Morphological variation and isozyme diversity in Dioscorea alata L. landraces from Vale do Ribeira, Brazil

Detalhes bibliográficos
Autor(a) principal: Bressan,Eduardo de Andrade
Data de Publicação: 2011
Outros Autores: Briner Neto,Thiago, Zucchi,Maria Imaculada, Rabello,Ronaldo José, Veasey,Elizabeth Ann
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Scientia Agrícola (Online)
Texto Completo: http://old.scielo.br/scielo.php?script=sci_arttext&pid=S0103-90162011000400016
Resumo: Traditional growers of the Vale do Ribeira, São Paulo State, grow and make use of several D. alata landraces. This study assessed the genetic diversity of 16 landraces, using isozymatic and morphological markers and comparing them with 19 commercial varieties of D. alata. Their distribution in different levels of organization such as households and communities of the Vale do Ribeira was evaluated. Isozymatic analyses were performed with polyacrylamide (six systems) and starch gels (one system), while the morphological analyses were carried out with 24 traits. Due to the polyploid nature of this species, the isozymatic bands were scored as binary data. Morphological traits were also scored as binary data. Principal coordinates and cluster analyses were conducted for both markers, using for the later the Jaccard´s similarity coefficient and UPGMA method. The separation of the landraces from the commercial varieties, which showed lower genetic diversity, was reported for both markers. No correlation between genetic and geographical distances was found for both data, which suggests that the observed variability is not spatially structured. Also, no correlation was found between both markers. The analysis of molecular variance (AMOVA) indicated that genetic diversity was mainly found within households for both isozymatic (54%) and morphological (70%) markers. The results obtained for both markers revealed the importance of traditional agriculturists in the Vale do Ribeira in maintaining high diversity for D. alata, even higher than the varieties commercialized in São Paulo State, contributing for the in situ/on farm conservation of this crop.
id USP-18_0c692fda24a4d6168fad906fae6d826d
oai_identifier_str oai:scielo:S0103-90162011000400016
network_acronym_str USP-18
network_name_str Scientia Agrícola (Online)
repository_id_str
spelling Morphological variation and isozyme diversity in Dioscorea alata L. landraces from Vale do Ribeira, BrazilAMOVAtraditional agriculturegenetic diversitywater yamTraditional growers of the Vale do Ribeira, São Paulo State, grow and make use of several D. alata landraces. This study assessed the genetic diversity of 16 landraces, using isozymatic and morphological markers and comparing them with 19 commercial varieties of D. alata. Their distribution in different levels of organization such as households and communities of the Vale do Ribeira was evaluated. Isozymatic analyses were performed with polyacrylamide (six systems) and starch gels (one system), while the morphological analyses were carried out with 24 traits. Due to the polyploid nature of this species, the isozymatic bands were scored as binary data. Morphological traits were also scored as binary data. Principal coordinates and cluster analyses were conducted for both markers, using for the later the Jaccard´s similarity coefficient and UPGMA method. The separation of the landraces from the commercial varieties, which showed lower genetic diversity, was reported for both markers. No correlation between genetic and geographical distances was found for both data, which suggests that the observed variability is not spatially structured. Also, no correlation was found between both markers. The analysis of molecular variance (AMOVA) indicated that genetic diversity was mainly found within households for both isozymatic (54%) and morphological (70%) markers. The results obtained for both markers revealed the importance of traditional agriculturists in the Vale do Ribeira in maintaining high diversity for D. alata, even higher than the varieties commercialized in São Paulo State, contributing for the in situ/on farm conservation of this crop.Escola Superior de Agricultura "Luiz de Queiroz"2011-08-01info:eu-repo/semantics/articleinfo:eu-repo/semantics/publishedVersiontext/htmlhttp://old.scielo.br/scielo.php?script=sci_arttext&pid=S0103-90162011000400016Scientia Agricola v.68 n.4 2011reponame:Scientia Agrícola (Online)instname:Universidade de São Paulo (USP)instacron:USP10.1590/S0103-90162011000400016info:eu-repo/semantics/openAccessBressan,Eduardo de AndradeBriner Neto,ThiagoZucchi,Maria ImaculadaRabello,Ronaldo JoséVeasey,Elizabeth Anneng2011-09-22T00:00:00Zoai:scielo:S0103-90162011000400016Revistahttp://revistas.usp.br/sa/indexPUBhttps://old.scielo.br/oai/scielo-oai.phpscientia@usp.br||alleoni@usp.br1678-992X0103-9016opendoar:2011-09-22T00:00Scientia Agrícola (Online) - Universidade de São Paulo (USP)false
