Dengue virus surveillance: Detection of DENV-4 in the city of Sao Jose do Rio Preto, SP, Brazil

Detalhes bibliográficos
Autor(a) principal: Colombo, Tatiana Elias
Data de Publicação: 2016
Outros Autores: Vedovello, Danila, Pacca-Mazaro, Carolina Colombelli, Mondini, Adriano, Araujo, Joao Pessoa [UNESP], Cabrera, Eliana, Lopes, Jose Carlos, Penha dos Santos, Izalco Nuremberg, Negri Reis, Andreia Francesli, Costa, Fabiana Rodrigues, Arao Antonio Cruz, Lilian Elisa, Ferreira, Jurandir, Oliveira Rocha, Eliseu Soares de, Kroon, Erna Geessien, Morais Bronzoni, Roberta Vieira de, Vasilakis, Nikos, Nogueira, Mauricio Lacerda
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Institucional da UNESP
Texto Completo: http://dx.doi.org/10.1016/j.actatropica.2016.09.004
http://hdl.handle.net/11449/159229
Resumo: Dengue viruses are the most common arbovirus infection worldwide and are caused by four distinct serotypes of the dengue virus (DENV). In the present study, we assessed DENV transmission in Sao Jose do Rio Preto (SJRP) from 2010 to 2014. We analyzed blood samples from febrile patients who were attended at health care centers in SJRP. DENV detection was performed using multiplex RT-PCR, using flavivirus generic primers, based on the genes of the non-structural protein (NS5), followed by nestedPCR assay with species-specific primers. We analyzed 1549 samples, of which 1389 were positive for NS1 by rapid test. One thousand and eight-seven samples (78%) were confirmed as positive by multiplex RTPCR: DENV-4, 48.5% (528/1087); DENV-1, 41.5% (449/1087); DENV-2, 9.5% (104/1087); and co-infection (5 DENV-1/DENV-4, 1 DENV-1/DENV-2), 0.5% (6/1087). Phylogenetic analysis of the DENV-4 grouped the isolates identified in this study with the American genotype and the showed a relationship between isolates from SJRP and isolates from the northern region of South America. Taken together, our data shows the detection and emergence of new dengue genotype in a new region and reiterate the importance of surveillance programs to detect and trace the evolution of DENV. (C) 2016 Elsevier B.V. All rights reserved.
id UNSP_2e1b9637ba857f640c13fcfe1cfbecc5
oai_identifier_str oai:repositorio.unesp.br:11449/159229
network_acronym_str UNSP
network_name_str Repositório Institucional da UNESP
repository_id_str 2946
spelling Dengue virus surveillance: Detection of DENV-4 in the city of Sao Jose do Rio Preto, SP, BrazilDengue virusTransmissionPhylogenetic analysisSurveillance programsDengue viruses are the most common arbovirus infection worldwide and are caused by four distinct serotypes of the dengue virus (DENV). In the present study, we assessed DENV transmission in Sao Jose do Rio Preto (SJRP) from 2010 to 2014. We analyzed blood samples from febrile patients who were attended at health care centers in SJRP. DENV detection was performed using multiplex RT-PCR, using flavivirus generic primers, based on the genes of the non-structural protein (NS5), followed by nestedPCR assay with species-specific primers. We analyzed 1549 samples, of which 1389 were positive for NS1 by rapid test. One thousand and eight-seven samples (78%) were confirmed as positive by multiplex RTPCR: DENV-4, 48.5% (528/1087); DENV-1, 41.5% (449/1087); DENV-2, 9.5% (104/1087); and co-infection (5 DENV-1/DENV-4, 1 DENV-1/DENV-2), 0.5% (6/1087). Phylogenetic analysis of the DENV-4 grouped the isolates identified in this study with the American genotype and the showed a relationship between isolates from SJRP and isolates from the northern region of South America. Taken together, our data shows the detection and emergence of new dengue genotype in a new region and reiterate the importance of surveillance programs to detect and trace the evolution of DENV. (C) 2016 Elsevier B.V. All rights reserved.PronexINCT-DengueFundação de Amparo à Pesquisa do Estado de São Paulo (FAPESP)Coordenação de