Genome introgression of Híbrido de Timor and its potential to develop high cup quality C. arabica cultivars.

Detalhes bibliográficos
Autor(a) principal: SETOTAW, T. A.
Data de Publicação: 2020
Outros Autores: CAIXETA, E. T., ZAMBOLIM, E. M., SOUSA, T. V., PEREIRA, A. A., OLIVEIRA, A. C. B. de, CRUZ, C. D., ZAMBOLIM, L., SAKYAMA, N. S.
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice)
Texto Completo: http://www.alice.cnptia.embrapa.br/alice/handle/doc/1125339
Resumo: Híbrido de Timor is the principal source for disease and pest resistance genes in C. arabica breeding program worldwide. The part of the chromosome responsible for resistance introgressed from C. canephora to Híbrido de Timor are claimed to affect the cup quality of the C. arabica cultivars derived from the crossing program of Híbrido de Timor. Therefore, this work was done to study the genome introgression of Híbrido de Timor and its impact on the cup quality on the C. arabica cultivars. For genome introgression and genetic relationship analysis, seventy-six accessions from C. arabica, C. canephora and Híbrido de Timor were analyzed using AFLP and SSR molecular markers. To understand the effect of genome introgressed from Híbrido de Timor on cup quality, three C. arabica, seven Híbrido de Timor and six cultivars derived from Híbrido de Timor × C. arabica were genotyped using SSR molecular markers and sensorial analysis was performed. The genetic diversity analysis among the tested genotypes showed high genetic similarity between Híbrido de Timor with C. arabica and clear differentiation among coffee species. The analysis of genome introgression of C. arabica and C. canephora var Robusta into Híbrido de Timor not reach 30% of C. canephora genome. The sensorial analysis of coffee genotypes demonstrated non-significant difference on cup quality parameters among C. arabica cv Bourbon and cultivars derived from Híbrido de Timor that showed the possibility of developing C. arabica cultivars without affecting the cup quality. Similarly, the SSR marker diversity showed high genetic similarity between the Bourbon and the C. arabica cultivars derived from Híbrido de Timor.
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spelling Genome introgression of Híbrido de Timor and its potential to develop high cup quality C. arabica cultivars.Molecular markersBayesian modelGenetic diversityCoffee qualityCoffee (beverage)Bayesian theoryDisease resistanceHíbrido de Timor is the principal source for disease and pest resistance genes in C. arabica breeding program worldwide. The part of the chromosome responsible for resistance introgressed from C. canephora to Híbrido de Timor are claimed to affect the cup quality of the C. arabica cultivars derived from the crossing program of Híbrido de Timor. Therefore, this work was done to study the genome introgression of Híbrido de Timor and its impact on the cup quality on the C. arabica cultivars. For genome introgression and genetic relationship analysis, seventy-six accessions from C. arabica, C. canephora and Híbrido de Timor were analyzed using AFLP and SSR molecular markers. To understand the effect of genome introgressed from Híbrido de Timor on cup quality, three C. arabica, seven Híbrido de Timor and six cultivars derived from Híbrido de Timor × C. arabica were genotyped using SSR molecular markers and sensorial analysis was performed. The genetic diversity analysis among the tested genotypes showed high genetic similarity between