Genomic diversity of clinical and environmental Vibrio cholerae strains isolated in Brazil between 1991 and 2001 as revealed by fluorescent amplified fragment length polymorphism analysis

Detalhes bibliográficos
Autor(a) principal: Thompson, Fabiano L.
Data de Publicação: 2003
Outros Autores: Thompson, Cristiane C., Vicente, Ana C. P., Theophilo, Grace N. D., Hofer, Ernesto, Swings, Jean
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Institucional da FIOCRUZ (ARCA)
Texto Completo: https://www.arca.fiocruz.br/handle/icict/41140
Resumo: Acesso aberto em 06/05/2020- https://www.ncbi.nlm.nih.gov/pmc/articles/PMC154745/pdf/1760.pdf
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spelling Thompson, Fabiano L.Thompson, Cristiane C.Vicente, Ana C. P.Theophilo, Grace N. D.Hofer, ErnestoSwings, Jean2020-05-06T19:19:33Z2020-05-06T19:19:33Z2003THOMPSON, Fabiano L. et al. Genomic Diversity of Clinical and Environmental Vibrio cholerae Strains Isolated in Brazil between 1991 and 2001 as Revealed by Fluorescent Amplified Fragment Length Polymorphism Analysis. Journal of Clinical Microbiology, v. 41, n. 5, p. 1946-1950, May 2003.0095-1137https://www.arca.fiocruz.br/handle/icict/4114010.1128/jcm.41.5.1946-1950.20031098-660XAcesso aberto em 06/05/2020- https://www.ncbi.nlm.nih.gov/pmc/articles/PMC154745/pdf/1760.pdfGhent University. Laboratory for Microbiology. Ghent, Belgium / Ghent University. BCCM/LMG Bacteria Collection, Ghent, Belgium.Ghent University. Laboratory for Microbiology. Ghent, Belgium.Fundação Oswaldo Cruz. Instituto Oswaldo Cruz. Departamento de Genética. Rio de Janeiro, RJ, Brasil.Fundação Oswaldo Cruz. Instituto Oswaldo Cruz. Departamento de Bacteriologia. Rio de Janeiro, RJ, Brasil.Fundação Oswaldo Cruz. Instituto Oswaldo Cruz. Departamento de Bacteriologia. Rio de Janeiro, RJ, Brasil.Ghent University. Laboratory for Microbiology. Ghent, Belgium / Ghent University. BCCM/LMG Bacteria Collection, Ghent, Belgium.Vibrio cholerae is a ubiquitous and abundant organism in aquatic environments, particularly in coastal areas, estuaries, and rivers. This organism was the cause of a considerable number of deaths in Brazil during the last decade. In this study we applied the genomic fingerprinting technique fluorescent amplified fragment length polymorphism (FAFLP) to analyze 106 V. cholerae O1 and non-O1 and non-O139 strains isolated from clinical specimens and the environment between 1991 and 2001. Numerical analysis of the FAFLP patterns disclosed seven main groups of genomes, all of them originated from a variety of different places in different years, suggesting that V. cholerae is a very diverse species. O1 and non-O1 and non-O139 strains were distinguishable by FAFLP, although clinical and environmental strains clustered together in a few cases. The persistence of some strains of highly related genomes during several years and in completely different geographical regions suggests that these strains are highly successful in adapting to changing environmental conditions.engAmerican Society for MicrobiologyVibrio choleraeDiversidade genômicaCepasAnálise de polimorfismoFragmento amplificado fluorescenteGenomic DiversityVibrio cholerae strainsVibrio cholerae StrainPolymorphism AnalysisAmplified Fragment LengthGenomic diversity of clinical and environmental Vibrio cholerae strains isolated in Brazil between 1991 and 2001 as revealed by fluorescent amplified fragment length polymorphism analysisinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articleinfo:eu-repo/semantics/openAccessreponame:Repositório Institucional da FIOCRUZ (ARCA)instname:Fundação Oswaldo Cruz (FIOCRUZ)instacron:FIOCRUZLICENSElicense.txtlicense.txttext/plain; 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dc.title.pt_BR.fl_str_mv Genomic diversity of clinical and environmental Vibrio cholerae strains isolated in Brazil between 1991 and 2001 as revealed by fluorescent amplified fragment length polymorphism analysis
title Genomic diversity of clinical and environmental Vibrio cholerae strains isolated in Brazil between 1991 and 2001 as revealed by fluorescent amplified fragment length polymorphism analysis
spellingShingle Genomic diversity of clinical and environmental Vibrio cholerae strains isolated in Brazil between 1991 and 2001 as revealed by fluorescent amplified fragment length polymorphism analysis
Thompson, Fabiano L.
