Accelerated Diversification Explains the Exceptional Species Richness of Tropical Characoid Fishes

Detalhes bibliográficos
Autor(a) principal: Melo, Bruno F. [UNESP]
Data de Publicação: 2022
Outros Autores: Sidlauskas, Brian L., Near, Thomas J., Roxo, Fabio F. [UNESP], Ghezelayagh, Ava, Ochoa, Luz E. [UNESP], Stiassny, Melanie L. J., Arroyave, Jairo, Chang, Jonathan, Faircloth, Brant C., MacGuigan, Daniel J., Harrington, Richard C., Benine, Ricardo C. [UNESP], Burns, Michael D., Hoekzema, Kendra, Sanches, Natalia C. [UNESP], Maldonado-Ocampo, Javier A., Castro, Ricardo M. C., Foresti, Fausto [UNESP], Alfaro, Michael E., Oliveira, Claudio [UNESP]
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Institucional da UNESP
Texto Completo: http://dx.doi.org/10.1093/sysbio/syab040
http://hdl.handle.net/11449/233712
Resumo: The Neotropics harbor the most species-rich freshwater fish fauna on the planet, but the timing of that exceptional diversification remains unclear. Did the Neotropics accumulate species steadily throughout their long history, or attain their remarkable diversity recently? Biologists have long debated the relative support for these museum and cradle hypotheses, but few phylogenies of megadiverse tropical clades have included sufficient taxa to distinguish between them. We used 1288 ultraconserved element loci spanning 293 species, 211 genera, and 21 families of characoid fishes to reconstruct a new, fossil-calibrated phylogeny and infer the most likely diversification scenario for a clade that includes a third of Neotropical fish diversity. This phylogeny implies paraphyly of the traditional delimitation of Characiformes because it resolves the largely Neotropical Characoidei as the sister lineage of Siluriformes (catfishes), rather than the African Citharinodei. Time-calibrated phylogenies indicate an ancient origin of major characoid lineages and reveal a much more recent emergence of most characoid species. Diversification rate analyses infer increased speciation and decreased extinction rates during the Oligocene at around 30 Ma during a period of mega-wetland formation in the proto-Orinoco-Amazonas. Three species-rich and ecomorphologically diverse lineages (Anostomidae, Serrasalmidae, and Characidae) that originated more than 60 Ma in the Paleocene experienced particularly notable bursts of Oligocene diversification and now account collectively for 68% of the approximately 2150 species of Characoidei. In addition to paleogeographic changes, we discuss potential accelerants of diversification in these three lineages. While the Neotropics accumulated a museum of ecomorphologically diverse characoid lineages long ago, this geologically dynamic region also cradled a much more recent birth of remarkable species-level diversity. [Biodiversity; Characiformes; macroevolution; Neotropics; phylogenomics; ultraconserved elements.]
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spelling Accelerated Diversification Explains the Exceptional Species Richness of Tropical Characoid FishesThe Neotropics harbor the most species-rich freshwater fish fauna on the planet, but the timing of that exceptional diversification remains unclear. Did the Neotropics accumulate species steadily throughout their long history, or attain their remarkable diversity recently? Biologists have long debated the relative support for these museum and cradle hypotheses, but few phylogenies of megadiverse tropical clades have included sufficient taxa to distinguish between them. We used 1288 ultraconserved element loci spanning 293 species, 211 genera, and 21 families of characoid fishes to reconstruct a new, fossil-calibrated phylogeny and infer the most likely diversification scenario for a clade that includes a third of Neotropical fish diversity. This phylogeny implies paraphyly of the traditional delimitation of Characiformes because it resolves the largely Neotropical Characoidei as the sister lineage of Siluriformes (catfishes), rather than the African Citharinodei. Time-calibrated phylogenies indicate an ancient origin of major characoid lineages and reveal a much more recent emergence of most characoid species. Diversification rate analyses infer increased speciation and decreased extinction rates during the Oligocene at around 30 Ma during a period of mega-wetland formation in the proto-Orinoco-Amazonas. Three species-rich and ecomorphologically diverse lineages (Anostomidae, Serrasalmidae, and Characidae) that originated more than 60 Ma in the Paleocene experienced particularly notable bursts of Oligocene diversification and now account collectively for 68% of the approximately 