Arbuscular mycorrhizal fungal diversity in rhizosphere spores versus roots of an endangered endemic tree from Argentina: is fungal diversity similar among forest disturbance types?

Detalhes bibliográficos
Autor(a) principal: SOTERAS, F.
Data de Publicação: 2015
Outros Autores: MOREIRA, B. C., GRILLI, G., PASTOR, N., MENDES, F. C., MENDES, D. R., RENISON, D., KASUYA, M. C. M., SOUZA, F. A. de, BECERRA, A.
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice)
Texto Completo: http://www.alice.cnptia.embrapa.br/alice/handle/doc/1030787
Resumo: The aim of this study was to compare the arbuscular mycorrhizal fungal (AMF) community of the rhizosphere and inside the roots of the perennial Polylepis australis tree. Three forest types differing in their structural complexity due to anthropogenic disturbances were chosen at three different sites at the high mountains of central Argentina. Rhizosphere spores and P. australis roots of four randomly selected trees were isolated from 36 soil samples, DNA was extracted and the 18S rDNA fragments were amplified by nested-PCR. The products were analyzed by DGGE and the bands were excised for sequencing. In total, 36 OTUs were defined from 56 DGGE bands successfully sequenced. Forest disturbance types showed similar communities of AMF, as rhizosphere spores and within the roots of P. australis. However, DGGE clustering showed mainly differences between rhizosphere spores and root-colonizing AMF. Members of Glomeraceae, Pacisporaceae, Acaulosporaceae and Gigasporaceae were shown in rhizosphere spore samples. Root samples showed only members of Acaulosporaceae and Gigasporaceae, which might be complementary in terms of soil resources exploration. The prevalence of the root system with their community of symbionts might explain the resilience of AMF soil communities to forests structural changes. This study presents evidence of a possible preference in the AMF?P. australis interaction
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spelling Arbuscular mycorrhizal fungal diversity in rhizosphere spores versus roots of an endangered endemic tree from Argentina: is fungal diversity similar among forest disturbance types?MicorrizaFungoRizosferaÁrvoreThe aim of this study was to compare the arbuscular mycorrhizal fungal (AMF) community of the rhizosphere and inside the roots of the perennial Polylepis australis tree. Three forest types differing in their structural complexity due to anthropogenic disturbances were chosen at three different sites at the high mountains of central Argentina. Rhizosphere spores and P. australis roots of four randomly selected trees were isolated from 36 soil samples, DNA was extracted and the 18S rDNA fragments were amplified by nested-PCR. The products were analyzed by DGGE and the bands were excised for sequencing. In total, 36 OTUs were defined from 56 DGGE bands successfully sequenced. Forest disturbance types showed similar communities of AMF, as rhizosphere spores and within the roots of P. australis. However, DGGE clustering showed mainly differences between rhizosphere spores and root-colonizing AMF. Members of Glomeraceae, Pacisporaceae, Acaulosporaceae and Gigasporaceae were shown in rhizosphere spore samples. Root samples showed only members of Acaulosporaceae and Gigasporaceae, which might be complementary in terms of soil resources exploration. The prevalence of the root system with their community of symbionts might explain the resilience of AMF soil communities to forests structural changes. This study presents evidence of a possible preference in the AMF?P. australis interactionFRANCISCO ADRIANO DE SOUZA, CNPMS.SOTERAS, F.MOREIRA, B. C.GRILLI, G.PASTOR, N.MENDES, F. C.MENDES, D. R.RENISON, D.KASUYA, M. C. M.SOUZA, F. A. deBECERRA, A.2017-06-06T23:53:59Z2017-06-06T23:53:59Z2015-12-0720162017-09-26T11:11:11Zinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articleApplied Soil Ecology, Amsterdam, v. 98, p. 272-277, 2016.http://www.alice.cnptia.embrapa.br/alice/handle/doc/103078710.1016/j.apsoil.2015.09.003enginfo:eu-repo/semantics/openAccessreponame:Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice)instname:Empresa Brasileira de Pesquisa Agropecuária (Embrapa)instacron:EMBRAPA2017-08-16T04:30:44Zoai:www.alice.cnptia.embrapa.br:doc/1030787Repositório InstitucionalPUBhttps://www.alice.cnptia.embrapa.br/oai/requestopendoar:21542017-08-16T04:30:44falseRepositório InstitucionalPUBhttps://www.alice.cnptia.embrapa.br/oai/requestcg-riaa@embrapa.bropendoar:21542017-08-16T04:30:44Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice) - Empresa Brasileira de Pesquisa Agropecuária (Embrapa)false
dc.title.none.fl_str_mv Arbuscular mycorrhizal fungal diversity in rhizosphere spores versus roots of an endangered endemic tree from Argentina: is fungal diversity similar among forest disturbance types?
title Arbuscular mycorrhizal fungal diversity in rhizosphere spores versus roots of an endangered endemic tree from Argentina: is fungal diversity similar among forest disturbance types?
spellingShingle Arbuscular mycorrhizal fungal diversity in rhizosphere spores versus roots of an endangered endemic tree from Argentina: is fungal diversity similar among forest disturbance types?
