Genomic variability of Pantoea ananatis in maize white spot lesions assessed by AFLP markers.

Detalhes bibliográficos
Autor(a) principal: MILLER, A. M.
Data de Publicação: 2016
Outros Autores: FIGUEIREDO, J. E. F., CHAVES, C. L., RUAS, E. A., BALBI-PEÑA, M. I., COLAUTO, N. B., PACCOLA-MEIRELLES, L. D.
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice)
Texto Completo: http://www.alice.cnptia.embrapa.br/alice/handle/doc/1067524
Resumo: Measures to control maize white spot (MWS) caused by Pantoea ananatis are preferentially based on resistant cultivars. A lack of knowledge on the genetic variability of pathogens could interfere with the development and utilization of controlling strategies in this pathosystem. The main goals of this study were to investigate the genetic variability of 90 P. ananatis isolates from three different eco-geographical regions of Brazil by amplified fragment length polymorphism (AFLP), and to determine the presence of a universal P. ananatis plasmid in isolates from tropical Brazil. Analysis of genetic similarity by AFLP allowed us to categorize the 90 isolates into two groups. However, no correlation between the collecting sites and genetic groupings was observed. The polymorphism percentage found in P. ananatis ranged between 24.64 and 92.46%, and genetic diversity was calculated to be 0.07-0.09. The analysis of molecular variance showed that 99.18% of genetic variability was within the populations, providing evidence that evolutionary forces were acting on these populations. All P. ananatis isolates showed the P. ananatis universal plasmid (280 or 352 kb). This is the first report on the presence of a universal P. ananatis plasmid from MWS lesions in the tropical area.
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spelling Genomic variability of Pantoea ananatis in maize white spot lesions assessed by AFLP markers.Bactérias fitopatogênicasGenotipagem de alelosDoença de plantaMilhoPolimorfismoMeasures to control maize white spot (MWS) caused by Pantoea ananatis are preferentially based on resistant cultivars. A lack of knowledge on the genetic variability of pathogens could interfere with the development and utilization of controlling strategies in this pathosystem. The main goals of this study were to investigate the genetic variability of 90 P. ananatis isolates from three different eco-geographical regions of Brazil by amplified fragment length polymorphism (AFLP), and to determine the presence of a universal P. ananatis plasmid in isolates from tropical Brazil. Analysis of genetic similarity by AFLP allowed us to categorize the 90 isolates into two groups. However, no correlation between the collecting sites and genetic groupings was observed. The polymorphism percentage found in P. ananatis ranged between 24.64 and 92.46%, and genetic diversity was calculated to be 0.07-0.09. The analysis of molecular variance showed that 99.18% of genetic variability was within the populations, providing evidence that evolutionary forces were acting on these populations. All P. ananatis isolates showed the P. ananatis universal plasmid (280 or 352 kb). This is the first report on the presence of a universal P. ananatis plasmid from MWS lesions in the tropical area.JOSE EDSON FONTES FIGUEIREDO, CNPMS.MILLER, A. M.FIGUEIREDO, J. E. F.CHAVES, C. L.RUAS, E. A.BALBI-PEÑA, M. I.COLAUTO, N. B.PACCOLA-MEIRELLES, L. D.2017-03-23T11:11:11Z2017-03-23T11:11:11Z2017-03-2320162017-03-28T11:11:11Zinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articleGenetics and Molecular Research, Ribeirão Preto, 2016.http://www.alice.cnptia.embrapa.br/alice/handle/doc/106752410.4238/gmr.15049452enginfo:eu-repo/semantics/openAccessreponame:Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice)instname:Empresa Brasileira de Pesquisa Agropecuária (Embrapa)instacron:EMBRAPA2017-08-16T04:19:40Zoai:www.alice.cnptia.embrapa.br:doc/1067524Repositório InstitucionalPUBhttps://www.alice.cnptia.embrapa.br/oai/requestopendoar:21542017-08-16T04:19:40falseRepositório InstitucionalPUBhttps://www.alice.cnptia.embrapa.br/oai/requestcg-riaa@embrapa.bropendoar:21542017-08-16T04:19:40Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice) - Empresa Brasileira de Pesquisa Agropecuária (Embrapa)false
dc.title.none.fl_str_mv Genomic variability of Pantoea ananatis in maize white spot lesions assessed by AFLP markers.
title Genomic variability of Pantoea ananatis in maize white spot lesions assessed by AFLP markers.
spellingShingle Genomic variability of Pantoea ananatis in maize white spot lesions assessed by AFLP markers.
