Binding investigation between M2-1protein from hRSV and acetylated quercetin derivatives: 1H NMR, fluorescence spectroscopy, and molecular docking
Autor(a) principal: | |
---|---|
Data de Publicação: | 2018 |
Outros Autores: | , , , , , , , |
Tipo de documento: | Artigo |
Idioma: | eng |
Título da fonte: | Repositório Institucional da UNESP |
Texto Completo: | http://dx.doi.org/10.1016/j.ijbiomac.2017.12.141 http://hdl.handle.net/11449/175721 |
Resumo: | The human Respiratory Syncytial Virus (hRSV) is the main responsible for occurrences of respiratory diseases as pneumonia and bronchiolitis in children and elderly. M2-1 protein from hRSV is an important antitermination factor for transcription process that prevents the premature dissociation of the polymerase complex, making it a potential target for developing of inhibitors of the viral replication. The present study reports the interaction of the M2-1 tetramer with pera (Q1) and tetracetylated (Q2) quercetin derivatives, which were synthesized with the objective of generating stronger bioactive compounds against oxidation process. Fluorescence experiments showed binding constants of the M2-1/compounds complexes on order of 104 M− 1 with one ligand per monomeric unit, being the affinity of Q2 stronger than Q1. The thermodynamic analysis revealed values of ΔH > 0 and ΔS > 0, suggesting that hydrophobic interactions play a key role in the formation of the complexes. Molecular docking calculations indicated that binding sites for the compounds are in contact interfaces between globular and zinc finger domains of the monomers and that hydrogen bonds and stacking interactions are important contributions for stabilization of the complexes. Thus, the interaction of the acetylated quercetin derivatives in the RNA-binding sites of M2-1 makes these potential candidates for viral replication inhibitors. |
id |
UNSP_3838b386ed4b60ea564da6d264524257 |
---|---|
oai_identifier_str |
oai:repositorio.unesp.br:11449/175721 |
network_acronym_str |
UNSP |
network_name_str |
Repositório Institucional da UNESP |
repository_id_str |
2946 |
spelling |
Binding investigation between M2-1protein from hRSV and acetylated quercetin derivatives: 1H NMR, fluorescence spectroscopy, and molecular docking1H RMNAcetylated quercetin derivativesFluorescence spectroscopyhRSVM2-1Molecular dockingThe human Respiratory Syncytial Virus (hRSV) is the main responsible for occurrences of respiratory diseases as pneumonia and bronchiolitis in children and elderly. M2-1 protein from hRSV is an important antitermination factor for transcription process that prevents the premature dissociation of the polymerase complex, making it a potential target for developing of inhibitors of the viral replication. The present study reports the interaction of the M2-1 tetramer with pera (Q1) and tetracetylated (Q2) quercetin derivatives, which were synthesized with the objective of generating stronger bioactive compounds against oxidation process. Fluorescence experiments showed binding constants of the M2-1/compounds complexes on order of 104 M− 1 with one ligand per monomeric unit, being the affinity of Q2 stronger than Q1. The thermodynamic analysis revealed values of ΔH > 0 and ΔS > 0, suggesting that hydrophobic interactions play a key role in the formation of the complexes. Molecular docking calculations indicated that binding sites for the compounds are in contact interfaces between globular and zinc finger domains of the monomers and that hydrogen bonds and stacking interactions are important contributions for stabilization of the complexes. Thus, the interaction of the acetylated quercetin derivatives in the RNA-binding sites of M2-1 makes these potential candidates for viral replication inhibitors.Instituto