Development of microsatellite markers for Hoplias malabaricus (Erythrinidae).

Detalhes bibliográficos
Autor(a) principal: GONDIM, S. G. C. A.
Data de Publicação: 2010
Outros Autores: RESENDE, L. V., BRONDANI, R. P. V., COLLEVATTI, R. G., SILVA-JÚNIOR, N. J., PEREIRA, R. R., TELLES, M. P. C.
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice)
Texto Completo: http://www.alice.cnptia.embrapa.br/alice/handle/doc/862333
Resumo: We identified 14 microsatellite loci for the wolf fish, Hoplias malabaricus (Erythrinidae), from a genomic shotgun library. Twenty-five primers were designed, and 48 individuals of H. malabaricus from four localities of northwest Goiás, in central Brazil, were genotyped to characterize the polymorphism at each locus. Fourteen primers amplified clearly interpretable products using a single PCR protocol; six loci were polymorphic, but with a low number of alleles per locus (2 or 3). Expected heterozygosities for polymorphic loci ranged from 0.136 to 0.505. Combined paternity exclusion probability (0.638) was low and combined genetic identity (0.056) was high in studies of parentage. The low polymorphism may be due to the small microsatellite size and the large size of the motifs.
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spelling Development of microsatellite markers for Hoplias malabaricus (Erythrinidae).MicrossatéliteCerradoTrairaHoplias malabaricusMarcador molecularWe identified 14 microsatellite loci for the wolf fish, Hoplias malabaricus (Erythrinidae), from a genomic shotgun library. Twenty-five primers were designed, and 48 individuals of H. malabaricus from four localities of northwest Goiás, in central Brazil, were genotyped to characterize the polymorphism at each locus. Fourteen primers amplified clearly interpretable products using a single PCR protocol; six loci were polymorphic, but with a low number of alleles per locus (2 or 3). Expected heterozygosities for polymorphic loci ranged from 0.136 to 0.505. Combined paternity exclusion probability (0.638) was low and combined genetic identity (0.056) was high in studies of parentage. The low polymorphism may be due to the small microsatellite size and the large size of the motifs.S. G. C. A. GONDIM, UFG; L. V. RESENDE, UFG; ROSANA PEREIRA VIANELLO BRONDANI, CNPAF; R. G. COLLEVATTI, UFG; N. J. SILVA-JÚNIOR, SYSTEMA NATURAE CONSULTORIA AMBIENTAL, Goiânia; R. R. PEREIRA, UFG; M. P. C. TELLES, UFG.GONDIM, S. G. C. A.RESENDE, L. V.BRONDANI, R. P. V.COLLEVATTI, R. G.SILVA-JÚNIOR, N. J.PEREIRA, R. R.TELLES, M. P. C.2021-01-10T09:03:47Z2021-01-10T09:03:47Z2010-09-152010info:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articleGenetics and Molecular Research, v. 9, n. 3, p. 1513-1517, 2010.http://www.alice.cnptia.embrapa.br/alice/handle/doc/862333enginfo:eu-repo/semantics/openAccessreponame:Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice)instname:Empresa Brasileira de Pesquisa Agropecuária (Embrapa)instacron:EMBRAPA2021-01-10T09:03:53Zoai:www.alice.cnptia.embrapa.br:doc/862333Repositório InstitucionalPUBhttps://www.alice.cnptia.embrapa.br/oai/requestopendoar:21542021-01-10T09:03:53falseRepositório InstitucionalPUBhttps://www.alice.cnptia.embrapa.br/oai/requestcg-riaa@embrapa.bropendoar:21542021-01-10T09:03:53Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice) - Empresa Brasileira de Pesquisa Agropecuária (Embrapa)false
dc.title.none.fl_str_mv Development of microsatellite markers for Hoplias malabaricus (Erythrinidae).
title Development of microsatellite markers for Hoplias malabaricus (Erythrinidae).
spellingShingle Development of microsatellite markers for Hoplias malabaricus (Erythrinidae).
GONDIM, S. G. C. A.
