Molecular characterization and sequence analysis of four Brazilian rice stripe necrosis virus isolates.

Detalhes bibliográficos
Autor(a) principal: SOUZA, D. D. de
Data de Publicação: 2021
Outros Autores: QUEIROZ, A. P. de, PEREIRA, F. S., DIANESE, E. de C., FAJARDO, T. V. M., NHANI JUNIOR, A., LAU, D., SILVA, L. A. da, RIBEIRO, B. M., COELHO, A. S. G., AGUIAR, R. W. de S., MELLO, R. N. de, SILVA, F. N. da
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice)
Texto Completo: http://www.alice.cnptia.embrapa.br/alice/handle/doc/1132710
https://doi.org/10.1007/s00705-021-05037-7
Resumo: Rice (Oryza sativa L.) is an important food crop for humanity, being cultivated in tropical and temperate regions of the world. This study reports the nearly complete genome sequences of four Brazilian rice stripe necrosis virus (RSNV) isolates. The nucleotide sequences of the RNA1 and RNA2 genome segments of these Brazilian isolates were 96.5 to 99.9% identical, indicating their close phylogenetic relationship to each other. Phylogeny and recombination analysis indicated that the genome of one of the isolates consisted of RNA segments of different origins, suggesting that a reassortment event had occurred.
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spelling Molecular characterization and sequence analysis of four Brazilian rice stripe necrosis virus isolates.Rice stripe necrosis virus (RSNV)Sequência genômicaArrozOryza SativaFilogeniaRecombinaçãoRiceRice stripe virusPhylogenyGenetic recombinationRice (Oryza sativa L.) is an important food crop for humanity, being cultivated in tropical and temperate regions of the world. This study reports the nearly complete genome sequences of four Brazilian rice stripe necrosis virus (RSNV) isolates. The nucleotide sequences of the RNA1 and RNA2 genome segments of these Brazilian isolates were 96.5 to 99.9% identical, indicating their close phylogenetic relationship to each other. Phylogeny and recombination analysis indicated that the genome of one of the isolates consisted of RNA segments of different origins, suggesting that a reassortment event had occurred.DANIELA DOMINGOS DE SOUZA, UFG; ANANIAS PINTO DE QUEIROZ, UFT; FERNANDO SARTORI PEREIRA, UDESC; ÉRICO DE CAMPOS DIANESE, UFG; THOR VINICIUS MARTINS FAJARDO, CNPUV; ANTONIO NHANI JUNIOR, CNPTIA; DOUGLAS LAU, CNPT; LEONARDO ASSIS DA SILVA, UnB; BERGMANN MORAIS RIBEIRO, UnB; ALEXANDRE SIQUEIRA GUEDES COELHO, UFG; RAIMUNDO WAGNER DE SOUZA AGUIAR, UFT; RAQUEL NEVES DE MELLO, CNPAF; FABIO NASCIMENTO DA SILVA, UDESC.SOUZA, D. D. deQUEIROZ, A. P. dePEREIRA, F. S.DIANESE, E. de C.FAJARDO, T. V. M.NHANI JUNIOR, A.LAU, D.SILVA, L. A. daRIBEIRO, B. M.COELHO, A. S. G.AGUIAR, R. W. de S.MELLO, R. N. deSILVA, F. N. da2021-07-01T15:00:56Z2021-07-01T15:00:56Z2021-07-012021info:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articleArchives of Virology, v. 166, n. 6, p. 1763-1767, June 2021.http://www.alice.cnptia.embrapa.br/alice/handle/doc/1132710https://doi.org/10.1007/s00705-021-05037-7enginfo:eu-repo/semantics/openAccessreponame:Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice)instname:Empresa Brasileira de Pesquisa Agropecuária (Embrapa)instacron:EMBRAPA2021-07-01T15:01:05Zoai:www.alice.cnptia.embrapa.br:doc/1132710Repositório InstitucionalPUBhttps://www.alice.cnptia.embrapa.br/oai/requestopendoar:21542021-07-01T15:01:05falseRepositório InstitucionalPUBhttps://www.alice.cnptia.embrapa.br/oai/requestcg-riaa@embrapa.bropendoar:21542021-07-01T15:01:05Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice) - Empresa Brasileira de Pesquisa Agropecuária (Embrapa)false
dc.title.none.fl_str_mv Molecular characterization and sequence analysis of four Brazilian rice stripe necrosis virus isolates.
title Molecular characterization and sequence analysis of four Brazilian rice stripe necrosis virus isolates.
spellingShingle Molecular characterization and sequence analysis of four Brazilian rice stripe necrosis virus isolates.