de Biociências Letras e Ciências Exatas UNESP Department of BiologyInstituto de Biociências Letras e Ciências Exatas UNESP Multiuser Center for Biomolecular Innovation Laboratory of Molecular BiologyInstituto de Biociências Letras e Ciências Exatas UNESP Department of PhysicsInstituto de Biociências Letras e Ciências Exatas UNESP Department of Chemistry and Environmental SciencesInstituto de Biociências Letras e Ciências Exatas UNESP Department of BiologyInstituto de Biociências Letras e Ciências Exatas UNESP Multiuser Center for Biomolecular Innovation Laboratory of Molecular BiologyInstituto de Biociências Letras e Ciências Exatas UNESP Department of PhysicsInstituto de Biociências Letras e Ciências Exatas UNESP Department of Chemistry and Environmental SciencesUniversidade Estadual Paulista (Unesp)Guimarães, Giovana C. [UNESP]Piva, Hemily R.M. [UNESP]Araújo, Gabriela C. [UNESP]Lima, Caroline S. [UNESP]Regasini, Luis O. [UNESP]de Melo, Fernando A. [UNESP]Fossey, Marcelo A. [UNESP]Caruso, Ícaro P. [UNESP]Souza, Fátima P. [UNESP]2018-12-11T17:17:14Z2018-12-11T17:17:14Z2018-05-01info:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/article33-38application/pdfhttp://dx.doi.org/10.1016/j.ijbiomac.2017.12.141International Journal of Biological Macromolecules, v. 111, p. 33-38.1879-00030141-8130http://hdl.handle.net/11449/17572110.1016/j.ijbiomac.2017.12.1412-s2.0-850400282912-s2.0-85040028291.pdfScopusreponame:Repositório Institucional da UNESPinstname:Universidade Estadual Paulista (UNESP)instacron:UNESPengInternational Journal of Biological Macromolecules0,917info:eu-repo/semantics/openAccess2023-12-16T06:20:01Zoai:repositorio.unesp.br:11449/175721Repositório InstitucionalPUBhttp://repositorio.unesp.br/oai/requestopendoar:29462024-08-05T20:29:10.810626Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP)false |
dc.title.none.fl_str_mv |
Binding investigation between M2-1protein from hRSV and acetylated quercetin derivatives: 1H NMR, fluorescence spectroscopy, and molecular docking |
title |
Binding investigation between M2-1protein from hRSV and acetylated quercetin derivatives: 1H NMR, fluorescence spectroscopy, and molecular docking |
spellingShingle |
Binding investigation between M2-1protein from hRSV and acetylated quercetin derivatives: 1H NMR, fluorescence spectroscopy, and molecular docking Guimarães, Giovana C. [UNESP] 1H RMN Acetylated quercetin derivatives Fluorescence spectroscopy hRSV M2-1 Molecular docking |
title_short |
Binding investigation between M2-1protein from hRSV and acetylated quercetin derivatives: 1H NMR, fluorescence spectroscopy, and molecular docking |
title_full |
Binding investigation between M2-1protein from hRSV and acetylated quercetin derivatives: 1H NMR, fluorescence spectroscopy, and molecular docking |
title_fullStr |
Binding investigation between M2-1protein from hRSV and acetylated quercetin derivatives: 1H NMR, fluorescence spectroscopy, and molecular docking |
title_full_unstemmed |
Binding investigation between M2-1protein from hRSV and acetylated quercetin derivatives: 1H NMR, fluorescence spectroscopy, and molecular docking |
title_sort |
Binding investigation between M2-1protein from hRSV and acetylated quercetin derivatives: 1H NMR, fluorescence spectroscopy, and molecular docking |
author |
Guimarães, Giovana C. [UNESP] |
author_facet |
Guimarães, Giovana C. [UNESP] Piva, Hemily R.M. [UNESP] Araújo, Gabriela C. [UNESP] Lima, Caroline S. [UNESP] Regasini, Luis O. [UNESP] de Melo, Fernando A. [UNESP] Fossey, Marcelo A. [UNESP] Caruso, Ícaro P. [UNESP] Souza, Fátima P. [UNESP] |
author_role |
author |
author2 |
Piva, Hemily R.M. [UNESP] Araújo, Gabriela C. [UNESP] Lima, Caroline S. [UNESP] Regasini, Luis O. [UNESP] de Melo, Fernando A. [UNESP] Fossey, Marcelo A. [UNESP] Caruso, Ícaro P. [UNESP] Souza, Fátima P. [UNESP] |
