The Satellite DNA Catalogues of Two Serrasalmidae (Teleostei, Characiformes): Conservation of General satDNA Features over 30 Million Years

Detalhes bibliográficos
Autor(a) principal: Goes, Caio Augusto Gomes [UNESP]
Data de Publicação: 2023
Outros Autores: dos Santos, Natalia [UNESP], Rodrigues, Pedro Henrique de Mira [UNESP], Stornioli, José Henrique Forte, Silva, Amanda Bueno da [UNESP], dos Santos, Rodrigo Zeni [UNESP], Vidal, Jhon Alex Dziechciarz, Silva, Duílio Mazzoni Zerbinato de Andrade [UNESP], Artoni, Roberto Ferreira, Foresti, Fausto [UNESP], Hashimoto, Diogo Teruo [UNESP], Porto-Foresti, Fábio [UNESP], Utsunomia, Ricardo [UNESP]
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Institucional da UNESP
Texto Completo: http://dx.doi.org/10.3390/genes14010091
http://hdl.handle.net/11449/248258
Resumo: Satellite DNAs (satDNAs) are tandemly repeated sequences that are usually located on the heterochromatin, and the entire collection of satDNAs within a genome is called satellitome. Primarily, these sequences are not under selective pressure and evolve by concerted evolution, resulting in elevated rates of divergence between the satDNA profiles of reproductive isolated species/populations. Here, we characterized two additional satellitomes of Characiformes fish (Colossoma macropomum and Piaractus mesopotamicus) that diverged approximately 30 million years ago, while still retaining conserved karyotype features. The results we obtained indicated that several satDNAs (50% of satellite sequences in P. mesopotamicus and 43% in C. macropomum) show levels of conservation between the analyzed species, in the nucleotide and chromosomal levels. We propose that long-life cycles and few genomic changes could slow down rates of satDNA differentiation.
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spelling The Satellite DNA Catalogues of Two Serrasalmidae (Teleostei, Characiformes): Conservation of General satDNA Features over 30 Million Yearscytogenomicsfish cytogeneticsrepetitive DNAsatellite DNASatellite DNAs (satDNAs) are tandemly repeated sequences that are usually located on the heterochromatin, and the entire collection of satDNAs within a genome is called satellitome. Primarily, these sequences are not under selective pressure and evolve by concerted evolution, resulting in elevated rates of divergence between the satDNA profiles of reproductive isolated species/populations. Here, we characterized two additional satellitomes of Characiformes fish (Colossoma macropomum and Piaractus mesopotamicus) that diverged approximately 30 million years ago, while still retaining conserved karyotype features. The results we obtained indicated that several satDNAs (50% of satellite sequences in P. mesopotamicus and 43% in C. macropomum) show levels of conservation between the analyzed species, in the nucleotide and chromosomal levels. We propose that long-life cycles and few genomic changes could slow down rates of satDNA differentiation.Faculty of Sciences São Paulo State University (UNESP), SPInstitute of Biological Sciences and Health Federal Rural University of Rio de Janeiro, RJDepartment of Structural Molecular and Genetic Biology State University of Ponta Grossa, PRDepartment of Genetics and Evolution Federal University of São Carlos, SPDepartment of Structural and Functional Biology Institute of Biosciences São Paulo State University, SPAquaculture Center of UNESP São Paulo State University, SPFaculty of Sciences São Paulo State University (UNESP), SPDepartment of Structural and Functional Biology Institute of Biosciences São Paulo State University, SPAquaculture Center of UNESP São Paulo State University, SPUniversidade Estadual Paulista (UNESP)Federal Rural University of Rio de JaneiroState University of Ponta GrossaUniversidade Federal de São Carlos (UFSCar)Goes, Caio Augusto Gomes [UNESP]dos Santos, Natalia [UNESP]Rodrigues, Pedro Henrique de Mira [UNESP]Stornioli, José Henrique ForteSilva, Amanda Bueno da [UNESP]dos Santos, Rodrigo Zeni [UNESP]Vidal, Jhon Alex DziechciarzSilva, Duílio Mazzoni Zerbinato de Andrade [UNESP]Artoni, Roberto FerreiraForesti, Fausto [UNESP]Hashimoto, Diogo Teruo [UNESP]Porto-Foresti, Fábio [UNESP]Utsunomia, Ricardo [UNESP]2023-07-29T13:38:52Z2023-07-29T13:38:52Z2023-01-01info:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articlehttp://dx.doi.org/10.3390/genes14010091Genes, v. 14, n. 1, 2023.2073-4425http://hdl.handle.net/11449/24825810.3390/genes140100912-s2.0-85146791036Scopusreponame:Repositório Institucional da UNESPinstname:Universidade Estadual Paulista (UNESP)instacron:UNESPengGenesinfo:eu-repo/semantics/openAccess2024-04-09T15:10:55Zoai:repositorio.unesp.br:11449/248258Repositório InstitucionalPUBhttp://repositorio.unesp.br/oai/requestopendoar:29462024-08-05T16:17:13.427655Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP)false
dc.title.none.fl_str_mv The Satellite DNA Catalogues of Two Serrasalmidae (Teleostei, Characiformes): Conservation of General satDNA Features over 30 Million Years