2150 species of Characoidei. In addition to paleogeographic changes, we discuss potential accelerants of diversification in these three lineages. While the Neotropics accumulated a museum of ecomorphologically diverse characoid lineages long ago, this geologically dynamic region also cradled a much more recent birth of remarkable species-level diversity. [Biodiversity; Characiformes; macroevolution; Neotropics; phylogenomics; ultraconserved elements.]Department of Structural and Functional Biology Institute of Biosciences São Paulo State UniversityDepartment of Fisheries Wildlife and Conservation Sciences Oregon State UniversityDepartment of Ecology and Evolutionary Biology Yale UniversitySector of Zoology Institute of Biosciences São Paulo State UniversityInstituto de Investigación de Recursos Biológicos Alexander von Humboldt, Valle del CaucaDepartment of Ichthyology American Museum of Natural HistoryInstituto de Biologiìa Universidad Nacional Autónoma de MexicoSchool of Biological Sciences Monash UniversityDepartment of Biological Sciences and Museum of Natural Science Louisiana State UniversityCornell Lab of Ornithology Cornell University Museum of VertebratesDepartment de Biología Facultad de Ciencias Pontificia Universidad JaverianaFaculdade de Filosofia Ciências e Letras Universidade de São Paulo SPDepartment of Ecology and Evolutionary Biology University of CaliforniaDepartment of Structural and Functional Biology Institute of Biosciences São Paulo State UniversitySector of Zoology Institute of Biosciences São Paulo State UniversityUniversidade Estadual Paulista (UNESP)Oregon State UniversityYale UniversityInstituto de Investigación de Recursos Biológicos Alexander von HumboldtAmerican Museum of Natural HistoryUniversidad Nacional Autónoma de MexicoMonash UniversityLouisiana State UniversityCornell University Museum of VertebratesPontificia Universidad JaverianaUniversidade de São Paulo (USP)University of CaliforniaMelo, Bruno F. [UNESP]Sidlauskas, Brian L.Near, Thomas J.Roxo, Fabio F. [UNESP]Ghezelayagh, AvaOchoa, Luz E. [UNESP]Stiassny, Melanie L. J.Arroyave, JairoChang, JonathanFaircloth, Brant C.MacGuigan, Daniel J.Harrington, Richard C.Benine, Ricardo C. [UNESP]Burns, Michael D.Hoekzema, KendraSanches, Natalia C. [UNESP]Maldonado-Ocampo, Javier A.Castro, Ricardo M. C.Foresti, Fausto [UNESP]Alfaro, Michael E.Oliveira, Claudio [UNESP]2022-05-01T09:47:22Z2022-05-01T09:47:22Z2022-01-01info:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/article78-92http://dx.doi.org/10.1093/sysbio/syab040Systematic Biology, v. 71, n. 1, p. 78-92, 2022.1076-836X1063-5157http://hdl.handle.net/11449/23371210.1093/sysbio/syab0402-s2.0-85117456288Scopusreponame:Repositório Institucional da UNESPinstname:Universidade Estadual Paulista (UNESP)instacron:UNESPengSystematic Biologyinfo:eu-repo/semantics/openAccess2022-05-01T09:47:22Zoai:repositorio.unesp.br:11449/233712Repositório InstitucionalPUBhttp://repositorio.unesp.br/oai/requestopendoar:29462024-08-05T20:43:57.778343Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP)false
dc.title.none.fl_str_mv Accelerated Diversification Explains the Exceptional Species Richness of Tropical Characoid Fishes
title Accelerated Diversification Explains the Exceptional Species Richness of Tropical Characoid Fishes
spellingShingle Accelerated Diversification Explains the Exceptional Species Richness of Tropical Characoid Fishes
Melo, Bruno F. [UNESP]
title_short Accelerated Diversification Explains the Exceptional Species Richness of Tropical Characoid Fishes
title_full Accelerated Diversification Explains the Exceptional Species Richness of Tropical Characoid Fishes
title_fullStr Accelerated Diversification Explains the Exceptional Species Richness of Tropical Characoid Fishes
title_full_unstemmed Accelerated Diversification Explains the Exceptional Species Richness of Tropical Characoid Fishes
title_sort Accelerated Diversification Explains the Exceptional Species Richness of Tropical Characoid Fishes
author Melo, Bruno F. [UNESP]
author_facet Melo, Bruno F. [UNESP]
Sidlauskas, Brian L.
Near, Thomas J.
Roxo, Fabio F. [UNESP]
Ghezelayagh, Ava
Ochoa, Luz E. [UNESP]
Stiassny, Melanie L. J.
Arroyave, Jairo
Chang, Jonathan
Faircloth, Brant C.
MacGuigan, Daniel J.
Harrington, Richard C.
Benine, Ricardo C. [UNESP]
Burns, Michael D.
Hoekzema, Kendra
Sanches, Natalia C. [UNESP]
Maldonado-Ocampo, Javier A.
Castro, Ricardo M. C.
Foresti, Fausto [UNESP]
Alfaro, Michael E.
Oliveira, Claudio [UNESP]
author_role author
author2 Sidlauskas, Brian L.
Near, Thomas J.
Roxo, Fabio F. [UNESP]
Ghezelayagh, Ava
Ochoa, Luz E. [UNESP]
Stiassny, Melanie L. J.
