Absence of significant genetic alterations in the VSX1, SOD1, TIMP3, and LOX genes in Brazilian patients with Keratoconus

Detalhes bibliográficos
Autor(a) principal: Lopes, Alessandro Garcia [UNESP]
Data de Publicação: 2021
Outros Autores: de Almeida Jr, Gildásio Castello, Miola, Marcos Paulo, Teixeira, Ronan Marques [UNESP], Pires, Francielly Camilla Bazilio Laurindo, Miani, Rodolfo Andrade, de Mattos, Luiz Carlos, Brandão, Cinara Cássia, Castiglioni, Lilian [UNESP]
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Institucional da UNESP
Texto Completo: http://dx.doi.org/10.1080/13816810.2021.1992785
http://hdl.handle.net/11449/229938
Resumo: Purpose: To identify inherited or acquired mutations in the VSX1, SOD1, TIMP3 and LOX genes from the combined analysis of corneal and blood samples from patients with Keratoconus. Methods: The casuistry was consisted of samples of peripheral blood and corneal epithelium from 35 unrelated patients with Keratoconus who were submitted to corneal crosslink treatment. Also, blood and corneal epithelium samples from 89 non-keratoconic patients were used to compose the control group. Ophthalmologic evaluations included a clinical examination, topography and tomography. DNA samples were extracted from peripheral blood and from corneal epithelium in both groups and all coding regions of the VSX1, SOD1, TIMP3 and LOX genes were amplified by polymerase chain reaction, denatured and subjected to polyacrylamide gel electrophoresis. Mutational screening was performed by single-strand conformation polymorphism and direct DNA sequencing. Results: No pathogenic variant was found in all coding regions of VSX1, SOD1, TIMP3 and LOX genes, we detected only few SNPs (single-nucleotide polymorphisms). Among the polymorphisms stand out three of them, corresponding to the synonymous exchange of amino acids: exon 3 of VSX1 Ala182Ala and exon 3 of TIMP3 His83His and Ser87Ser; in patients with Keratoconus and also in control subjects. All the polymorphisms were found in samples of corneal epithelium and corresponding blood. Conclusion: There is absence of KC pathogenic related to mutations in the VSX1, SOD1, TIMP3 and LOX genes in the studied patients.
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spelling Absence of significant genetic alterations in the VSX1, SOD1, TIMP3, and LOX genes in Brazilian patients with KeratoconusCorneaectasiagenetic polymorphismsKeratoconuslysyl oxidase genesuperoxide dismutase 1 geneTIMP3 genevisual system homeobox 1 genePurpose: To identify inherited or acquired mutations in the VSX1, SOD1, TIMP3 and LOX genes from the combined analysis of corneal and blood samples from patients with Keratoconus. Methods: The casuistry was consisted of samples of peripheral blood and corneal epithelium from 35 unrelated patients with Keratoconus who were submitted to corneal crosslink treatment. Also, blood and corneal epithelium samples from 89 non-keratoconic patients were used to compose the control group. Ophthalmologic evaluations included a clinical examination, topography and tomography. DNA samples were extracted from peripheral blood and from corneal epithelium in both groups and all coding regions of the VSX1, SOD1, TIMP3 and LOX genes were amplified by polymerase chain reaction, denatured and subjected to polyacrylamide gel electrophoresis. Mutational screening was performed by single-strand conformation polymorphism and direct DNA sequencing. Results: No pathogenic variant was found in all coding regions of VSX1, SOD1, TIMP3 and LOX genes, we detected only few SNPs (single-nucleotide polymorphisms). Among the polymorphisms stand out three of them, corresponding to the synonymous exchange of amino acids: exon 3 of VSX1 Ala182Ala