Aperfeiçoamento de Pessoal de Nível Superior (CAPES)Fac Med Sao Jose do Rio Preto FAMERP, Sao Jose Do Rio Preto, SP, BrazilUniv Estadual Paulista, Inst Biociencias Botucatu, Lab Virol, Botucatu, SP, BrazilDept Vigilancia Saude, Prefeitura Sao Jose do Rio Preto, Sao Jose Do Rio Preto, SP, BrazilUniv Fed Minas Gerais, Dept Microbiol, Belo Horizonte, MG, BrazilUniv Fed Mato Grosso, Inst Ciencias Saude, Sinop, MT, BrazilUniv Texas Med Branch, Ctr Biodefense & Emerging Infect Dis, Ctr Trop Dis, Inst Human Infect & Immun, Galveston, TX 77555 USAUniv Texas Med Branch, Dept Pathol, Galveston, TX 77555 USAUniv Estadual Paulista, Inst Biociencias Botucatu, Lab Virol, Botucatu, SP, BrazilElsevier B.V.Universidade de São Paulo (USP)Universidade Estadual Paulista (Unesp)Dept Vigilancia SaudeUniversidade Federal de Minas Gerais (UFMG)Universidade Federal de Mato Grosso do Sul (UFMS)Univ Texas Med BranchColombo, Tatiana EliasVedovello, DanilaPacca-Mazaro, Carolina ColombelliMondini, AdrianoAraujo, Joao Pessoa [UNESP]Cabrera, ElianaLopes, Jose CarlosPenha dos Santos, Izalco NurembergNegri Reis, Andreia FrancesliCosta, Fabiana RodriguesArao Antonio Cruz, Lilian ElisaFerreira, JurandirOliveira Rocha, Eliseu Soares deKroon, Erna GeessienMorais Bronzoni, Roberta Vieira deVasilakis, NikosNogueira, Mauricio Lacerda2018-11-26T15:37:31Z2018-11-26T15:37:31Z2016-12-01info:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/article84-89application/pdfhttp://dx.doi.org/10.1016/j.actatropica.2016.09.004Acta Tropica. Amsterdam: Elsevier Science Bv, v. 164, p. 84-89, 2016.0001-706Xhttp://hdl.handle.net/11449/15922910.1016/j.actatropica.2016.09.004WOS:000389087700013WOS000389087700013.pdf58211426247203980000-0002-5557-9721Web of Sciencereponame:Repositório Institucional da UNESPinstname:Universidade Estadual Paulista (UNESP)instacron:UNESPengActa Tropicainfo:eu-repo/semantics/openAccess2023-12-05T06:22:44Zoai:repositorio.unesp.br:11449/159229Repositório InstitucionalPUBhttp://repositorio.unesp.br/oai/requestopendoar:29462024-08-05T19:35:10.191019Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP)false
dc.title.none.fl_str_mv Dengue virus surveillance: Detection of DENV-4 in the city of Sao Jose do Rio Preto, SP, Brazil
title Dengue virus surveillance: Detection of DENV-4 in the city of Sao Jose do Rio Preto, SP, Brazil
spellingShingle Dengue virus surveillance: Detection of DENV-4 in the city of Sao Jose do Rio Preto, SP, Brazil
Colombo, Tatiana Elias
Dengue virus
Transmission
Phylogenetic analysis
Surveillance programs
title_short Dengue virus surveillance: Detection of DENV-4 in the city of Sao Jose do Rio Preto, SP, Brazil
title_full Dengue virus surveillance: Detection of DENV-4 in the city of Sao Jose do Rio Preto, SP, Brazil
title_fullStr Dengue virus surveillance: Detection of DENV-4 in the city of Sao Jose do Rio Preto, SP, Brazil
title_full_unstemmed Dengue virus surveillance: Detection of DENV-4 in the city of Sao Jose do Rio Preto, SP, Brazil
title_sort Dengue virus surveillance: Detection of DENV-4 in the city of Sao Jose do Rio Preto, SP, Brazil
author Colombo, Tatiana Elias
author_facet Colombo, Tatiana Elias
Vedovello, Danila
Pacca-Mazaro, Carolina Colombelli
Mondini, Adriano
Araujo, Joao Pessoa [UNESP]
Cabrera, Eliana
Lopes, Jose Carlos
Penha dos Santos, Izalco Nuremberg
Negri Reis, Andreia Francesli
Costa, Fabiana Rodrigues
Arao Antonio Cruz, Lilian Elisa
Ferreira, Jurandir
Oliveira Rocha, Eliseu Soares de
Kroon, Erna Geessien
Morais Bronzoni, Roberta Vieira de
Vasilakis, Nikos
Nogueira, Mauricio Lacerda
author_role author
author2 Vedovello, Danila
Pacca-Mazaro, Carolina Colombelli
Mondini, Adriano
Araujo, Joao Pessoa [UNESP]
Cabrera, Eliana
Lopes, Jose Carlos
Penha dos Santos, Izalco Nuremberg
Negri Reis, Andreia Francesli
Costa, Fabiana Rodrigues
Arao Antonio Cruz, Lilian Elisa
Ferreira, Jurandir
Oliveira Rocha, Eliseu Soares de
Kroon, Erna Geessien