SOUZA, D. D. de
Rice stripe necrosis virus (RSNV)
Sequência genômica
Arroz
Oryza Sativa
Filogenia
Recombinação
Rice
Rice stripe virus
Phylogeny
Genetic recombination
title_short Molecular characterization and sequence analysis of four Brazilian rice stripe necrosis virus isolates.
title_full Molecular characterization and sequence analysis of four Brazilian rice stripe necrosis virus isolates.
title_fullStr Molecular characterization and sequence analysis of four Brazilian rice stripe necrosis virus isolates.
title_full_unstemmed Molecular characterization and sequence analysis of four Brazilian rice stripe necrosis virus isolates.
title_sort Molecular characterization and sequence analysis of four Brazilian rice stripe necrosis virus isolates.
author SOUZA, D. D. de
author_facet SOUZA, D. D. de
QUEIROZ, A. P. de
PEREIRA, F. S.
DIANESE, E. de C.
FAJARDO, T. V. M.
NHANI JUNIOR, A.
LAU, D.
SILVA, L. A. da
RIBEIRO, B. M.
COELHO, A. S. G.
AGUIAR, R. W. de S.
MELLO, R. N. de
SILVA, F. N. da
author_role author
author2 QUEIROZ, A. P. de
PEREIRA, F. S.
DIANESE, E. de C.
FAJARDO, T. V. M.
NHANI JUNIOR, A.
LAU, D.
SILVA, L. A. da
RIBEIRO, B. M.
COELHO, A. S. G.
AGUIAR, R. W. de S.
MELLO, R. N. de
SILVA, F. N. da
author2_role author
author
author
author
author
author
author
author
author
author
author
author
dc.contributor.none.fl_str_mv DANIELA DOMINGOS DE SOUZA, UFG; ANANIAS PINTO DE QUEIROZ, UFT; FERNANDO SARTORI PEREIRA, UDESC; ÉRICO DE CAMPOS DIANESE, UFG; THOR VINICIUS MARTINS FAJARDO, CNPUV; ANTONIO NHANI JUNIOR, CNPTIA; DOUGLAS LAU, CNPT; LEONARDO ASSIS DA SILVA, UnB; BERGMANN MORAIS RIBEIRO, UnB; ALEXANDRE SIQUEIRA GUEDES COELHO, UFG; RAIMUNDO WAGNER DE SOUZA AGUIAR, UFT; RAQUEL NEVES DE MELLO, CNPAF; FABIO NASCIMENTO DA SILVA, UDESC.
dc.contributor.author.fl_str_mv SOUZA, D. D. de
QUEIROZ, A. P. de
PEREIRA, F. S.
DIANESE, E. de C.
FAJARDO, T. V. M.
NHANI JUNIOR, A.
LAU, D.
SILVA, L. A. da
RIBEIRO, B. M.
COELHO, A. S. G.
AGUIAR, R. W. de S.
MELLO, R. N. de
SILVA, F. N. da
dc.subject.por.fl_str_mv Rice stripe necrosis virus (RSNV)
Sequência genômica
Arroz
Oryza Sativa
Filogenia
Recombinação
Rice
Rice stripe virus
Phylogeny
Genetic recombination
topic Rice stripe necrosis virus (RSNV)
Sequência genômica
Arroz
Oryza Sativa
Filogenia
Recombinação
Rice
Rice stripe virus
Phylogeny
Genetic recombination
description Rice (Oryza sativa L.) is an important food crop for humanity, being cultivated in tropical and temperate regions of the world. This study reports the nearly complete genome sequences of four Brazilian rice stripe necrosis virus (RSNV) isolates. The nucleotide sequences of the RNA1 and RNA2 genome segments of these Brazilian isolates were 96.5 to 99.9% identical, indicating their close phylogenetic relationship to each other. Phylogeny and recombination analysis indicated that the genome of one of the isolates consisted of RNA segments of different origins, suggesting that a reassortment event had occurred.
publishDate 2021
dc.date.none.fl_str_mv 2021-07-01T15:00:56Z
2021-07-01T15:00:56Z
2021-07-01
2021
dc.type.driver.fl_str_mv info:eu-repo/semantics/publishedVersion
info:eu-repo/semantics/article
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv Archives of Virology, v. 166, n. 6, p. 1763-1767, June 2021.
http://www.alice.cnptia.embrapa.br/alice/handle/doc/1132710
https://doi.org/10.1007/s00705-021-05037-7
identifier_str_mv Archives of Virology, v. 166, n. 6, p. 1763-1767, June 2021.
url http://www.alice.cnptia.embrapa.br/alice/handle/doc/1132710
https://doi.org/10.1007/s00705-021-05037-7
dc.language.iso.fl_str_mv eng
language eng
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
eu_rights_str_mv openAccess
dc.source.none.fl_str_mv reponame:Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice)
instname:Empresa Brasileira de Pesquisa Agropecuária (Embrapa)
instacron:EMBRAPA
instname_str Empresa Brasileira de Pesquisa Agropecuária (Embrapa)
instacron_str EMBRAPA
institution EMBRAPA
reponame_str Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice)
collection Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice)
repository.name.fl_str_mv Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice) - Empresa Brasileira de Pesquisa Agropecuária (Embrapa)
repository.mail.fl_str_mv cg-riaa@embrapa.br
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