dc.title.none.fl_str_mv Morphological variation and isozyme diversity in Dioscorea alata L. landraces from Vale do Ribeira, Brazil
title Morphological variation and isozyme diversity in Dioscorea alata L. landraces from Vale do Ribeira, Brazil
spellingShingle Morphological variation and isozyme diversity in Dioscorea alata L. landraces from Vale do Ribeira, Brazil
Bressan,Eduardo de Andrade
AMOVA
traditional agriculture
genetic diversity
water yam
title_short Morphological variation and isozyme diversity in Dioscorea alata L. landraces from Vale do Ribeira, Brazil
title_full Morphological variation and isozyme diversity in Dioscorea alata L. landraces from Vale do Ribeira, Brazil
title_fullStr Morphological variation and isozyme diversity in Dioscorea alata L. landraces from Vale do Ribeira, Brazil
title_full_unstemmed Morphological variation and isozyme diversity in Dioscorea alata L. landraces from Vale do Ribeira, Brazil
title_sort Morphological variation and isozyme diversity in Dioscorea alata L. landraces from Vale do Ribeira, Brazil
author Bressan,Eduardo de Andrade
author_facet Bressan,Eduardo de Andrade
Briner Neto,Thiago
Zucchi,Maria Imaculada
Rabello,Ronaldo José
Veasey,Elizabeth Ann
author_role author
author2 Briner Neto,Thiago
Zucchi,Maria Imaculada
Rabello,Ronaldo José
Veasey,Elizabeth Ann
author2_role author
author
author
author
dc.contributor.author.fl_str_mv Bressan,Eduardo de Andrade
Briner Neto,Thiago
Zucchi,Maria Imaculada
Rabello,Ronaldo José
Veasey,Elizabeth Ann
dc.subject.por.fl_str_mv AMOVA
traditional agriculture
genetic diversity
water yam
topic AMOVA
traditional agriculture
genetic diversity
water yam
description Traditional growers of the Vale do Ribeira, São Paulo State, grow and make use of several D. alata landraces. This study assessed the genetic diversity of 16 landraces, using isozymatic and morphological markers and comparing them with 19 commercial varieties of D. alata. Their distribution in different levels of organization such as households and communities of the Vale do Ribeira was evaluated. Isozymatic analyses were performed with polyacrylamide (six systems) and starch gels (one system), while the morphological analyses were carried out with 24 traits. Due to the polyploid nature of this species, the isozymatic bands were scored as binary data. Morphological traits were also scored as binary data. Principal coordinates and cluster analyses were conducted for both markers, using for the later the Jaccard´s similarity coefficient and UPGMA method. The separation of the landraces from the commercial varieties, which showed lower genetic diversity, was reported for both markers. No correlation between genetic and geographical distances was found for both data, which suggests that the observed variability is not spatially structured. Also, no correlation was found between both markers. The analysis of molecular variance (AMOVA) indicated that genetic diversity was mainly found within households for both isozymatic (54%) and morphological (70%) markers. The results obtained for both markers revealed the importance of traditional agriculturists in the Vale do Ribeira in maintaining high diversity for D. alata, even higher than the varieties commercialized in São Paulo State, contributing for the in situ/on farm conservation of this crop.
publishDate 2011
dc.date.none.fl_str_mv 2011-08-01
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv http://old.scielo.br/scielo.php?script=sci_arttext&pid=S0103-90162011000400016
url http://old.scielo.br/scielo.php?script=sci_arttext&pid=S0103-90162011000400016
dc.language.iso.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv 10.1590/S0103-90162011000400016
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
eu_rights_str_mv openAccess
dc.format.none.fl_str_mv text/html
dc.publisher.none.fl_str_mv Escola Superior de Agricultura "Luiz de Queiroz"
publisher.none.fl_str_mv Escola Superior de Agricultura "Luiz de Queiroz"
dc.source.none.fl_str_mv Scientia Agricola v.68 n.4 2011
reponame:Scientia Agrícola (Online)
instname:Universidade de São Paulo (USP)
instacron:USP
instname_str Universidade de São Paulo (USP)
instacron_str USP
institution USP
reponame_str Scientia Agrícola (Online)
collection Scientia Agrícola (Online)
repository.name.fl_str_mv Scientia Agrícola (Online) - Universidade de São Paulo (USP)
repository.mail.fl_str_mv scientia@usp.br||alleoni@usp.br
_version_ 1748936462476247040