First Chromosomal Analysis in Hepsetidae (Actinopterygii, Characiformes): Insights into Relationship between African and Neotropical Fish Groups

Detalhes bibliográficos
Autor(a) principal: Carvalho, Pedro C.
Data de Publicação: 2017
Outros Autores: Oliveira, Ezequiel A. de, Bertollo, Luiz A. C., Yano, Cassia F., Oliveira, Claudio [UNESP], Decru, Eva, Jegede, Oladele I., Hatanaka, Terumi, Liehr, Thomas, Al-Rikabi, Ahmed B. H., Cioffi, Marcelo de B.
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Institucional da UNESP
Texto Completo: http://dx.doi.org/10.3389/fgene.2017.00203
http://hdl.handle.net/11449/163618
Resumo: Hepsetidae is a small fish family with only the genus Hepsetus, with six described species distributed throughout the South, Central and Western regions of Africa, showing a close relationship with the Alestidae and some Neotropical fish families. However, no cytogenetic information is available for both Hepsetidae and Alestidae species, thus preventing any evolutionary comparative studies at the chromosomal level. In the present study, we are providing new cytogenetic data for Hepsetus odoe, including the standard karyotype, C-banding, repetitive DNAs mapping, comparative genomic hybridization (CGH) and whole chromosome painting (WCP), providing chromosomal patterns and subsidies for comparative cytogenetics with other characiform families. Both males and females H. odoe have 2n = 58 chromosomes (10m + 28sm + 20st/a), with most of the C-band positive heterochromatin localized in the centromeric and subtelomeric regions. Only one pair of chromosomes bears proximal 5S rDNA sites in the short arms, contrasting with the 18S rDNA sequences which are located in the terminal regions of four chromosome pairs. Clear interstitial hybridization signals are evidenced for the U1 and U2 snDNA probes, but in only one and two chromosome pairs, respectively. Microsatellite motifs are widely distributed in the karyotype, with exception for the (CGG)(10), (GAA)(10) and (GAG)(10) probes, which highlight conspicuous interstitial signals on an unique pair of chromosomes. Comparative data from conventional and molecular cytogenetics, including CGH and WCP experiments, indicate that H. odoe and some Erythrinidae species, particularly Erythrinus erythrinus, share similar chromosomal sequences suggesting some relatedness among them, although bearing genomic specificities in view of their divergent evolutionary histories.
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spelling First Chromosomal Analysis in Hepsetidae (Actinopterygii, Characiformes): Insights into Relationship between African and Neotropical Fish Groupsfishesmolecular cytogeneticschromosomal paintingcomparative genomic hybridization (CGH)karyotype evolutionHepsetidae is a small fish family with only the genus Hepsetus, with six described species distributed throughout the South, Central and Western regions of Africa, showing a close relationship with the Alestidae and some Neotropical fish families. However, no cytogenetic information is available for both Hepsetidae and Alestidae species, thus preventing any evolutionary comparative studies at the chromosomal level. In the present study, we are providing new cytogenetic data for Hepsetus odoe, including the standard karyotype, C-banding, repetitive DNAs mapping, comparative genomic hybridization (CGH) and whole chromosome painting (WCP), providing chromosomal patterns and subsidies for comparative cytogenetics with other characiform families. Both males and females H. odoe have 2n = 58 chromosomes (10m + 28sm + 20st/a), with most of the C-band positive heterochromatin localized in the centromeric and subtelomeric regions. Only one pair of chromosomes bears proximal 5S rDNA sites in the short arms, contrasting with the 18S rDNA sequences which are located in the terminal regions of four chromosome pairs. Clear interstitial hybridization signals are evidenced for the U1 and U2 snDNA probes, but in only one and two chromosome pairs, respectively. Microsatellite motifs are widely distributed in the karyotype, with exception