Híbrido de Timor with C. arabica and clear differentiation among coffee species. The analysis of genome introgression of C. arabica and C. canephora var Robusta into Híbrido de Timor not reach 30% of C. canephora genome. The sensorial analysis of coffee genotypes demonstrated non-significant difference on cup quality parameters among C. arabica cv Bourbon and cultivars derived from Híbrido de Timor that showed the possibility of developing C. arabica cultivars without affecting the cup quality. Similarly, the SSR marker diversity showed high genetic similarity between the Bourbon and the C. arabica cultivars derived from Híbrido de Timor.TESFAHUN ALEMU SETOTAW, UNIVERSIDADE FEDERAL DE VIÇOSA; EVELINE TEIXEIRA CAIXETA MOURA, CNPCa; EUNIZE MACIEL ZAMBOLIM, UNIVERSIDADE FEDERAL DE VIÇOSA; TIAGO VIEIRA SOUSA, UNIVERSIDADE FEDERAL DE VIÇOSA; ANTÔNIO ALVES PEREIRA, EPAMIG; ANTONIO CARLOS BAIAO DE OLIVEIRA, CNPCa; COSME DAMIÃO CRUZ, UNIVERSIDADE FEDERAL DE VIÇOSA; LAÉRCIO ZAMBOLIM, UNIVERSIDADE FEDERAL DE VIÇOSA; NEY SUSSUMU SAKIYAMA, UNIVERSIDADE FEDERAL DE VIÇOSA.SETOTAW, T. A.CAIXETA, E. T.ZAMBOLIM, E. M.SOUSA, T. V.PEREIRA, A. A.OLIVEIRA, A. C. B. deCRUZ, C. D.ZAMBOLIM, L.SAKYAMA, N. S.2020-10-08T09:14:01Z2020-10-08T09:14:01Z2020-10-072020info:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articleJournal of Agricultural Science, v. 12, n. 4, p. 64-76, 2020.E-ISSN 1916-9760http://www.alice.cnptia.embrapa.br/alice/handle/doc/112533910.5539/jas.v12n4p64enginfo:eu-repo/semantics/openAccessreponame:Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice)instname:Empresa Brasileira de Pesquisa Agropecuária (Embrapa)instacron:EMBRAPA2020-10-08T09:14:08Zoai:www.alice.cnptia.embrapa.br:doc/1125339Repositório InstitucionalPUBhttps://www.alice.cnptia.embrapa.br/oai/requestopendoar:21542020-10-08T09:14:08falseRepositório InstitucionalPUBhttps://www.alice.cnptia.embrapa.br/oai/requestcg-riaa@embrapa.bropendoar:21542020-10-08T09:14:08Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice) - Empresa Brasileira de Pesquisa Agropecuária (Embrapa)false
dc.title.none.fl_str_mv Genome introgression of Híbrido de Timor and its potential to develop high cup quality C. arabica cultivars.
title Genome introgression of Híbrido de Timor and its potential to develop high cup quality C. arabica cultivars.
spellingShingle Genome introgression of Híbrido de Timor and its potential to develop high cup quality C. arabica cultivars.
SETOTAW, T. A.
Molecular markers
Bayesian model
Genetic diversity
Coffee quality
Coffee (beverage)
Bayesian theory
Disease resistance
title_short Genome introgression of Híbrido de Timor and its potential to develop high cup quality C. arabica cultivars.
title_full Genome introgression of Híbrido de Timor and its potential to develop high cup quality C. arabica cultivars.
title_fullStr Genome introgression of Híbrido de Timor and its potential to develop high cup quality C. arabica cultivars.
title_full_unstemmed Genome introgression of Híbrido de Timor and its potential to develop high cup quality C. arabica cultivars.
title_sort Genome introgression of Híbrido de Timor and its potential to develop high cup quality C. arabica cultivars.
author SETOTAW, T. A.
author_facet SETOTAW, T. A.
CAIXETA, E. T.
ZAMBOLIM, E. M.
SOUSA, T. V.
PEREIRA, A. A.
OLIVEIRA, A. C. B. de
CRUZ, C. D.
ZAMBOLIM, L.
SAKYAMA, N. S.
author_role author
author2 CAIXETA, E. T.
ZAMBOLIM, E. M.
SOUSA, T. V.
PEREIRA, A. A.
OLIVEIRA, A. C. B. de
CRUZ, C. D.
ZAMBOLIM, L.
