Polymorphism in Litopenaeus vannamei genes and cross-species amplification in other shrimp species

Detalhes bibliográficos
Autor(a) principal: Santos, Camilla Alves
Data de Publicação: 2018
Outros Autores: Farias, Flávio, Teixeira, Ana Karina, Rocha, João Luís, Guerrelhas, Ana Carolina, Freitas, Patricia Domingues de
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Pesquisa Agropecuária Brasileira (Online)
Texto Completo: https://seer.sct.embrapa.br/index.php/pab/article/view/25128
Resumo: The objective of this work was to assess polymorphisms within Litopenaeus vannamei candidate genes related to growth performance, and a possible association between weight genotypes and phenotypes in two shrimp closed lines. Three EST-SSR (serine-arginine, 60S ribosomal, and troponin) and one EST-SNP (crustacyanin) were selected and evaluated in L. vannamei and seven other marine shrimp species, besides two freshwater species. Genotypes had no effect on total body weight. Although no association was observed in the sampled population, these markers showed amplification for most of the evaluated species and, therefore, may be useful in further genetic studies on shrimp species.
id EMBRAPA-4_0624bf9588c8cc4591f7465c00bf0dae
oai_identifier_str oai:ojs.seer.sct.embrapa.br:article/25128
network_acronym_str EMBRAPA-4
network_name_str Pesquisa Agropecuária Brasileira (Online)
repository_id_str
spelling Polymorphism in Litopenaeus vannamei genes and cross-species amplification in other shrimp speciesPolimorfismo em genes de Litopenaeus vannamei e amplificação heteróloga em outras espécies de camarãocandidate genes; crustacyanin; microsatellite; SNP; weight-association; 60S ribosomalgenes candidatos; crustacianina; microssatélite; SNP; associação à massa; 60S ribossomalThe objective of this work was to assess polymorphisms within Litopenaeus vannamei candidate genes related to growth performance, and a possible association between weight genotypes and phenotypes in two shrimp closed lines. Three EST-SSR (serine-arginine, 60S ribosomal, and troponin) and one EST-SNP (crustacyanin) were selected and evaluated in L. vannamei and seven other marine shrimp species, besides two freshwater species. Genotypes had no effect on total body weight. Although no association was observed in the sampled population, these markers showed amplification for most of the evaluated species and, therefore, may be useful in further genetic studies on shrimp species.O objetivo deste trabalho foi avaliar polimorfismos em genes candidatos de Litopenaeus vannamei relacionados ao crescimento, e uma possível associação entre genótipos e fenótipos de peso em duas linhagens fechadas de camarão. Três SSR-EST (serina-arginina, 60S ribossomal e troponina) e um SNP-EST (crustacianina) foram selecionados e avaliados em L. vannamei e sete outras espécies de camarão marinho, além de duas espécies de água doce. Os genótipos não tiveram efeito significativo sobre o peso corporal total. Embora não tenham sido observadas associações na população amostrada, esses marcadores puderam ser amplificados para a maioria das espécies avaliadas e podem ser úteis em estudos genéticos adicionais em espécies de camarão.Pesquisa Agropecuaria BrasileiraPesquisa Agropecuária BrasileiraFundação de Amparo à Pesquisa do Estado de São Paulo (Fapesp)Conselho Nacional de Desenvolvimento Científico e Tecnológico (CNPq)Coordenação de Aperfeiçoamento de Pessoal de Nível Superior (Capes)Santos, Camilla AlvesFarias, FlávioTeixeira, Ana KarinaRocha, João LuísGuerrelhas, Ana CarolinaFreitas, Patricia Domingues de2018-02-16info:eu-repo/semantics/articleinfo:eu-repo/semantics/publishedVersionapplication/pdfhttps://seer.sct.embrapa.br/index.php/pab/article/view/25128Pesquisa Agropecuaria Brasileira; v.53, n.1, jan. 2018; 121-124Pesquisa Agropecuária Brasileira; v.53, n.1, jan. 2018; 121-1241678-39210100-104xreponame:Pesquisa Agropecuária Brasileira (Online)instname:Empresa Brasileira de Pesquisa Agropecuária (Embrapa)instacron:EMBRAPAenghttps://seer.sct.embrapa.br/index.php/pab/article/view/25128/14114https://seer.sct.embrapa.br/index.php/pab/article/downloadSuppFile/25128/16927https://seer.sct.embrapa.br/index.php/pab/article/downloadSuppFile/25128/17767Direitos autorais 2018 Pesquisa Agropecuária Brasileirainfo:eu-repo/semantics/openAccess2018-02-22T15:26:42Zoai:ojs.seer.sct.embrapa.br:article/25128Revistahttp://seer.sct.embrapa.br/index.php/pabPRIhttps://old.scielo.br/oai/scielo-oai.phppab@sct.embrapa.br || sct.pab@embrapa.br1678-39210100-204Xopendoar:2018-02-22T15:26:42Pesquisa Agropecuária Brasileira (Online) - Empresa Brasileira de Pesquisa Agropecuária (Embrapa)false
dc.title.none.fl_str_mv Polymorphism in Litopenaeus vannamei genes and cross-species amplification in other shrimp species
