RAPD and ISSR markers in the evaluation of genetic divergence among accessions of elephant grass.

Detalhes bibliográficos
Autor(a) principal: LIMA, R. S. N. de
Data de Publicação: 2011
Outros Autores: DAHER, R. F., GONÇALVES, L. S. A., ROSSI, D. A., AMARAL JÚNIOR, A. T. do, PEREIRA, M. G., LEDO, F. J. da S.
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice)
Texto Completo: http://www.alice.cnptia.embrapa.br/alice/handle/doc/913619
https://doi.org/10.4238/vol10-3gmr1107
Resumo: Considering the expected genetic variability of elephant grass (Pennisetum purpureum), due to its cultivation in different continents, we characterized and estimated the genetic divergences between 46 accessions of elephant grass with different edaphoclimatic adaptations, using RAPD and ISSR markers. We evaluated, comparatively, the consistency of the information achieved with these markers. Twenty-six RAPD and 25 ISSR primers were employed. The RAPD markers produced 185 bands, 72% of which were polymorphic, with a mean of 5.11 polymorphic bands per primer. The 25 ISSR starters produced 216 bands; 76% were polymorphic, with a mean of 6.56 polymorphic bands per primer. The correlation between the genetic distances achieved by the RAPD and ISSR markers was 0.76, which is highly significant by the Mantel test. Based on UPGMA grouping, considering the point of sudden change, five and six groups were formed for the data from the RAPD and ISSR markers, respectively. These markers provided partially concordant groups, indicating that these techniques can provide consistent information and consequently could be used in studies of genetic diversity among accessions.
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spelling RAPD and ISSR markers in the evaluation of genetic divergence among accessions of elephant grass.Pennisetum purpureum SchumRAPD and ISSR markersGenetic variabilityConsidering the expected genetic variability of elephant grass (Pennisetum purpureum), due to its cultivation in different continents, we characterized and estimated the genetic divergences between 46 accessions of elephant grass with different edaphoclimatic adaptations, using RAPD and ISSR markers. We evaluated, comparatively, the consistency of the information achieved with these markers. Twenty-six RAPD and 25 ISSR primers were employed. The RAPD markers produced 185 bands, 72% of which were polymorphic, with a mean of 5.11 polymorphic bands per primer. The 25 ISSR starters produced 216 bands; 76% were polymorphic, with a mean of 6.56 polymorphic bands per primer. The correlation between the genetic distances achieved by the RAPD and ISSR markers was 0.76, which is highly significant by the Mantel test. Based on UPGMA grouping, considering the point of sudden change, five and six groups were formed for the data from the RAPD and ISSR markers, respectively. These markers provided partially concordant groups, indicating that these techniques can provide consistent information and consequently could be used in studies of genetic diversity among accessions.R. S. N. DE LIMA, Universidade Estadual do Norte Fluminense Darcy Ribeiro; R. F. DAHER, Universidade Estadual do Norte Fluminense Darcy Ribeiro; L. S. A. GONÇALVES, Universidade Estadual do Norte Fluminense Darcy Ribeiro; D. A. ROSSI, Universidade Estadual do Norte Fluminense Darcy Ribeiro; A. T. DO AMARAL JÚNIOR, Universidade Estadual do Norte Fluminense Darcy Ribeiro; M. G. PEREIRA, Universidade Estadual do Norte Fluminense Darcy Ribeiro; FRANCISCO JOSE DA SILVA LEDO, CNPGL.LIMA, R. S. N. deDAHER, R. F.GONÇALVES, L. S. A.ROSSI, D. A.AMARAL JÚNIOR, A. T. doPEREIRA, M. G.LEDO, F. J. da S.2024-02-06T10:41:10Z2024-02-06T10:41:10Z2012-01-262011info:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articleGenetics and Molecular Research, v. 10, n. 3, p. 1214-1223, 2011.http://www.alice.cnptia.embrapa.br/alice/handle/doc/913619https://doi.org/10.4238/vol10-3gmr1107enginfo:eu-repo/semantics/openAccessreponame:Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice)instname:Empresa Brasileira de Pesquisa Agropecuária (Embrapa)instacron:EMBRAPA2024-02-06T10:41:10Zoai:www.alice.cnptia.embrapa.br:doc/913619Repositório InstitucionalPUBhttps://www.alice.cnptia.embrapa.br/oai/requestopendoar:21542024-02-06T10:41:10falseRepositório InstitucionalPUBhttps://www.alice.cnptia.embrapa.br/oai/requestcg-riaa@embrapa.bropendoar:21542024-02-06T10:41:10Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice) - Empresa Brasileira de Pesquisa Agropecuária (Embrapa)false
dc.title.none.fl_str_mv RAPD and ISSR markers in the evaluation of genetic divergence among accessions of elephant grass.
title RAPD and ISSR markers in the evaluation of genetic divergence among accessions of elephant grass.
spellingShingle RAPD and ISSR markers in the evaluation of genetic divergence among accessions of elephant grass.