Morais Bronzoni, Roberta Vieira de
Vasilakis, Nikos
Nogueira, Mauricio Lacerda
author2_role author
author
author
author
author
author
author
author
author
author
author
author
author
author
author
author
dc.contributor.none.fl_str_mv Universidade de São Paulo (USP)
Universidade Estadual Paulista (Unesp)
Dept Vigilancia Saude
Universidade Federal de Minas Gerais (UFMG)
Universidade Federal de Mato Grosso do Sul (UFMS)
Univ Texas Med Branch
dc.contributor.author.fl_str_mv Colombo, Tatiana Elias
Vedovello, Danila
Pacca-Mazaro, Carolina Colombelli
Mondini, Adriano
Araujo, Joao Pessoa [UNESP]
Cabrera, Eliana
Lopes, Jose Carlos
Penha dos Santos, Izalco Nuremberg
Negri Reis, Andreia Francesli
Costa, Fabiana Rodrigues
Arao Antonio Cruz, Lilian Elisa
Ferreira, Jurandir
Oliveira Rocha, Eliseu Soares de
Kroon, Erna Geessien
Morais Bronzoni, Roberta Vieira de
Vasilakis, Nikos
Nogueira, Mauricio Lacerda
dc.subject.por.fl_str_mv Dengue virus
Transmission
Phylogenetic analysis
Surveillance programs
topic Dengue virus
Transmission
Phylogenetic analysis
Surveillance programs
description Dengue viruses are the most common arbovirus infection worldwide and are caused by four distinct serotypes of the dengue virus (DENV). In the present study, we assessed DENV transmission in Sao Jose do Rio Preto (SJRP) from 2010 to 2014. We analyzed blood samples from febrile patients who were attended at health care centers in SJRP. DENV detection was performed using multiplex RT-PCR, using flavivirus generic primers, based on the genes of the non-structural protein (NS5), followed by nestedPCR assay with species-specific primers. We analyzed 1549 samples, of which 1389 were positive for NS1 by rapid test. One thousand and eight-seven samples (78%) were confirmed as positive by multiplex RTPCR: DENV-4, 48.5% (528/1087); DENV-1, 41.5% (449/1087); DENV-2, 9.5% (104/1087); and co-infection (5 DENV-1/DENV-4, 1 DENV-1/DENV-2), 0.5% (6/1087). Phylogenetic analysis of the DENV-4 grouped the isolates identified in this study with the American genotype and the showed a relationship between isolates from SJRP and isolates from the northern region of South America. Taken together, our data shows the detection and emergence of new dengue genotype in a new region and reiterate the importance of surveillance programs to detect and trace the evolution of DENV. (C) 2016 Elsevier B.V. All rights reserved.
publishDate 2016
dc.date.none.fl_str_mv 2016-12-01
2018-11-26T15:37:31Z
2018-11-26T15:37:31Z
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv http://dx.doi.org/10.1016/j.actatropica.2016.09.004
Acta Tropica. Amsterdam: Elsevier Science Bv, v. 164, p. 84-89, 2016.
0001-706X
http://hdl.handle.net/11449/159229
10.1016/j.actatropica.2016.09.004
WOS:000389087700013
WOS000389087700013.pdf
5821142624720398
0000-0002-5557-9721
url http://dx.doi.org/10.1016/j.actatropica.2016.09.004
http://hdl.handle.net/11449/159229
identifier_str_mv Acta Tropica. Amsterdam: Elsevier Science Bv, v. 164, p. 84-89, 2016.
0001-706X
10.1016/j.actatropica.2016.09.004
WOS:000389087700013
WOS000389087700013.pdf
5821142624720398
0000-0002-5557-9721
dc.language.iso.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv Acta Tropica
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
eu_rights_str_mv openAccess
dc.format.none.fl_str_mv 84-89
application/pdf
dc.publisher.none.fl_str_mv Elsevier B.V.
publisher.none.fl_str_mv Elsevier B.V.
dc.source.none.fl_str_mv Web of Science
reponame:Repositório Institucional da UNESP
instname:Universidade Estadual Paulista (UNESP)
instacron:UNESP
instname_str Universidade Estadual Paulista (UNESP)
instacron_str UNESP
institution UNESP
reponame_str Repositório Institucional da UNESP
collection Repositório Institucional da UNESP
repository.name.fl_str_mv Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP)
repository.mail.fl_str_mv
_version_ 1808129090042986496