Vibrio cholerae
Diversidade genômica
Cepas
Análise de polimorfismo
Fragmento amplificado fluorescente
Genomic Diversity
Vibrio cholerae strains
Vibrio cholerae Strain
Polymorphism Analysis
Amplified Fragment Length
title_short Genomic diversity of clinical and environmental Vibrio cholerae strains isolated in Brazil between 1991 and 2001 as revealed by fluorescent amplified fragment length polymorphism analysis
title_full Genomic diversity of clinical and environmental Vibrio cholerae strains isolated in Brazil between 1991 and 2001 as revealed by fluorescent amplified fragment length polymorphism analysis
title_fullStr Genomic diversity of clinical and environmental Vibrio cholerae strains isolated in Brazil between 1991 and 2001 as revealed by fluorescent amplified fragment length polymorphism analysis
title_full_unstemmed Genomic diversity of clinical and environmental Vibrio cholerae strains isolated in Brazil between 1991 and 2001 as revealed by fluorescent amplified fragment length polymorphism analysis
title_sort Genomic diversity of clinical and environmental Vibrio cholerae strains isolated in Brazil between 1991 and 2001 as revealed by fluorescent amplified fragment length polymorphism analysis
author Thompson, Fabiano L.
author_facet Thompson, Fabiano L.
Thompson, Cristiane C.
Vicente, Ana C. P.
Theophilo, Grace N. D.
Hofer, Ernesto
Swings, Jean
author_role author
author2 Thompson, Cristiane C.
Vicente, Ana C. P.
Theophilo, Grace N. D.
Hofer, Ernesto
Swings, Jean
author2_role author
author
author
author
author
dc.contributor.author.fl_str_mv Thompson, Fabiano L.
Thompson, Cristiane C.
Vicente, Ana C. P.
Theophilo, Grace N. D.
Hofer, Ernesto
Swings, Jean
dc.subject.other.pt_BR.fl_str_mv Vibrio cholerae
Diversidade genômica
Cepas
Análise de polimorfismo
Fragmento amplificado fluorescente
topic Vibrio cholerae
Diversidade genômica
Cepas
Análise de polimorfismo
Fragmento amplificado fluorescente
Genomic Diversity
Vibrio cholerae strains
Vibrio cholerae Strain
Polymorphism Analysis
Amplified Fragment Length
dc.subject.en.pt_BR.fl_str_mv Genomic Diversity
Vibrio cholerae strains
Vibrio cholerae Strain
Polymorphism Analysis
Amplified Fragment Length
description Acesso aberto em 06/05/2020- https://www.ncbi.nlm.nih.gov/pmc/articles/PMC154745/pdf/1760.pdf
publishDate 2003
dc.date.issued.fl_str_mv 2003
dc.date.accessioned.fl_str_mv 2020-05-06T19:19:33Z
dc.date.available.fl_str_mv 2020-05-06T19:19:33Z
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
format article
status_str publishedVersion
dc.identifier.citation.fl_str_mv THOMPSON, Fabiano L. et al. Genomic Diversity of Clinical and Environmental Vibrio cholerae Strains Isolated in Brazil between 1991 and 2001 as Revealed by Fluorescent Amplified Fragment Length Polymorphism Analysis. Journal of Clinical Microbiology, v. 41, n. 5, p. 1946-1950, May 2003.
dc.identifier.uri.fl_str_mv https://www.arca.fiocruz.br/handle/icict/41140
dc.identifier.issn.pt_BR.fl_str_mv 0095-1137
dc.identifier.doi.none.fl_str_mv 10.1128/jcm.41.5.1946-1950.2003
dc.identifier.eissn.none.fl_str_mv 1098-660X
identifier_str_mv THOMPSON, Fabiano L. et al. Genomic Diversity of Clinical and Environmental Vibrio cholerae Strains Isolated in Brazil between 1991 and 2001 as Revealed by Fluorescent Amplified Fragment Length Polymorphism Analysis. Journal of Clinical Microbiology, v. 41, n. 5, p. 1946-1950, May 2003.
0095-1137
10.1128/jcm.41.5.1946-1950.2003
1098-660X
url https://www.arca.fiocruz.br/handle/icict/41140
dc.language.iso.fl_str_mv eng
language eng
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
eu_rights_str_mv openAccess
dc.publisher.none.fl_str_mv American Society for Microbiology
publisher.none.fl_str_mv American Society for Microbiology
dc.source.none.fl_str_mv reponame:Repositório Institucional da FIOCRUZ (ARCA)
instname:Fundação Oswaldo Cruz (FIOCRUZ)
instacron:FIOCRUZ
instname_str Fundação Oswaldo Cruz (FIOCRUZ)
instacron_str FIOCRUZ
institution FIOCRUZ
reponame_str Repositório Institucional da FIOCRUZ (ARCA)
collection Repositório Institucional da FIOCRUZ (ARCA)
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