title The Satellite DNA Catalogues of Two Serrasalmidae (Teleostei, Characiformes): Conservation of General satDNA Features over 30 Million Years
spellingShingle The Satellite DNA Catalogues of Two Serrasalmidae (Teleostei, Characiformes): Conservation of General satDNA Features over 30 Million Years
Goes, Caio Augusto Gomes [UNESP]
cytogenomics
fish cytogenetics
repetitive DNA
satellite DNA
title_short The Satellite DNA Catalogues of Two Serrasalmidae (Teleostei, Characiformes): Conservation of General satDNA Features over 30 Million Years
title_full The Satellite DNA Catalogues of Two Serrasalmidae (Teleostei, Characiformes): Conservation of General satDNA Features over 30 Million Years
title_fullStr The Satellite DNA Catalogues of Two Serrasalmidae (Teleostei, Characiformes): Conservation of General satDNA Features over 30 Million Years
title_full_unstemmed The Satellite DNA Catalogues of Two Serrasalmidae (Teleostei, Characiformes): Conservation of General satDNA Features over 30 Million Years
title_sort The Satellite DNA Catalogues of Two Serrasalmidae (Teleostei, Characiformes): Conservation of General satDNA Features over 30 Million Years
author Goes, Caio Augusto Gomes [UNESP]
author_facet Goes, Caio Augusto Gomes [UNESP]
dos Santos, Natalia [UNESP]
Rodrigues, Pedro Henrique de Mira [UNESP]
Stornioli, José Henrique Forte
Silva, Amanda Bueno da [UNESP]
dos Santos, Rodrigo Zeni [UNESP]
Vidal, Jhon Alex Dziechciarz
Silva, Duílio Mazzoni Zerbinato de Andrade [UNESP]
Artoni, Roberto Ferreira
Foresti, Fausto [UNESP]
Hashimoto, Diogo Teruo [UNESP]
Porto-Foresti, Fábio [UNESP]
Utsunomia, Ricardo [UNESP]
author_role author
author2 dos Santos, Natalia [UNESP]
Rodrigues, Pedro Henrique de Mira [UNESP]
Stornioli, José Henrique Forte
Silva, Amanda Bueno da [UNESP]
dos Santos, Rodrigo Zeni [UNESP]
Vidal, Jhon Alex Dziechciarz
Silva, Duílio Mazzoni Zerbinato de Andrade [UNESP]
Artoni, Roberto Ferreira
Foresti, Fausto [UNESP]
Hashimoto, Diogo Teruo [UNESP]
Porto-Foresti, Fábio [UNESP]
Utsunomia, Ricardo [UNESP]
author2_role author
author
author
author
author
author
author
author
author
author
author
author
dc.contributor.none.fl_str_mv Universidade Estadual Paulista (UNESP)
Federal Rural University of Rio de Janeiro
State University of Ponta Grossa
Universidade Federal de São Carlos (UFSCar)
dc.contributor.author.fl_str_mv Goes, Caio Augusto Gomes [UNESP]
dos Santos, Natalia [UNESP]
Rodrigues, Pedro Henrique de Mira [UNESP]
Stornioli, José Henrique Forte
Silva, Amanda Bueno da [UNESP]
dos Santos, Rodrigo Zeni [UNESP]
Vidal, Jhon Alex Dziechciarz
Silva, Duílio Mazzoni Zerbinato de Andrade [UNESP]
Artoni, Roberto Ferreira
Foresti, Fausto [UNESP]
Hashimoto, Diogo Teruo [UNESP]
Porto-Foresti, Fábio [UNESP]
Utsunomia, Ricardo [UNESP]
dc.subject.por.fl_str_mv cytogenomics
fish cytogenetics
repetitive DNA
satellite DNA
topic cytogenomics
fish cytogenetics
repetitive DNA
satellite DNA
description Satellite DNAs (satDNAs) are tandemly repeated sequences that are usually located on the heterochromatin, and the entire collection of satDNAs within a genome is called satellitome. Primarily, these sequences are not under selective pressure and evolve by concerted evolution, resulting in elevated rates of divergence between the satDNA profiles of reproductive isolated species/populations. Here, we characterized two additional satellitomes of Characiformes fish (Colossoma macropomum and Piaractus mesopotamicus) that diverged approximately 30 million years ago, while still retaining conserved karyotype features. The results we obtained indicated that several satDNAs (50% of satellite sequences in P. mesopotamicus and 43% in C. macropomum) show levels of conservation between the analyzed species, in the nucleotide and chromosomal levels. We propose that long-life cycles and few genomic changes could slow down rates of satDNA differentiation.
publishDate 2023
dc.date.none.fl_str_mv 2023-07-29T13:38:52Z
2023-07-29T13:38:52Z
2023-01-01
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv http://dx.doi.org/10.3390/genes14010091
Genes, v. 14, n. 1, 2023.
2073-4425
http://hdl.handle.net/11449/248258
10.3390/genes14010091
2-s2.0-85146791036
url http://dx.doi.org/10.3390/genes14010091
http://hdl.handle.net/11449/248258
identifier_str_mv Genes, v. 14, n. 1, 2023.
2073-4425
10.3390/genes14010091
2-s2.0-85146791036
dc.language.iso.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv Genes
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
eu_rights_str_mv openAccess
dc.source.none.fl_str_mv Scopus
reponame:Repositório Institucional da UNESP
instname:Universidade Estadual Paulista (UNESP)
instacron:UNESP
instname_str Universidade Estadual Paulista (UNESP)
instacron_str UNESP
institution UNESP
reponame_str Repositório Institucional da UNESP
collection Repositório Institucional da UNESP
repository.name.fl_str_mv Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP)
repository.mail.fl_str_mv
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