SOTERAS, F.
Micorriza
Fungo
Rizosfera
Árvore
title_short Arbuscular mycorrhizal fungal diversity in rhizosphere spores versus roots of an endangered endemic tree from Argentina: is fungal diversity similar among forest disturbance types?
title_full Arbuscular mycorrhizal fungal diversity in rhizosphere spores versus roots of an endangered endemic tree from Argentina: is fungal diversity similar among forest disturbance types?
title_fullStr Arbuscular mycorrhizal fungal diversity in rhizosphere spores versus roots of an endangered endemic tree from Argentina: is fungal diversity similar among forest disturbance types?
title_full_unstemmed Arbuscular mycorrhizal fungal diversity in rhizosphere spores versus roots of an endangered endemic tree from Argentina: is fungal diversity similar among forest disturbance types?
title_sort Arbuscular mycorrhizal fungal diversity in rhizosphere spores versus roots of an endangered endemic tree from Argentina: is fungal diversity similar among forest disturbance types?
author SOTERAS, F.
author_facet SOTERAS, F.
MOREIRA, B. C.
GRILLI, G.
PASTOR, N.
MENDES, F. C.
MENDES, D. R.
RENISON, D.
KASUYA, M. C. M.
SOUZA, F. A. de
BECERRA, A.
author_role author
author2 MOREIRA, B. C.
GRILLI, G.
PASTOR, N.
MENDES, F. C.
MENDES, D. R.
RENISON, D.
KASUYA, M. C. M.
SOUZA, F. A. de
BECERRA, A.
author2_role author
author
author
author
author
author
author
author
author
dc.contributor.none.fl_str_mv FRANCISCO ADRIANO DE SOUZA, CNPMS.
dc.contributor.author.fl_str_mv SOTERAS, F.
MOREIRA, B. C.
GRILLI, G.
PASTOR, N.
MENDES, F. C.
MENDES, D. R.
RENISON, D.
KASUYA, M. C. M.
SOUZA, F. A. de
BECERRA, A.
dc.subject.por.fl_str_mv Micorriza
Fungo
Rizosfera
Árvore
topic Micorriza
Fungo
Rizosfera
Árvore
description The aim of this study was to compare the arbuscular mycorrhizal fungal (AMF) community of the rhizosphere and inside the roots of the perennial Polylepis australis tree. Three forest types differing in their structural complexity due to anthropogenic disturbances were chosen at three different sites at the high mountains of central Argentina. Rhizosphere spores and P. australis roots of four randomly selected trees were isolated from 36 soil samples, DNA was extracted and the 18S rDNA fragments were amplified by nested-PCR. The products were analyzed by DGGE and the bands were excised for sequencing. In total, 36 OTUs were defined from 56 DGGE bands successfully sequenced. Forest disturbance types showed similar communities of AMF, as rhizosphere spores and within the roots of P. australis. However, DGGE clustering showed mainly differences between rhizosphere spores and root-colonizing AMF. Members of Glomeraceae, Pacisporaceae, Acaulosporaceae and Gigasporaceae were shown in rhizosphere spore samples. Root samples showed only members of Acaulosporaceae and Gigasporaceae, which might be complementary in terms of soil resources exploration. The prevalence of the root system with their community of symbionts might explain the resilience of AMF soil communities to forests structural changes. This study presents evidence of a possible preference in the AMF?P. australis interaction
publishDate 2015
dc.date.none.fl_str_mv 2015-12-07
2016
2017-06-06T23:53:59Z
2017-06-06T23:53:59Z
2017-09-26T11:11:11Z
dc.type.driver.fl_str_mv info:eu-repo/semantics/publishedVersion
info:eu-repo/semantics/article
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv Applied Soil Ecology, Amsterdam, v. 98, p. 272-277, 2016.
http://www.alice.cnptia.embrapa.br/alice/handle/doc/1030787
10.1016/j.apsoil.2015.09.003
identifier_str_mv Applied Soil Ecology, Amsterdam, v. 98, p. 272-277, 2016.
10.1016/j.apsoil.2015.09.003
url http://www.alice.cnptia.embrapa.br/alice/handle/doc/1030787
dc.language.iso.fl_str_mv eng
language eng
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
eu_rights_str_mv openAccess
dc.source.none.fl_str_mv reponame:Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice)
instname:Empresa Brasileira de Pesquisa Agropecuária (Embrapa)
instacron:EMBRAPA
instname_str Empresa Brasileira de Pesquisa Agropecuária (Embrapa)
instacron_str EMBRAPA
institution EMBRAPA
reponame_str Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice)
collection Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice)
repository.name.fl_str_mv Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice) - Empresa Brasileira de Pesquisa Agropecuária (Embrapa)
repository.mail.fl_str_mv cg-riaa@embrapa.br
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