Microssatélite
Cerrado
Traira
Hoplias malabaricus
Marcador molecular
title_short Development of microsatellite markers for Hoplias malabaricus (Erythrinidae).
title_full Development of microsatellite markers for Hoplias malabaricus (Erythrinidae).
title_fullStr Development of microsatellite markers for Hoplias malabaricus (Erythrinidae).
title_full_unstemmed Development of microsatellite markers for Hoplias malabaricus (Erythrinidae).
title_sort Development of microsatellite markers for Hoplias malabaricus (Erythrinidae).
author GONDIM, S. G. C. A.
author_facet GONDIM, S. G. C. A.
RESENDE, L. V.
BRONDANI, R. P. V.
COLLEVATTI, R. G.
SILVA-JÚNIOR, N. J.
PEREIRA, R. R.
TELLES, M. P. C.
author_role author
author2 RESENDE, L. V.
BRONDANI, R. P. V.
COLLEVATTI, R. G.
SILVA-JÚNIOR, N. J.
PEREIRA, R. R.
TELLES, M. P. C.
author2_role author
author
author
author
author
author
dc.contributor.none.fl_str_mv S. G. C. A. GONDIM, UFG; L. V. RESENDE, UFG; ROSANA PEREIRA VIANELLO BRONDANI, CNPAF; R. G. COLLEVATTI, UFG; N. J. SILVA-JÚNIOR, SYSTEMA NATURAE CONSULTORIA AMBIENTAL, Goiânia; R. R. PEREIRA, UFG; M. P. C. TELLES, UFG.
dc.contributor.author.fl_str_mv GONDIM, S. G. C. A.
RESENDE, L. V.
BRONDANI, R. P. V.
COLLEVATTI, R. G.
SILVA-JÚNIOR, N. J.
PEREIRA, R. R.
TELLES, M. P. C.
dc.subject.por.fl_str_mv Microssatélite
Cerrado
Traira
Hoplias malabaricus
Marcador molecular
topic Microssatélite
Cerrado
Traira
Hoplias malabaricus
Marcador molecular
description We identified 14 microsatellite loci for the wolf fish, Hoplias malabaricus (Erythrinidae), from a genomic shotgun library. Twenty-five primers were designed, and 48 individuals of H. malabaricus from four localities of northwest Goiás, in central Brazil, were genotyped to characterize the polymorphism at each locus. Fourteen primers amplified clearly interpretable products using a single PCR protocol; six loci were polymorphic, but with a low number of alleles per locus (2 or 3). Expected heterozygosities for polymorphic loci ranged from 0.136 to 0.505. Combined paternity exclusion probability (0.638) was low and combined genetic identity (0.056) was high in studies of parentage. The low polymorphism may be due to the small microsatellite size and the large size of the motifs.
publishDate 2010
dc.date.none.fl_str_mv 2010-09-15
2010
2021-01-10T09:03:47Z
2021-01-10T09:03:47Z
dc.type.driver.fl_str_mv info:eu-repo/semantics/publishedVersion
info:eu-repo/semantics/article
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv Genetics and Molecular Research, v. 9, n. 3, p. 1513-1517, 2010.
http://www.alice.cnptia.embrapa.br/alice/handle/doc/862333
identifier_str_mv Genetics and Molecular Research, v. 9, n. 3, p. 1513-1517, 2010.
url http://www.alice.cnptia.embrapa.br/alice/handle/doc/862333
dc.language.iso.fl_str_mv eng
language eng
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
eu_rights_str_mv openAccess
dc.source.none.fl_str_mv reponame:Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice)
instname:Empresa Brasileira de Pesquisa Agropecuária (Embrapa)
instacron:EMBRAPA
instname_str Empresa Brasileira de Pesquisa Agropecuária (Embrapa)
instacron_str EMBRAPA
institution EMBRAPA
reponame_str Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice)
collection Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice)
repository.name.fl_str_mv Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice) - Empresa Brasileira de Pesquisa Agropecuária (Embrapa)
repository.mail.fl_str_mv cg-riaa@embrapa.br
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