author2_role |
author author author author author author author author |
dc.contributor.none.fl_str_mv |
Universidade Estadual Paulista (Unesp) |
dc.contributor.author.fl_str_mv |
Guimarães, Giovana C. [UNESP] Piva, Hemily R.M. [UNESP] Araújo, Gabriela C. [UNESP] Lima, Caroline S. [UNESP] Regasini, Luis O. [UNESP] de Melo, Fernando A. [UNESP] Fossey, Marcelo A. [UNESP] Caruso, Ícaro P. [UNESP] Souza, Fátima P. [UNESP] |
dc.subject.por.fl_str_mv |
1H RMN Acetylated quercetin derivatives Fluorescence spectroscopy hRSV M2-1 Molecular docking |
topic |
1H RMN Acetylated quercetin derivatives Fluorescence spectroscopy hRSV M2-1 Molecular docking |
description |
The human Respiratory Syncytial Virus (hRSV) is the main responsible for occurrences of respiratory diseases as pneumonia and bronchiolitis in children and elderly. M2-1 protein from hRSV is an important antitermination factor for transcription process that prevents the premature dissociation of the polymerase complex, making it a potential target for developing of inhibitors of the viral replication. The present study reports the interaction of the M2-1 tetramer with pera (Q1) and tetracetylated (Q2) quercetin derivatives, which were synthesized with the objective of generating stronger bioactive compounds against oxidation process. Fluorescence experiments showed binding constants of the M2-1/compounds complexes on order of 104 M− 1 with one ligand per monomeric unit, being the affinity of Q2 stronger than Q1. The thermodynamic analysis revealed values of ΔH > 0 and ΔS > 0, suggesting that hydrophobic interactions play a key role in the formation of the complexes. Molecular docking calculations indicated that binding sites for the compounds are in contact interfaces between globular and zinc finger domains of the monomers and that hydrogen bonds and stacking interactions are important contributions for stabilization of the complexes. Thus, the interaction of the acetylated quercetin derivatives in the RNA-binding sites of M2-1 makes these potential candidates for viral replication inhibitors. |
publishDate |
2018 |
dc.date.none.fl_str_mv |
2018-12-11T17:17:14Z 2018-12-11T17:17:14Z 2018-05-01 |
dc.type.status.fl_str_mv |
info:eu-repo/semantics/publishedVersion |
dc.type.driver.fl_str_mv |
info:eu-repo/semantics/article |
format |
article |
status_str |
publishedVersion |
dc.identifier.uri.fl_str_mv |
http://dx.doi.org/10.1016/j.ijbiomac.2017.12.141 International Journal of Biological Macromolecules, v. 111, p. 33-38. 1879-0003 0141-8130 http://hdl.handle.net/11449/175721 10.1016/j.ijbiomac.2017.12.141 2-s2.0-85040028291 2-s2.0-85040028291.pdf |
url |
http://dx.doi.org/10.1016/j.ijbiomac.2017.12.141 http://hdl.handle.net/11449/175721 |
identifier_str_mv |
International Journal of Biological Macromolecules, v. 111, p. 33-38. 1879-0003 0141-8130 10.1016/j.ijbiomac.2017.12.141 2-s2.0-85040028291 2-s2.0-85040028291.pdf |
dc.language.iso.fl_str_mv |
eng |
language |
eng |
dc.relation.none.fl_str_mv |
International Journal of Biological Macromolecules 0,917 |
dc.rights.driver.fl_str_mv |
info:eu-repo/semantics/openAccess |
eu_rights_str_mv |
openAccess |
dc.format.none.fl_str_mv |
33-38 application/pdf |
dc.source.none.fl_str_mv |
Scopus reponame:Repositório Institucional da UNESP instname:Universidade Estadual Paulista (UNESP) instacron:UNESP |
instname_str |
Universidade Estadual Paulista (UNESP) |
instacron_str |
UNESP |
institution |
UNESP |
reponame_str |
Repositório Institucional da UNESP |
collection |
Repositório Institucional da UNESP |
repository.name.fl_str_mv |
Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP) |
repository.mail.fl_str_mv |
|
_version_ |
1808129208432459776 |