‘Gametes Simulator’: a multilocus genotype simulator to analyze genetic structure in outbreeding diploid species

Detalhes bibliográficos
Autor(a) principal: Porta,Bettina
Data de Publicação: 2020
Outros Autores: Fernández,Peter, Galván,Guillermo A., Priano,Federico Condón
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Crop Breeding and Applied Biotechnology
Texto Completo: http://old.scielo.br/scielo.php?script=sci_arttext&pid=S1984-70332020000100400
Resumo: Abstract Bulk sampling and subsequent DNA fingerprinting are applied to obtain estimated allelic frequency data and unveil population structure for outbreeding species. We developed ‘Gametes Simulator’, a routine to simulate gametes from allelic frequencies of unlinked loci, which enables the analysis of population structure through Bayesian analysis. Based on the allelic frequencies in the populations, the software simulates the alleles per population in the right proportions and assigns one allele per marker to each gamete following Mendel’s laws that govern gametogenesis.
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spelling ‘Gametes Simulator’: a multilocus genotype simulator to analyze genetic structure in outbreeding diploid speciesBulk samplingunlinked lociallelic frequencies.Abstract Bulk sampling and subsequent DNA fingerprinting are applied to obtain estimated allelic frequency data and unveil population structure for outbreeding species. We developed ‘Gametes Simulator’, a routine to simulate gametes from allelic frequencies of unlinked loci, which enables the analysis of population structure through Bayesian analysis. Based on the allelic frequencies in the populations, the software simulates the alleles per population in the right proportions and assigns one allele per marker to each gamete following Mendel’s laws that govern gametogenesis.Crop Breeding and Applied Biotechnology2020-01-01info:eu-repo/semantics/articleinfo:eu-repo/semantics/publishedVersiontext/htmlhttp://old.scielo.br/scielo.php?script=sci_arttext&pid=S1984-70332020000100400Crop Breeding and Applied Biotechnology v.20 n.1 2020reponame:Crop Breeding and Applied Biotechnologyinstname:Sociedade Brasileira de Melhoramento de Plantasinstacron:CBAB10.1590/1984-70332020v20n1s9info:eu-repo/semantics/openAccessPorta,BettinaFernández,PeterGalván,Guillermo A.Priano,Federico Condóneng2020-03-20T00:00:00Zoai:scielo:S1984-70332020000100400Revistahttps://cbab.sbmp.org.br/#ONGhttps://old.scielo.br/oai/scielo-oai.phpcbabjournal@gmail.com||cbab@ufv.br1984-70331518-7853opendoar:2020-03-20T00:00Crop Breeding and Applied Biotechnology - Sociedade Brasileira de Melhoramento de Plantasfalse
dc.title.none.fl_str_mv ‘Gametes Simulator’: a multilocus genotype simulator to analyze genetic structure in outbreeding diploid species
title ‘Gametes Simulator’: a multilocus genotype simulator to analyze genetic structure in outbreeding diploid species
spellingShingle ‘Gametes Simulator’: a multilocus genotype simulator to analyze genetic structure in outbreeding diploid species
Porta,Bettina
Bulk sampling
unlinked loci
allelic frequencies.
title_short ‘Gametes Simulator’: a multilocus genotype simulator to analyze genetic structure in outbreeding diploid species
title_full ‘Gametes Simulator’: a multilocus genotype simulator to analyze genetic structure in outbreeding diploid species
title_fullStr ‘Gametes Simulator’: a multilocus genotype simulator to analyze genetic structure in outbreeding diploid species
title_full_unstemmed ‘Gametes Simulator’: a multilocus genotype simulator to analyze genetic structure in outbreeding diploid species
title_sort ‘Gametes Simulator’: a multilocus genotype simulator to analyze genetic structure in outbreeding diploid species
author Porta,Bettina
author_facet Porta,Bettina
Fernández,Peter
Galván,Guillermo A.
Priano,Federico Condón
author_role author
author2 Fernández,Peter
Galván,Guillermo A.
Priano,Federico Condón
author2_role author
author
author
dc.contributor.author.fl_str_mv Porta,Bettina
Fernández,Peter
Galván,Guillermo A.
Priano,Federico Condón
dc.subject.por.fl_str_mv Bulk sampling
unlinked loci
allelic frequencies.
topic Bulk sampling
unlinked loci
allelic frequencies.
description Abstract Bulk sampling and subsequent DNA fingerprinting are applied to obtain estimated allelic frequency data and unveil population structure for outbreeding species. We developed ‘Gametes Simulator’, a routine to simulate gametes from allelic frequencies of unlinked loci, which enables the analysis of population structure through Bayesian analysis. Based on the allelic frequencies in the populations, the software simulates the alleles per population in the right proportions and assigns one allele per marker to each gamete following Mendel’s laws that govern gametogenesis.
publishDate 2020
dc.date.none.fl_str_mv 2020-01-01
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv http://old.scielo.br/scielo.php?script=sci_arttext&pid=S1984-70332020000100400
url http://old.scielo.br/scielo.php?script=sci_arttext&pid=S1984-70332020000100400
dc.language.iso.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv 10.1590/1984-70332020v20n1s9
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
eu_rights_str_mv openAccess
dc.format.none.fl_str_mv text/html
dc.publisher.none.fl_str_mv Crop Breeding and Applied Biotechnology
publisher.none.fl_str_mv Crop Breeding and Applied Biotechnology
dc.source.none.fl_str_mv Crop Breeding and Applied Biotechnology v.20 n.1 2020
reponame:Crop Breeding and Applied Biotechnology
instname:Sociedade Brasileira de Melhoramento de Plantas
instacron:CBAB
instname_str Sociedade Brasileira de Melhoramento de Plantas
instacron_str CBAB
institution CBAB
reponame_str Crop Breeding and Applied Biotechnology
collection Crop Breeding and Applied Biotechnology
repository.name.fl_str_mv Crop Breeding and Applied Biotechnology - Sociedade Brasileira de Melhoramento de Plantas
repository.mail.fl_str_mv cbabjournal@gmail.com||cbab@ufv.br
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