Polimorfismo em genes de Litopenaeus vannamei e amplificação heteróloga em outras espécies de camarão
title Polymorphism in Litopenaeus vannamei genes and cross-species amplification in other shrimp species
spellingShingle Polymorphism in Litopenaeus vannamei genes and cross-species amplification in other shrimp species
Santos, Camilla Alves
candidate genes; crustacyanin; microsatellite; SNP; weight-association; 60S ribosomal
genes candidatos; crustacianina; microssatélite; SNP; associação à massa; 60S ribossomal
title_short Polymorphism in Litopenaeus vannamei genes and cross-species amplification in other shrimp species
title_full Polymorphism in Litopenaeus vannamei genes and cross-species amplification in other shrimp species
title_fullStr Polymorphism in Litopenaeus vannamei genes and cross-species amplification in other shrimp species
title_full_unstemmed Polymorphism in Litopenaeus vannamei genes and cross-species amplification in other shrimp species
title_sort Polymorphism in Litopenaeus vannamei genes and cross-species amplification in other shrimp species
author Santos, Camilla Alves
author_facet Santos, Camilla Alves
Farias, Flávio
Teixeira, Ana Karina
Rocha, João Luís
Guerrelhas, Ana Carolina
Freitas, Patricia Domingues de
author_role author
author2 Farias, Flávio
Teixeira, Ana Karina
Rocha, João Luís
Guerrelhas, Ana Carolina
Freitas, Patricia Domingues de
author2_role author
author
author
author
author
dc.contributor.none.fl_str_mv
Fundação de Amparo à Pesquisa do Estado de São Paulo (Fapesp)
Conselho Nacional de Desenvolvimento Científico e Tecnológico (CNPq)
Coordenação de Aperfeiçoamento de Pessoal de Nível Superior (Capes)
dc.contributor.author.fl_str_mv Santos, Camilla Alves
Farias, Flávio
Teixeira, Ana Karina
Rocha, João Luís
Guerrelhas, Ana Carolina
Freitas, Patricia Domingues de
dc.subject.por.fl_str_mv candidate genes; crustacyanin; microsatellite; SNP; weight-association; 60S ribosomal
genes candidatos; crustacianina; microssatélite; SNP; associação à massa; 60S ribossomal
topic candidate genes; crustacyanin; microsatellite; SNP; weight-association; 60S ribosomal
genes candidatos; crustacianina; microssatélite; SNP; associação à massa; 60S ribossomal
description The objective of this work was to assess polymorphisms within Litopenaeus vannamei candidate genes related to growth performance, and a possible association between weight genotypes and phenotypes in two shrimp closed lines. Three EST-SSR (serine-arginine, 60S ribosomal, and troponin) and one EST-SNP (crustacyanin) were selected and evaluated in L. vannamei and seven other marine shrimp species, besides two freshwater species. Genotypes had no effect on total body weight. Although no association was observed in the sampled population, these markers showed amplification for most of the evaluated species and, therefore, may be useful in further genetic studies on shrimp species.
publishDate 2018
dc.date.none.fl_str_mv 2018-02-16
dc.type.none.fl_str_mv
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
info:eu-repo/semantics/publishedVersion
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv https://seer.sct.embrapa.br/index.php/pab/article/view/25128
url https://seer.sct.embrapa.br/index.php/pab/article/view/25128
dc.language.iso.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv https://seer.sct.embrapa.br/index.php/pab/article/view/25128/14114
https://seer.sct.embrapa.br/index.php/pab/article/downloadSuppFile/25128/16927
https://seer.sct.embrapa.br/index.php/pab/article/downloadSuppFile/25128/17767
dc.rights.driver.fl_str_mv Direitos autorais 2018 Pesquisa Agropecuária Brasileira
info:eu-repo/semantics/openAccess
rights_invalid_str_mv Direitos autorais 2018 Pesquisa Agropecuária Brasileira
eu_rights_str_mv openAccess
dc.format.none.fl_str_mv application/pdf
dc.publisher.none.fl_str_mv Pesquisa Agropecuaria Brasileira
Pesquisa Agropecuária Brasileira
publisher.none.fl_str_mv Pesquisa Agropecuaria Brasileira
Pesquisa Agropecuária Brasileira
dc.source.none.fl_str_mv Pesquisa Agropecuaria Brasileira; v.53, n.1, jan. 2018; 121-124
Pesquisa Agropecuária Brasileira; v.53, n.1, jan. 2018; 121-124
1678-3921
0100-104x
reponame:Pesquisa Agropecuária Brasileira (Online)
instname:Empresa Brasileira de Pesquisa Agropecuária (Embrapa)
instacron:EMBRAPA
instname_str Empresa Brasileira de Pesquisa Agropecuária (Embrapa)
instacron_str EMBRAPA
institution EMBRAPA
reponame_str Pesquisa Agropecuária Brasileira (Online)
collection Pesquisa Agropecuária Brasileira (Online)
repository.name.fl_str_mv Pesquisa Agropecuária Brasileira (Online) - Empresa Brasileira de Pesquisa Agropecuária (Embrapa)
repository.mail.fl_str_mv pab@sct.embrapa.br || sct.pab@embrapa.br
_version_ 1793416704633602048

Registros relacionados