (NiCl2), paládio (PdCl2), platina (PtCl2 e PtCl4) e 11 cobre (CuSO4), prata (AgNO3), ouro (AuCl3) com o sítio ativo da δ-ALA-D, usando métodos in vitro (atividade da δ-ALA-D de eritrócitos humanos) e in silico (por optimização geométrica com o programa MOPAC20122 - método PM6). Nossos resultados mostraram que Ni(II) e Pd(II) causaram apenas uma pequena inibição (~10%) na atividade da δ-ALA-D de eritrócitos humanos, sendo que esta inibição foi revertida por Zn(II). Pt(II) e Pt(IV) inibiram significativamente a atividade enzimática da δ-ALA-D (75% E 44%, respectivamente) e oxidaram grupos tióis de cisteína e glutationa. A inibição causada na δ-ALA-D por estes metais foi atenuada por Zn (II) e DTT, indicando que à medida que avançamos do elemento mais leve para o elemento mais pesado, a inibição tende a mudar de uma competição por Zn(II) para oxidação de tióis. Já no grupo 11, todos os metais inibiram a enzima δ-ALA-D, e de acordo com dados in vitro e in silico o mecanismo de inibição parece estar relacionado com a oxidação dos grupos tióis do sítio ativo, enquanto que a incubação com Zn(II) parece bloquear o mecanismo inibitório dos metais do grupo 11 por proteger o sítio ativo da enzima.Universidade Federal de Santa MariaBrasilBioquímicaUFSMPrograma de Pós-Graduação em Ciências Biológicas: Bioquímica ToxicológicaCentro de Ciências Naturais e ExatasRocha, João Batista Teixeira dahttp://lattes.cnpq.br/3935055744673018Barbosa, Nilda Berenice de Vargashttp://lattes.cnpq.br/5901511067144019Pereira, Maria Esterhttp://lattes.cnpq.br/9299114496157799Pinton, Simonehttp://lattes.cnpq.br/1205982002582299Klimaczewski, Cláudia Vargas2019-09-12T19:26:08Z2019-09-12T19:26:08Z2014-08-05info:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/masterThesisapplication/pdfhttp://repositorio.ufsm.br/handle/1/18220porAttribution-NonCommercial-NoDerivatives 4.0 Internationalhttp://creativecommons.org/licenses/by-nc-nd/4.0/info:eu-repo/semantics/openAccessreponame:Manancial - Repositório Digital da UFSMinstname:Universidade Federal de Santa Maria (UFSM)instacron:UFSM2022-05-03T12:12:42Zoai:repositorio.ufsm.br:1/18220Biblioteca Digital de Teses e Dissertaçõeshttps://repositorio.ufsm.br/ONGhttps://repositorio.ufsm.br/oai/requestatendimento.sib@ufsm.br||tedebc@gmail.comopendoar:2022-05-03T12:12:42Manancial - Repositório Digital da UFSM - Universidade Federal de Santa Maria (UFSM)false
dc.title.none.fl_str_mv Estudos in vitro e de modelagem molecular in silico aplicados à interação entre a enzima delta-aminolevulinato desidratase e metais do grupo 10 (níquel, paládio e platina) e 11 (cobre, prata e ouro) da tabela periódica
Studies in vitro and molecular modeling in silico applied to the interaction between enzyme deltaaminolevulinate dehydratase and metals group 10 (nickel, palladium and platinum) and 11 (copper, silver and gold) the periodic table
title Estudos in vitro e de modelagem molecular in silico aplicados à interação entre a enzima delta-aminolevulinato desidratase e metais do grupo 10 (níquel, paládio e platina) e 11 (cobre, prata e ouro) da tabela periódica
spellingShingle Estudos in vitro e de modelagem molecular in silico aplicados à interação entre a enzima delta-aminolevulinato desidratase e metais do grupo 10 (níquel, paládio e platina) e 11 (cobre, prata e ouro) da tabela periódica
Klimaczewski, Cláudia Vargas
δ-aminolevulinato desidratase
Niquel
Paládio
Platina
Cobre
Prata
Ouro
Sítio ativo
Grupos tióis
Zinco
δ-aminolevulinic acid dehydratase
Nickel
Palladium
Platinum
Copper
Silver
Gold
Active site
Thiol groups
Zinc
CNPQ::CIENCIAS BIOLOGICAS::BIOQUIMICA
title_short Estudos in vitro e de modelagem molecular in silico aplicados à interação entre a enzima delta-aminolevulinato desidratase e metais do grupo 10 (níquel, paládio e platina) e 11 (cobre, prata e ouro) da tabela periódica
title_full Estudos in vitro e de modelagem molecular in silico aplicados à interação entre a enzima delta-aminolevulinato desidratase e metais do grupo 10 (níquel, paládio e platina) e 11 (cobre, prata e ouro) da tabela periódica
title_fullStr Estudos in vitro e de modelagem molecular in silico aplicados à interação entre a enzima delta-aminolevulinato desidratase e metais do grupo 10 (níquel, paládio e platina) e 11 (cobre, prata e ouro) da tabela periódica
title_full_unstemmed Estudos in vitro e de modelagem molecular in silico aplicados à interação entre a enzima delta-aminolevulinato desidratase e metais do grupo 10 (níquel, paládio e platina) e 11 (cobre, prata e ouro) da tabela periódica
