A novel mycovirus associated to Alternaria alternata comprises a distinct lineage in Partitiviridae

Detalhes bibliográficos
Autor(a) principal: Xavier, André da Silva
Data de Publicação: 2018
Outros Autores: Barros, Ana Paula Oliveira de, Godinho, Márcio Tadeu, Zerbini, Francisco Murilo, Souza, Flávia de Oliveira, Bruckner, Fernanda Prieto, Alfenas-Zerbini, Poliane
Tipo de documento: Artigo
Idioma: eng
Título da fonte: LOCUS Repositório Institucional da UFV
Texto Completo: https://doi.org/10.1016/j.virusres.2017.10.007
http://www.locus.ufv.br/handle/123456789/19927
Resumo: In the present work, we report a novel mycovirus that infects Alternaria alternata. The mycovirus has isometric particles of approximately 30 nm and the genome consists of two molecules of dsRNA, dsRNA1 with 1833 bp, encoding a putative RNA-dependent RNA polymerase (RdRp) and dsRNA2, with 1680 bp in length, encoding the putative capsid protein (CP). RdRp analysis revealed low amino acid identity with RdRps with species in the genus Gammapartitivirus, and the alignment of the RdRp revealed all the six conserved motifs present in members of Partitiviridae. The putative coat protein (CP) analysis revealed similarity with the putative CP of Botryosphaeria dothidea partitivirus 1 (BdPV1), a divergent partitivirus. We propose that Alternaria alternata partitivirus 1 (AtPV1) is a novel species and comprises a distinct lineage related to genus Gammapartitivirus in the family Partitiviridae, apparently on the threshold of radiation of a new genus, together with BdPV1. Vertical transmission tests showed that AtPV1 was transmitted to 100% conidial progeny and standard curing was unable to eliminate it from the host, characterizing it as a persistent virus. The absence of a virus-free isogenic lineage prevented us from accessing the details of the interaction between AtPV1 and A. alternata. Therefore, it remains unclear whether the morphological plasticity observed or the inability of the A. alternata isolate AVi1 to cause disease in plants is associated with AtPV1 infection.
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spelling Xavier, André da SilvaBarros, Ana Paula Oliveira deGodinho, Márcio TadeuZerbini, Francisco MuriloSouza, Flávia de OliveiraBruckner, Fernanda PrietoAlfenas-Zerbini, Poliane2018-06-05T11:05:29Z2018-06-05T11:05:29Z2018-01-1501681702https://doi.org/10.1016/j.virusres.2017.10.007http://www.locus.ufv.br/handle/123456789/19927In the present work, we report a novel mycovirus that infects Alternaria alternata. The mycovirus has isometric particles of approximately 30 nm and the genome consists of two molecules of dsRNA, dsRNA1 with 1833 bp, encoding a putative RNA-dependent RNA polymerase (RdRp) and dsRNA2, with 1680 bp in length, encoding the putative capsid protein (CP). RdRp analysis revealed low amino acid identity with RdRps with species in the genus Gammapartitivirus, and the alignment of the RdRp revealed all the six conserved motifs present in members of Partitiviridae. The putative coat protein (CP) analysis revealed similarity with the putative CP of Botryosphaeria dothidea partitivirus 1 (BdPV1), a divergent partitivirus. We propose that Alternaria alternata partitivirus 1 (AtPV1) is a novel species and comprises a distinct lineage related to genus Gammapartitivirus in the family Partitiviridae, apparently on the threshold of radiation of a new genus, together with BdPV1. Vertical transmission tests showed that AtPV1 was transmitted to 100% conidial progeny and standard curing was unable to eliminate it from the host, characterizing it as a persistent virus. The absence of a virus-free isogenic lineage prevented us from accessing the details of the interaction between AtPV1 and A. alternata. Therefore, it remains unclear whether the morphological plasticity observed or the inability of the A. alternata isolate AVi1 to cause disease in plants is associated with AtPV1 infection.engVirus Researchv. 244, p. 21-26, Janeiro 2018Elsevier B.V.info:eu-repo/semantics/openAccessDivergent virusesFungal phenotypic plasticityA novel mycovirus associated to Alternaria alternata comprises a distinct lineage in Partitiviridaeinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articleapplication/pdfreponame:LOCUS Repositório Institucional da UFVinstname:Universidade Federal de Viçosa (UFV)instacron:UFVORIGINALartigo.pdfartigo.pdftexto completoapplication/pdf758050https://locus.ufv.br//bitstream/123456789/19927/1/artigo.pdfc7a1067c2d75edafed9d967bba6ad7d5MD51LICENSElicense.txtlicense.txttext/plain; charset=utf-81748https://locus.ufv.br//bitstream/123456789/19927/2/license.txt8a4605be74aa9ea9d79846c1fba20a33MD52THUMBNAILartigo.pdf.jpgartigo.pdf.jpgIM Thumbnailimage/jpeg5934https://locus.ufv.br//bitstream/123456789/19927/3/artigo.pdf.jpg0e48b27169b0de00847fd6b1eb6c1233MD53123456789/199272018-06-05 23:00:23.19oai:locus.ufv.br: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Repositório InstitucionalPUBhttps://www.locus.ufv.br/oai/requestfabiojreis@ufv.bropendoar:21452018-06-06T02:00:23LOCUS Repositório Institucional da UFV - Universidade Federal de Viçosa (UFV)false