Arroyave, Jairo
Chang, Jonathan
Faircloth, Brant C.
MacGuigan, Daniel J.
Harrington, Richard C.
Benine, Ricardo C. [UNESP]
Burns, Michael D.
Hoekzema, Kendra
Sanches, Natalia C. [UNESP]
Maldonado-Ocampo, Javier A.
Castro, Ricardo M. C.
Foresti, Fausto [UNESP]
Alfaro, Michael E.
Oliveira, Claudio [UNESP]
author2_role author
author
author
author
author
author
author
author
author
author
author
author
author
author
author
author
author
author
author
author
dc.contributor.none.fl_str_mv Universidade Estadual Paulista (UNESP)
Oregon State University
Yale University
Instituto de Investigación de Recursos Biológicos Alexander von Humboldt
American Museum of Natural History
Universidad Nacional Autónoma de Mexico
Monash University
Louisiana State University
Cornell University Museum of Vertebrates
Pontificia Universidad Javeriana
Universidade de São Paulo (USP)
University of California
dc.contributor.author.fl_str_mv Melo, Bruno F. [UNESP]
Sidlauskas, Brian L.
Near, Thomas J.
Roxo, Fabio F. [UNESP]
Ghezelayagh, Ava
Ochoa, Luz E. [UNESP]
Stiassny, Melanie L. J.
Arroyave, Jairo
Chang, Jonathan
Faircloth, Brant C.
MacGuigan, Daniel J.
Harrington, Richard C.
Benine, Ricardo C. [UNESP]
Burns, Michael D.
Hoekzema, Kendra
Sanches, Natalia C. [UNESP]
Maldonado-Ocampo, Javier A.
Castro, Ricardo M. C.
Foresti, Fausto [UNESP]
Alfaro, Michael E.
Oliveira, Claudio [UNESP]
description The Neotropics harbor the most species-rich freshwater fish fauna on the planet, but the timing of that exceptional diversification remains unclear. Did the Neotropics accumulate species steadily throughout their long history, or attain their remarkable diversity recently? Biologists have long debated the relative support for these museum and cradle hypotheses, but few phylogenies of megadiverse tropical clades have included sufficient taxa to distinguish between them. We used 1288 ultraconserved element loci spanning 293 species, 211 genera, and 21 families of characoid fishes to reconstruct a new, fossil-calibrated phylogeny and infer the most likely diversification scenario for a clade that includes a third of Neotropical fish diversity. This phylogeny implies paraphyly of the traditional delimitation of Characiformes because it resolves the largely Neotropical Characoidei as the sister lineage of Siluriformes (catfishes), rather than the African Citharinodei. Time-calibrated phylogenies indicate an ancient origin of major characoid lineages and reveal a much more recent emergence of most characoid species. Diversification rate analyses infer increased speciation and decreased extinction rates during the Oligocene at around 30 Ma during a period of mega-wetland formation in the proto-Orinoco-Amazonas. Three species-rich and ecomorphologically diverse lineages (Anostomidae, Serrasalmidae, and Characidae) that originated more than 60 Ma in the Paleocene experienced particularly notable bursts of Oligocene diversification and now account collectively for 68% of the approximately 2150 species of Characoidei. In addition to paleogeographic changes, we discuss potential accelerants of diversification in these three lineages. While the Neotropics accumulated a museum of ecomorphologically diverse characoid lineages long ago, this geologically dynamic region also cradled a much more recent birth of remarkable species-level diversity. [Biodiversity; Characiformes; macroevolution; Neotropics; phylogenomics; ultraconserved elements.]
publishDate 2022
dc.date.none.fl_str_mv 2022-05-01T09:47:22Z
2022-05-01T09:47:22Z
2022-01-01
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv http://dx.doi.org/10.1093/sysbio/syab040
Systematic Biology, v. 71, n. 1, p. 78-92, 2022.
1076-836X
1063-5157
http://hdl.handle.net/11449/233712
10.1093/sysbio/syab040
2-s2.0-85117456288
url http://dx.doi.org/10.1093/sysbio/syab040
http://hdl.handle.net/11449/233712
identifier_str_mv Systematic Biology, v. 71, n. 1, p. 78-92, 2022.
1076-836X
1063-5157
10.1093/sysbio/syab040
2-s2.0-85117456288
dc.language.iso.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv Systematic Biology
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
eu_rights_str_mv openAccess
dc.format.none.fl_str_mv 78-92
dc.source.none.fl_str_mv Scopus
reponame:Repositório Institucional da UNESP
instname:Universidade Estadual Paulista (UNESP)
instacron:UNESP
instname_str Universidade Estadual Paulista (UNESP)
instacron_str UNESP
institution UNESP
reponame_str Repositório Institucional da UNESP
collection Repositório Institucional da UNESP
repository.name.fl_str_mv Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP)
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