title_sort Estudos in vitro e de modelagem molecular in silico aplicados à interação entre a enzima delta-aminolevulinato desidratase e metais do grupo 10 (níquel, paládio e platina) e 11 (cobre, prata e ouro) da tabela periódica
author Klimaczewski, Cláudia Vargas
author_facet Klimaczewski, Cláudia Vargas
author_role author
dc.contributor.none.fl_str_mv Rocha, João Batista Teixeira da
http://lattes.cnpq.br/3935055744673018
Barbosa, Nilda Berenice de Vargas
http://lattes.cnpq.br/5901511067144019
Pereira, Maria Ester
http://lattes.cnpq.br/9299114496157799
Pinton, Simone
http://lattes.cnpq.br/1205982002582299
dc.contributor.author.fl_str_mv Klimaczewski, Cláudia Vargas
dc.subject.por.fl_str_mv δ-aminolevulinato desidratase
Niquel
Paládio
Platina
Cobre
Prata
Ouro
Sítio ativo
Grupos tióis
Zinco
δ-aminolevulinic acid dehydratase
Nickel
Palladium
Platinum
Copper
Silver
Gold
Active site
Thiol groups
Zinc
CNPQ::CIENCIAS BIOLOGICAS::BIOQUIMICA
topic δ-aminolevulinato desidratase
Niquel
Paládio
Platina
Cobre
Prata
Ouro
Sítio ativo
Grupos tióis
Zinco
δ-aminolevulinic acid dehydratase
Nickel
Palladium
Platinum
Copper
Silver
Gold
Active site
Thiol groups
Zinc
CNPQ::CIENCIAS BIOLOGICAS::BIOQUIMICA
description Mammalian δ- aminolevulinate dehydratase (δ-ALA-D) is a metalloenzyme, which requires Zn(II) and reduced thiol groups for maximal catalytic activity, and is an important molecular target for the widespread environmental toxic metals. The mechanism underlying the δ-ALA-D inhibition by elements of Group 10 nickel (NiCl2), palladium (PdCl2), platinum (PtCl2 and PtCl4) and 11 cupper (CuSO4), silver (AgNO3), glod (AuCl3) of periodic table has not yet been determined. The main objective of the present study was to characterize the molecular mechanism of δ-ALA-D inhibition caused by salts of elements of Group 10 and 11 using in vitro (δ-ALA-D activity in human erythrocytes) and in silico (by geometry optimization with the program MOPAC20122 - PM6 method). Our results showed that Ni(II) and Pd(II) caused only a small inhibition (~ 10%) in the δ-ALA-D enzyme activity, and this inhibition was blunted by Zn(II). Pt forms significantly inhibited the enzymatic activity of δ- ALA-D (75% and 44%, respectively), but this inhibition was attenuated by Zn (II) and DTT, indicating that when moved the element most light to the heavier component, tends to change inhibition in a competition for Zn (II) for the oxidation of thiols. In group 11, all metals inhibited δ-ALA-D, and in accordance with data in vitro and in silico the mechanism of inhibition seems to be related to the oxidation of thiol groups of the active site, while incubation with Zn (II) appears to block the inhibitory mechanism of the metals of the group 11 for protecting the active enzyme.
publishDate 2014
dc.date.none.fl_str_mv 2014-08-05
2019-09-12T19:26:08Z
2019-09-12T19:26:08Z
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.driver.fl_str_mv info:eu-repo/semantics/masterThesis
format masterThesis
status_str publishedVersion
dc.identifier.uri.fl_str_mv http://repositorio.ufsm.br/handle/1/18220
url http://repositorio.ufsm.br/handle/1/18220
dc.language.iso.fl_str_mv por
language por
dc.rights.driver.fl_str_mv Attribution-NonCommercial-NoDerivatives 4.0 International
http://creativecommons.org/licenses/by-nc-nd/4.0/
info:eu-repo/semantics/openAccess
rights_invalid_str_mv Attribution-NonCommercial-NoDerivatives 4.0 International
http://creativecommons.org/licenses/by-nc-nd/4.0/
eu_rights_str_mv openAccess
dc.format.none.fl_str_mv application/pdf
dc.publisher.none.fl_str_mv Universidade Federal de Santa Maria
Brasil
Bioquímica
UFSM
Programa de Pós-Graduação em Ciências Biológicas: Bioquímica Toxicológica
Centro de Ciências Naturais e Exatas
publisher.none.fl_str_mv Universidade Federal de Santa Maria
Brasil
Bioquímica
UFSM
Programa de Pós-Graduação em Ciências Biológicas: Bioquímica Toxicológica
Centro de Ciências Naturais e Exatas
dc.source.none.fl_str_mv reponame:Manancial - Repositório Digital da UFSM
instname:Universidade Federal de Santa Maria (UFSM)
instacron:UFSM
instname_str Universidade Federal de Santa Maria (UFSM)
instacron_str UFSM
institution UFSM
reponame_str Manancial - Repositório Digital da UFSM
collection Manancial - Repositório Digital da UFSM
repository.name.fl_str_mv Manancial - Repositório Digital da UFSM - Universidade Federal de Santa Maria (UFSM)
repository.mail.fl_str_mv atendimento.sib@ufsm.br||tedebc@gmail.com
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