dc.title.en.fl_str_mv A novel mycovirus associated to Alternaria alternata comprises a distinct lineage in Partitiviridae
title A novel mycovirus associated to Alternaria alternata comprises a distinct lineage in Partitiviridae
spellingShingle A novel mycovirus associated to Alternaria alternata comprises a distinct lineage in Partitiviridae
Xavier, André da Silva
Divergent viruses
Fungal phenotypic plasticity
title_short A novel mycovirus associated to Alternaria alternata comprises a distinct lineage in Partitiviridae
title_full A novel mycovirus associated to Alternaria alternata comprises a distinct lineage in Partitiviridae
title_fullStr A novel mycovirus associated to Alternaria alternata comprises a distinct lineage in Partitiviridae
title_full_unstemmed A novel mycovirus associated to Alternaria alternata comprises a distinct lineage in Partitiviridae
title_sort A novel mycovirus associated to Alternaria alternata comprises a distinct lineage in Partitiviridae
author Xavier, André da Silva
author_facet Xavier, André da Silva
Barros, Ana Paula Oliveira de
Godinho, Márcio Tadeu
Zerbini, Francisco Murilo
Souza, Flávia de Oliveira
Bruckner, Fernanda Prieto
Alfenas-Zerbini, Poliane
author_role author
author2 Barros, Ana Paula Oliveira de
Godinho, Márcio Tadeu
Zerbini, Francisco Murilo
Souza, Flávia de Oliveira
Bruckner, Fernanda Prieto
Alfenas-Zerbini, Poliane
author2_role author
author
author
author
author
author
dc.contributor.author.fl_str_mv Xavier, André da Silva
Barros, Ana Paula Oliveira de
Godinho, Márcio Tadeu
Zerbini, Francisco Murilo
Souza, Flávia de Oliveira
Bruckner, Fernanda Prieto
Alfenas-Zerbini, Poliane
dc.subject.pt-BR.fl_str_mv Divergent viruses
Fungal phenotypic plasticity
topic Divergent viruses
Fungal phenotypic plasticity
description In the present work, we report a novel mycovirus that infects Alternaria alternata. The mycovirus has isometric particles of approximately 30 nm and the genome consists of two molecules of dsRNA, dsRNA1 with 1833 bp, encoding a putative RNA-dependent RNA polymerase (RdRp) and dsRNA2, with 1680 bp in length, encoding the putative capsid protein (CP). RdRp analysis revealed low amino acid identity with RdRps with species in the genus Gammapartitivirus, and the alignment of the RdRp revealed all the six conserved motifs present in members of Partitiviridae. The putative coat protein (CP) analysis revealed similarity with the putative CP of Botryosphaeria dothidea partitivirus 1 (BdPV1), a divergent partitivirus. We propose that Alternaria alternata partitivirus 1 (AtPV1) is a novel species and comprises a distinct lineage related to genus Gammapartitivirus in the family Partitiviridae, apparently on the threshold of radiation of a new genus, together with BdPV1. Vertical transmission tests showed that AtPV1 was transmitted to 100% conidial progeny and standard curing was unable to eliminate it from the host, characterizing it as a persistent virus. The absence of a virus-free isogenic lineage prevented us from accessing the details of the interaction between AtPV1 and A. alternata. Therefore, it remains unclear whether the morphological plasticity observed or the inability of the A. alternata isolate AVi1 to cause disease in plants is associated with AtPV1 infection.
publishDate 2018
dc.date.accessioned.fl_str_mv 2018-06-05T11:05:29Z
dc.date.available.fl_str_mv 2018-06-05T11:05:29Z
dc.date.issued.fl_str_mv 2018-01-15
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
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dc.identifier.uri.fl_str_mv https://doi.org/10.1016/j.virusres.2017.10.007
http://www.locus.ufv.br/handle/123456789/19927
dc.identifier.issn.none.fl_str_mv 01681702
identifier_str_mv 01681702
url https://doi.org/10.1016/j.virusres.2017.10.007
http://www.locus.ufv.br/handle/123456789/19927
dc.language.iso.fl_str_mv eng
language eng
dc.relation.ispartofseries.pt-BR.fl_str_mv v. 244, p. 21-26, Janeiro 2018
dc.rights.driver.fl_str_mv Elsevier B.V.
info:eu-repo/semantics/openAccess
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