MILLER, A. M.
Bactérias fitopatogênicas
Genotipagem de alelos
Doença de planta
Milho
Polimorfismo
title_short Genomic variability of Pantoea ananatis in maize white spot lesions assessed by AFLP markers.
title_full Genomic variability of Pantoea ananatis in maize white spot lesions assessed by AFLP markers.
title_fullStr Genomic variability of Pantoea ananatis in maize white spot lesions assessed by AFLP markers.
title_full_unstemmed Genomic variability of Pantoea ananatis in maize white spot lesions assessed by AFLP markers.
title_sort Genomic variability of Pantoea ananatis in maize white spot lesions assessed by AFLP markers.
author MILLER, A. M.
author_facet MILLER, A. M.
FIGUEIREDO, J. E. F.
CHAVES, C. L.
RUAS, E. A.
BALBI-PEÑA, M. I.
COLAUTO, N. B.
PACCOLA-MEIRELLES, L. D.
author_role author
author2 FIGUEIREDO, J. E. F.
CHAVES, C. L.
RUAS, E. A.
BALBI-PEÑA, M. I.
COLAUTO, N. B.
PACCOLA-MEIRELLES, L. D.
author2_role author
author
author
author
author
author
dc.contributor.none.fl_str_mv JOSE EDSON FONTES FIGUEIREDO, CNPMS.
dc.contributor.author.fl_str_mv MILLER, A. M.
FIGUEIREDO, J. E. F.
CHAVES, C. L.
RUAS, E. A.
BALBI-PEÑA, M. I.
COLAUTO, N. B.
PACCOLA-MEIRELLES, L. D.
dc.subject.por.fl_str_mv Bactérias fitopatogênicas
Genotipagem de alelos
Doença de planta
Milho
Polimorfismo
topic Bactérias fitopatogênicas
Genotipagem de alelos
Doença de planta
Milho
Polimorfismo
description Measures to control maize white spot (MWS) caused by Pantoea ananatis are preferentially based on resistant cultivars. A lack of knowledge on the genetic variability of pathogens could interfere with the development and utilization of controlling strategies in this pathosystem. The main goals of this study were to investigate the genetic variability of 90 P. ananatis isolates from three different eco-geographical regions of Brazil by amplified fragment length polymorphism (AFLP), and to determine the presence of a universal P. ananatis plasmid in isolates from tropical Brazil. Analysis of genetic similarity by AFLP allowed us to categorize the 90 isolates into two groups. However, no correlation between the collecting sites and genetic groupings was observed. The polymorphism percentage found in P. ananatis ranged between 24.64 and 92.46%, and genetic diversity was calculated to be 0.07-0.09. The analysis of molecular variance showed that 99.18% of genetic variability was within the populations, providing evidence that evolutionary forces were acting on these populations. All P. ananatis isolates showed the P. ananatis universal plasmid (280 or 352 kb). This is the first report on the presence of a universal P. ananatis plasmid from MWS lesions in the tropical area.
publishDate 2016
dc.date.none.fl_str_mv 2016
2017-03-23T11:11:11Z
2017-03-23T11:11:11Z
2017-03-23
2017-03-28T11:11:11Z
dc.type.driver.fl_str_mv info:eu-repo/semantics/publishedVersion
info:eu-repo/semantics/article
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv Genetics and Molecular Research, Ribeirão Preto, 2016.
http://www.alice.cnptia.embrapa.br/alice/handle/doc/1067524
10.4238/gmr.15049452
identifier_str_mv Genetics and Molecular Research, Ribeirão Preto, 2016.
10.4238/gmr.15049452
url http://www.alice.cnptia.embrapa.br/alice/handle/doc/1067524
dc.language.iso.fl_str_mv eng
language eng
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
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dc.source.none.fl_str_mv reponame:Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice)
instname:Empresa Brasileira de Pesquisa Agropecuária (Embrapa)
instacron:EMBRAPA
instname_str Empresa Brasileira de Pesquisa Agropecuária (Embrapa)
instacron_str EMBRAPA
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reponame_str Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice)
collection Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice)
repository.name.fl_str_mv Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice) - Empresa Brasileira de Pesquisa Agropecuária (Embrapa)
repository.mail.fl_str_mv cg-riaa@embrapa.br
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