and exon 3 of TIMP3 His83His and Ser87Ser; in patients with Keratoconus and also in control subjects. All the polymorphisms were found in samples of corneal epithelium and corresponding blood. Conclusion: There is absence of KC pathogenic related to mutations in the VSX1, SOD1, TIMP3 and LOX genes in the studied patients.Biology Department Instituto De Biociências Letras E Universidade Estadual Paulista “Júlio De Mesquita Filho” São José do Rio PretoImmunogenetics Laboratory Molecular Biology Department Faculdade De Medicina De São José Do Rio Preto (FAMERP) São José do Rio PretoOphthalmology Outpatient Clinic Hospital De Base Da Fundação Faculdade Regional De Medicina, HB-, São José do Rio PretoCentro Universitário De Rio Preto UnirpEpidemiology and Collective Health Faculdade De Medicina De São José Do Rio Preto (FAMERP) São José do Rio PretoBiology Department Instituto De Biociências Letras E Universidade Estadual Paulista “Júlio De Mesquita Filho” São José do Rio PretoUniversidade Estadual Paulista (UNESP)São José do Rio PretoHospital De Base Da Fundação Faculdade Regional De MedicinaCentro Universitário De Rio Preto UnirpLopes, Alessandro Garcia [UNESP]de Almeida Jr, Gildásio CastelloMiola, Marcos PauloTeixeira, Ronan Marques [UNESP]Pires, Francielly Camilla Bazilio LaurindoMiani, Rodolfo Andradede Mattos, Luiz CarlosBrandão, Cinara CássiaCastiglioni, Lilian [UNESP]2022-04-29T08:36:44Z2022-04-29T08:36:44Z2021-01-01info:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articlehttp://dx.doi.org/10.1080/13816810.2021.1992785Ophthalmic Genetics.1744-50941381-6810http://hdl.handle.net/11449/22993810.1080/13816810.2021.19927852-s2.0-85119681084Scopusreponame:Repositório Institucional da UNESPinstname:Universidade Estadual Paulista (UNESP)instacron:UNESPengOphthalmic Geneticsinfo:eu-repo/semantics/openAccess2022-04-29T08:36:44Zoai:repositorio.unesp.br:11449/229938Repositório InstitucionalPUBhttp://repositorio.unesp.br/oai/requestopendoar:29462024-08-05T19:36:36.106801Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP)false
dc.title.none.fl_str_mv Absence of significant genetic alterations in the VSX1, SOD1, TIMP3, and LOX genes in Brazilian patients with Keratoconus
title Absence of significant genetic alterations in the VSX1, SOD1, TIMP3, and LOX genes in Brazilian patients with Keratoconus
spellingShingle Absence of significant genetic alterations in the VSX1, SOD1, TIMP3, and LOX genes in Brazilian patients with Keratoconus
Lopes, Alessandro Garcia [UNESP]
Cornea
ectasia
genetic polymorphisms
Keratoconus
lysyl oxidase gene
superoxide dismutase 1 gene
TIMP3 gene
visual system homeobox 1 gene
title_short Absence of significant genetic alterations in the VSX1, SOD1, TIMP3, and LOX genes in Brazilian patients with Keratoconus
title_full Absence of significant genetic alterations in the VSX1, SOD1, TIMP3, and LOX genes in Brazilian patients with Keratoconus
title_fullStr Absence of significant genetic alterations in the VSX1, SOD1, TIMP3, and LOX genes in Brazilian patients with Keratoconus
title_full_unstemmed Absence of significant genetic alterations in the VSX1, SOD1, TIMP3, and LOX genes in Brazilian patients with Keratoconus
title_sort Absence of significant genetic alterations in the VSX1, SOD1, TIMP3, and LOX genes in Brazilian patients with Keratoconus
author Lopes, Alessandro Garcia [UNESP]
author_facet Lopes, Alessandro Garcia [UNESP]
de Almeida Jr, Gildásio Castello
Miola, Marcos Paulo
Teixeira, Ronan Marques [UNESP]
Pires, Francielly Camilla Bazilio Laurindo
Miani, Rodolfo Andrade
de Mattos, Luiz Carlos
Brandão, Cinara Cássia
Castiglioni, Lilian [UNESP]
author_role author
author2 de Almeida Jr, Gildásio Castello
Miola, Marcos Paulo
Teixeira, Ronan Marques [UNESP]