for the (CGG)(10), (GAA)(10) and (GAG)(10) probes, which highlight conspicuous interstitial signals on an unique pair of chromosomes. Comparative data from conventional and molecular cytogenetics, including CGH and WCP experiments, indicate that H. odoe and some Erythrinidae species, particularly Erythrinus erythrinus, share similar chromosomal sequences suggesting some relatedness among them, although bearing genomic specificities in view of their divergent evolutionary histories.Conselho Nacional de Desenvolvimento Científico e Tecnológico (CNPq)Fundação de Amparo à Pesquisa do Estado de São Paulo (FAPESP)Univ Fed Sao Carlos, Dept Genet & Evolucao, Sao Carlos, SP, BrazilEstado Educ Mato Grosso Seduc MT, Cuiaba, BrazilUniv Estadual Paulista, Inst Biociencias, Dept Morfol, Botucatu, SP, BrazilRoyal Museum Cent Africa, Sect Vertebrates Ichthyol, Tervuren, BelgiumAdamawa State Univ, Dept Fisheries & Aquaculture, Mubi, NigeriaUniv Hosp Jena, Inst Human Genet, Jena, GermanyUniv Estadual Paulista, Inst Biociencias, Dept Morfol, Botucatu, SP, BrazilCNPq: 304992/2015-1CNPq: 401575/2016-0FAPESP: 2016/21411-7FAPESP: 2016/17556-0FAPESP: 2017/08471-3FAPESP: FAPESP 2014/26508-3FAPESP: CNPq 306054/2006-0Frontiers Media SaUniversidade Federal de São Carlos (UFSCar)Estado Educ Mato Grosso Seduc MTUniversidade Estadual Paulista (Unesp)Royal Museum Cent AfricaAdamawa State UnivUniv Hosp JenaCarvalho, Pedro C.Oliveira, Ezequiel A. deBertollo, Luiz A. C.Yano, Cassia F.Oliveira, Claudio [UNESP]Decru, EvaJegede, Oladele I.Hatanaka, TerumiLiehr, ThomasAl-Rikabi, Ahmed B. H.Cioffi, Marcelo de B.2018-11-26T17:42:46Z2018-11-26T17:42:46Z2017-12-12info:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/article12application/pdfhttp://dx.doi.org/10.3389/fgene.2017.00203Frontiers In Genetics. Lausanne: Frontiers Media Sa, v. 8, 12 p., 2017.1664-8021http://hdl.handle.net/11449/16361810.3389/fgene.2017.00203WOS:000417740600002WOS000417740600002.pdfWeb of Sciencereponame:Repositório Institucional da UNESPinstname:Universidade Estadual Paulista (UNESP)instacron:UNESPengFrontiers In Genetics2,274info:eu-repo/semantics/openAccess2024-01-17T06:30:52Zoai:repositorio.unesp.br:11449/163618Repositório InstitucionalPUBhttp://repositorio.unesp.br/oai/requestopendoar:29462024-08-05T23:18:44.488902Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP)false
dc.title.none.fl_str_mv First Chromosomal Analysis in Hepsetidae (Actinopterygii, Characiformes): Insights into Relationship between African and Neotropical Fish Groups
title First Chromosomal Analysis in Hepsetidae (Actinopterygii, Characiformes): Insights into Relationship between African and Neotropical Fish Groups
spellingShingle First Chromosomal Analysis in Hepsetidae (Actinopterygii, Characiformes): Insights into Relationship between African and Neotropical Fish Groups
Carvalho, Pedro C.
fishes
molecular cytogenetics
chromosomal painting
comparative genomic hybridization (CGH)
karyotype evolution
title_short First Chromosomal Analysis in Hepsetidae (Actinopterygii, Characiformes): Insights into Relationship between African and Neotropical Fish Groups
title_full First Chromosomal Analysis in Hepsetidae (Actinopterygii, Characiformes): Insights into Relationship between African and Neotropical Fish Groups
title_fullStr First Chromosomal Analysis in Hepsetidae (Actinopterygii, Characiformes): Insights into Relationship between African and Neotropical Fish Groups
title_full_unstemmed First Chromosomal Analysis in Hepsetidae (Actinopterygii, Characiformes): Insights into Relationship between African and Neotropical Fish Groups
title_sort First Chromosomal Analysis in Hepsetidae (Actinopterygii, Characiformes): Insights into Relationship between African and Neotropical Fish Groups
author Carvalho, Pedro C.
author_facet Carvalho, Pedro C.
Oliveira, Ezequiel A. de
Bertollo, Luiz A. C.
Yano, Cassia F.
Oliveira, Claudio [UNESP]
Decru, Eva
Jegede, Oladele I.
Hatanaka, Terumi
Liehr, Thomas
Al-Rikabi, Ahmed B. H.
Cioffi, Marcelo de B.
author_role author
author2 Oliveira, Ezequiel A. de
Bertollo, Luiz A. C.
Yano, Cassia F.