SAKYAMA, N. S.
author2_role author
author
author
author
author
author
author
author
dc.contributor.none.fl_str_mv TESFAHUN ALEMU SETOTAW, UNIVERSIDADE FEDERAL DE VIÇOSA; EVELINE TEIXEIRA CAIXETA MOURA, CNPCa; EUNIZE MACIEL ZAMBOLIM, UNIVERSIDADE FEDERAL DE VIÇOSA; TIAGO VIEIRA SOUSA, UNIVERSIDADE FEDERAL DE VIÇOSA; ANTÔNIO ALVES PEREIRA, EPAMIG; ANTONIO CARLOS BAIAO DE OLIVEIRA, CNPCa; COSME DAMIÃO CRUZ, UNIVERSIDADE FEDERAL DE VIÇOSA; LAÉRCIO ZAMBOLIM, UNIVERSIDADE FEDERAL DE VIÇOSA; NEY SUSSUMU SAKIYAMA, UNIVERSIDADE FEDERAL DE VIÇOSA.
dc.contributor.author.fl_str_mv SETOTAW, T. A.
CAIXETA, E. T.
ZAMBOLIM, E. M.
SOUSA, T. V.
PEREIRA, A. A.
OLIVEIRA, A. C. B. de
CRUZ, C. D.
ZAMBOLIM, L.
SAKYAMA, N. S.
dc.subject.por.fl_str_mv Molecular markers
Bayesian model
Genetic diversity
Coffee quality
Coffee (beverage)
Bayesian theory
Disease resistance
topic Molecular markers
Bayesian model
Genetic diversity
Coffee quality
Coffee (beverage)
Bayesian theory
Disease resistance
description Híbrido de Timor is the principal source for disease and pest resistance genes in C. arabica breeding program worldwide. The part of the chromosome responsible for resistance introgressed from C. canephora to Híbrido de Timor are claimed to affect the cup quality of the C. arabica cultivars derived from the crossing program of Híbrido de Timor. Therefore, this work was done to study the genome introgression of Híbrido de Timor and its impact on the cup quality on the C. arabica cultivars. For genome introgression and genetic relationship analysis, seventy-six accessions from C. arabica, C. canephora and Híbrido de Timor were analyzed using AFLP and SSR molecular markers. To understand the effect of genome introgressed from Híbrido de Timor on cup quality, three C. arabica, seven Híbrido de Timor and six cultivars derived from Híbrido de Timor × C. arabica were genotyped using SSR molecular markers and sensorial analysis was performed. The genetic diversity analysis among the tested genotypes showed high genetic similarity between Híbrido de Timor with C. arabica and clear differentiation among coffee species. The analysis of genome introgression of C. arabica and C. canephora var Robusta into Híbrido de Timor not reach 30% of C. canephora genome. The sensorial analysis of coffee genotypes demonstrated non-significant difference on cup quality parameters among C. arabica cv Bourbon and cultivars derived from Híbrido de Timor that showed the possibility of developing C. arabica cultivars without affecting the cup quality. Similarly, the SSR marker diversity showed high genetic similarity between the Bourbon and the C. arabica cultivars derived from Híbrido de Timor.
publishDate 2020
dc.date.none.fl_str_mv 2020-10-08T09:14:01Z
2020-10-08T09:14:01Z
2020-10-07
2020
dc.type.driver.fl_str_mv info:eu-repo/semantics/publishedVersion
info:eu-repo/semantics/article
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv Journal of Agricultural Science, v. 12, n. 4, p. 64-76, 2020.
E-ISSN 1916-9760
http://www.alice.cnptia.embrapa.br/alice/handle/doc/1125339
10.5539/jas.v12n4p64
identifier_str_mv Journal of Agricultural Science, v. 12, n. 4, p. 64-76, 2020.
E-ISSN 1916-9760
10.5539/jas.v12n4p64
url http://www.alice.cnptia.embrapa.br/alice/handle/doc/1125339
dc.language.iso.fl_str_mv eng
language eng
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
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instname:Empresa Brasileira de Pesquisa Agropecuária (Embrapa)
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instname_str Empresa Brasileira de Pesquisa Agropecuária (Embrapa)
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collection Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice)
repository.name.fl_str_mv Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice) - Empresa Brasileira de Pesquisa Agropecuária (Embrapa)
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