Pires, Francielly Camilla Bazilio Laurindo
Miani, Rodolfo Andrade
de Mattos, Luiz Carlos
Brandão, Cinara Cássia
Castiglioni, Lilian [UNESP]
author2_role author
author
author
author
author
author
author
author
dc.contributor.none.fl_str_mv Universidade Estadual Paulista (UNESP)
São José do Rio Preto
Hospital De Base Da Fundação Faculdade Regional De Medicina
Centro Universitário De Rio Preto Unirp
dc.contributor.author.fl_str_mv Lopes, Alessandro Garcia [UNESP]
de Almeida Jr, Gildásio Castello
Miola, Marcos Paulo
Teixeira, Ronan Marques [UNESP]
Pires, Francielly Camilla Bazilio Laurindo
Miani, Rodolfo Andrade
de Mattos, Luiz Carlos
Brandão, Cinara Cássia
Castiglioni, Lilian [UNESP]
dc.subject.por.fl_str_mv Cornea
ectasia
genetic polymorphisms
Keratoconus
lysyl oxidase gene
superoxide dismutase 1 gene
TIMP3 gene
visual system homeobox 1 gene
topic Cornea
ectasia
genetic polymorphisms
Keratoconus
lysyl oxidase gene
superoxide dismutase 1 gene
TIMP3 gene
visual system homeobox 1 gene
description Purpose: To identify inherited or acquired mutations in the VSX1, SOD1, TIMP3 and LOX genes from the combined analysis of corneal and blood samples from patients with Keratoconus. Methods: The casuistry was consisted of samples of peripheral blood and corneal epithelium from 35 unrelated patients with Keratoconus who were submitted to corneal crosslink treatment. Also, blood and corneal epithelium samples from 89 non-keratoconic patients were used to compose the control group. Ophthalmologic evaluations included a clinical examination, topography and tomography. DNA samples were extracted from peripheral blood and from corneal epithelium in both groups and all coding regions of the VSX1, SOD1, TIMP3 and LOX genes were amplified by polymerase chain reaction, denatured and subjected to polyacrylamide gel electrophoresis. Mutational screening was performed by single-strand conformation polymorphism and direct DNA sequencing. Results: No pathogenic variant was found in all coding regions of VSX1, SOD1, TIMP3 and LOX genes, we detected only few SNPs (single-nucleotide polymorphisms). Among the polymorphisms stand out three of them, corresponding to the synonymous exchange of amino acids: exon 3 of VSX1 Ala182Ala and exon 3 of TIMP3 His83His and Ser87Ser; in patients with Keratoconus and also in control subjects. All the polymorphisms were found in samples of corneal epithelium and corresponding blood. Conclusion: There is absence of KC pathogenic related to mutations in the VSX1, SOD1, TIMP3 and LOX genes in the studied patients.
publishDate 2021
dc.date.none.fl_str_mv 2021-01-01
2022-04-29T08:36:44Z
2022-04-29T08:36:44Z
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv http://dx.doi.org/10.1080/13816810.2021.1992785
Ophthalmic Genetics.
1744-5094
1381-6810
http://hdl.handle.net/11449/229938
10.1080/13816810.2021.1992785
2-s2.0-85119681084
url http://dx.doi.org/10.1080/13816810.2021.1992785
http://hdl.handle.net/11449/229938
identifier_str_mv Ophthalmic Genetics.
1744-5094
1381-6810
10.1080/13816810.2021.1992785
2-s2.0-85119681084
dc.language.iso.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv Ophthalmic Genetics
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
eu_rights_str_mv openAccess
dc.source.none.fl_str_mv Scopus
reponame:Repositório Institucional da UNESP
instname:Universidade Estadual Paulista (UNESP)
instacron:UNESP
instname_str Universidade Estadual Paulista (UNESP)
instacron_str UNESP
institution UNESP
reponame_str Repositório Institucional da UNESP
collection Repositório Institucional da UNESP
repository.name.fl_str_mv Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP)
repository.mail.fl_str_mv
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