LIMA, R. S. N. de
Pennisetum purpureum Schum
RAPD and ISSR markers
Genetic variability
title_short RAPD and ISSR markers in the evaluation of genetic divergence among accessions of elephant grass.
title_full RAPD and ISSR markers in the evaluation of genetic divergence among accessions of elephant grass.
title_fullStr RAPD and ISSR markers in the evaluation of genetic divergence among accessions of elephant grass.
title_full_unstemmed RAPD and ISSR markers in the evaluation of genetic divergence among accessions of elephant grass.
title_sort RAPD and ISSR markers in the evaluation of genetic divergence among accessions of elephant grass.
author LIMA, R. S. N. de
author_facet LIMA, R. S. N. de
DAHER, R. F.
GONÇALVES, L. S. A.
ROSSI, D. A.
AMARAL JÚNIOR, A. T. do
PEREIRA, M. G.
LEDO, F. J. da S.
author_role author
author2 DAHER, R. F.
GONÇALVES, L. S. A.
ROSSI, D. A.
AMARAL JÚNIOR, A. T. do
PEREIRA, M. G.
LEDO, F. J. da S.
author2_role author
author
author
author
author
author
dc.contributor.none.fl_str_mv R. S. N. DE LIMA, Universidade Estadual do Norte Fluminense Darcy Ribeiro; R. F. DAHER, Universidade Estadual do Norte Fluminense Darcy Ribeiro; L. S. A. GONÇALVES, Universidade Estadual do Norte Fluminense Darcy Ribeiro; D. A. ROSSI, Universidade Estadual do Norte Fluminense Darcy Ribeiro; A. T. DO AMARAL JÚNIOR, Universidade Estadual do Norte Fluminense Darcy Ribeiro; M. G. PEREIRA, Universidade Estadual do Norte Fluminense Darcy Ribeiro; FRANCISCO JOSE DA SILVA LEDO, CNPGL.
dc.contributor.author.fl_str_mv LIMA, R. S. N. de
DAHER, R. F.
GONÇALVES, L. S. A.
ROSSI, D. A.
AMARAL JÚNIOR, A. T. do
PEREIRA, M. G.
LEDO, F. J. da S.
dc.subject.por.fl_str_mv Pennisetum purpureum Schum
RAPD and ISSR markers
Genetic variability
topic Pennisetum purpureum Schum
RAPD and ISSR markers
Genetic variability
description Considering the expected genetic variability of elephant grass (Pennisetum purpureum), due to its cultivation in different continents, we characterized and estimated the genetic divergences between 46 accessions of elephant grass with different edaphoclimatic adaptations, using RAPD and ISSR markers. We evaluated, comparatively, the consistency of the information achieved with these markers. Twenty-six RAPD and 25 ISSR primers were employed. The RAPD markers produced 185 bands, 72% of which were polymorphic, with a mean of 5.11 polymorphic bands per primer. The 25 ISSR starters produced 216 bands; 76% were polymorphic, with a mean of 6.56 polymorphic bands per primer. The correlation between the genetic distances achieved by the RAPD and ISSR markers was 0.76, which is highly significant by the Mantel test. Based on UPGMA grouping, considering the point of sudden change, five and six groups were formed for the data from the RAPD and ISSR markers, respectively. These markers provided partially concordant groups, indicating that these techniques can provide consistent information and consequently could be used in studies of genetic diversity among accessions.
publishDate 2011
dc.date.none.fl_str_mv 2011
2012-01-26
2024-02-06T10:41:10Z
2024-02-06T10:41:10Z
dc.type.driver.fl_str_mv info:eu-repo/semantics/publishedVersion
info:eu-repo/semantics/article
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv Genetics and Molecular Research, v. 10, n. 3, p. 1214-1223, 2011.
http://www.alice.cnptia.embrapa.br/alice/handle/doc/913619
https://doi.org/10.4238/vol10-3gmr1107
identifier_str_mv Genetics and Molecular Research, v. 10, n. 3, p. 1214-1223, 2011.
url http://www.alice.cnptia.embrapa.br/alice/handle/doc/913619
https://doi.org/10.4238/vol10-3gmr1107
dc.language.iso.fl_str_mv eng
language eng
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
eu_rights_str_mv openAccess
dc.source.none.fl_str_mv reponame:Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice)
instname:Empresa Brasileira de Pesquisa Agropecuária (Embrapa)
instacron:EMBRAPA
instname_str Empresa Brasileira de Pesquisa Agropecuária (Embrapa)
instacron_str EMBRAPA
institution EMBRAPA
reponame_str Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice)
collection Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice)
repository.name.fl_str_mv Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice) - Empresa Brasileira de Pesquisa Agropecuária (Embrapa)
repository.mail.fl_str_mv cg-riaa@embrapa.br
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