Oliveira, Claudio [UNESP]
Decru, Eva
Jegede, Oladele I.
Hatanaka, Terumi
Liehr, Thomas
Al-Rikabi, Ahmed B. H.
Cioffi, Marcelo de B.
author2_role author
author
author
author
author
author
author
author
author
author
dc.contributor.none.fl_str_mv Universidade Federal de São Carlos (UFSCar)
Estado Educ Mato Grosso Seduc MT
Universidade Estadual Paulista (Unesp)
Royal Museum Cent Africa
Adamawa State Univ
Univ Hosp Jena
dc.contributor.author.fl_str_mv Carvalho, Pedro C.
Oliveira, Ezequiel A. de
Bertollo, Luiz A. C.
Yano, Cassia F.
Oliveira, Claudio [UNESP]
Decru, Eva
Jegede, Oladele I.
Hatanaka, Terumi
Liehr, Thomas
Al-Rikabi, Ahmed B. H.
Cioffi, Marcelo de B.
dc.subject.por.fl_str_mv fishes
molecular cytogenetics
chromosomal painting
comparative genomic hybridization (CGH)
karyotype evolution
topic fishes
molecular cytogenetics
chromosomal painting
comparative genomic hybridization (CGH)
karyotype evolution
description Hepsetidae is a small fish family with only the genus Hepsetus, with six described species distributed throughout the South, Central and Western regions of Africa, showing a close relationship with the Alestidae and some Neotropical fish families. However, no cytogenetic information is available for both Hepsetidae and Alestidae species, thus preventing any evolutionary comparative studies at the chromosomal level. In the present study, we are providing new cytogenetic data for Hepsetus odoe, including the standard karyotype, C-banding, repetitive DNAs mapping, comparative genomic hybridization (CGH) and whole chromosome painting (WCP), providing chromosomal patterns and subsidies for comparative cytogenetics with other characiform families. Both males and females H. odoe have 2n = 58 chromosomes (10m + 28sm + 20st/a), with most of the C-band positive heterochromatin localized in the centromeric and subtelomeric regions. Only one pair of chromosomes bears proximal 5S rDNA sites in the short arms, contrasting with the 18S rDNA sequences which are located in the terminal regions of four chromosome pairs. Clear interstitial hybridization signals are evidenced for the U1 and U2 snDNA probes, but in only one and two chromosome pairs, respectively. Microsatellite motifs are widely distributed in the karyotype, with exception for the (CGG)(10), (GAA)(10) and (GAG)(10) probes, which highlight conspicuous interstitial signals on an unique pair of chromosomes. Comparative data from conventional and molecular cytogenetics, including CGH and WCP experiments, indicate that H. odoe and some Erythrinidae species, particularly Erythrinus erythrinus, share similar chromosomal sequences suggesting some relatedness among them, although bearing genomic specificities in view of their divergent evolutionary histories.
publishDate 2017
dc.date.none.fl_str_mv 2017-12-12
2018-11-26T17:42:46Z
2018-11-26T17:42:46Z
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv http://dx.doi.org/10.3389/fgene.2017.00203
Frontiers In Genetics. Lausanne: Frontiers Media Sa, v. 8, 12 p., 2017.
1664-8021
http://hdl.handle.net/11449/163618
10.3389/fgene.2017.00203
WOS:000417740600002
WOS000417740600002.pdf
url http://dx.doi.org/10.3389/fgene.2017.00203
http://hdl.handle.net/11449/163618
identifier_str_mv Frontiers In Genetics. Lausanne: Frontiers Media Sa, v. 8, 12 p., 2017.
1664-8021
10.3389/fgene.2017.00203
WOS:000417740600002
WOS000417740600002.pdf
dc.language.iso.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv Frontiers In Genetics
2,274
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
eu_rights_str_mv openAccess
dc.format.none.fl_str_mv 12
application/pdf
dc.publisher.none.fl_str_mv Frontiers Media Sa
publisher.none.fl_str_mv Frontiers Media Sa
dc.source.none.fl_str_mv Web of Science
reponame:Repositório Institucional da UNESP
instname:Universidade Estadual Paulista (UNESP)
instacron:UNESP
instname_str Universidade Estadual Paulista (UNESP)
instacron_str UNESP
institution UNESP
reponame_str Repositório Institucional da UNESP
collection Repositório Institucional da UNESP
repository.name.fl_str_mv Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP)
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